RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 SKILP12757 684 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 POLD1P28340 1107 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 GBP1P32455 592 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
SIM1-202ENST00000369208 LACTBP83111 547 aaPredicted RBP11.55□□□□□ -0.56
SIM1-202ENST00000369208 CKAP4Q07065 602 aaKnown RBP11.55□□□□□ -0.56
SIM1-202ENST00000369208 CCDC114Q96M63 670 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 ARFGAP2Q8N6H7 521 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 ZNF644Q9H582 1327 aaPredicted RBP11.55□□□□□ -0.56
SIM1-202ENST00000369208 MAP3K12Q12852 859 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 CDC5LQ99459 802 aaKnown RBP11.55□□□□□ -0.56
SIM1-202ENST00000369208 CLIP2Q9UDT6 1046 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 HSF2BPO75031 334 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 IFFO1Q0D2I5 559 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 RNF41Q9H4P4 317 aaPredicted RBP11.55□□□□□ -0.56
SIM1-202ENST00000369208 FCHSD2O94868 740 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 ADAMTS2O95450 1211 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 ZSCAN26Q16670 478 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 AACSQ86V21 672 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 TAX1BP1Q86VP1 789 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 DTNBP1Q96EV8 351 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 JRKLQ9Y4A0 524 aa11.55□□□□□ -0.56
SIM1-202ENST00000369208 TEX14Q8IWB6 1497 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.54□□□□□ -0.56
SIM1-202ENST00000369208 GOLGA1Q92805 767 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 STMN4Q9H169 189 aaPredicted RBP11.54□□□□□ -0.56
SIM1-202ENST00000369208 HLA-DOAP06340 250 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 EPB41L2O43491 1005 aaKnown RBP11.54□□□□□ -0.56
SIM1-202ENST00000369208 ANAPC15P60006 121 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 CCDC12Q8WUD4 166 aaPredicted RBP11.54□□□□□ -0.56
SIM1-202ENST00000369208 UIMC1Q96RL1 719 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 NCAPGQ9BPX3 1015 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 CFTRP13569 1480 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 ZSCAN31Q96LW9 406 aaPredicted RBP11.54□□□□□ -0.56
SIM1-202ENST00000369208 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
SIM1-202ENST00000369208 FGFR1OPO95684 399 aaKnown RBP11.54□□□□□ -0.56
SIM1-202ENST00000369208 CABP5Q9NP86 173 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 RAPGEF3O95398 923 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 SSBP05455 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
SIM1-202ENST00000369208 ZC3H6P61129 1189 aaKnown RBP11.54□□□□□ -0.56
SIM1-202ENST00000369208 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
SIM1-202ENST00000369208 TTC21AQ8NDW8 1320 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 DNAJC8O75937 253 aaPredicted RBP11.53□□□□□ -0.56
SIM1-202ENST00000369208 IFIT5Q13325 482 aaKnown RBP11.53□□□□□ -0.56
SIM1-202ENST00000369208 TMEM266Q2M3C6 531 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 CACNA2D3Q8IZS8 1091 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 SIL1Q9H173 461 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 ABCF2Q9UG63 623 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 LAMC3Q9Y6N6 1575 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 BAG3O95817 575 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 PPP1R42Q7Z4L9 355 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 CCDC174Q6PII3 467 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 URI1O94763 535 aaPredicted RBP11.53□□□□□ -0.56
SIM1-202ENST00000369208 PPFIBP2Q8ND30 876 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 NUDT16Q96DE0 195 aaKnown RBP11.53□□□□□ -0.56
SIM1-202ENST00000369208 ZNF444Q8N0Y2 327 aaPredicted RBP11.53□□□□□ -0.56
SIM1-202ENST00000369208 IDH1O75874 414 aaKnown RBP11.53□□□□□ -0.56
SIM1-202ENST00000369208 STAMBPO95630 424 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 GSTO1P78417 241 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 USP25Q9UHP3 1055 aa11.53□□□□□ -0.56
SIM1-202ENST00000369208 RAB11FIP3O75154 756 aa11.52□□□□□ -0.56
SIM1-202ENST00000369208 RFC4P35249 363 aa11.52□□□□□ -0.56
SIM1-202ENST00000369208 IQCA1Q86XH1 822 aa11.52□□□□□ -0.56
SIM1-202ENST00000369208 DDX12PQ92771 950 aa11.52□□□□□ -0.56
SIM1-202ENST00000369208 SECISBP2LQ93073 1101 aaKnown RBP11.52□□□□□ -0.56
SIM1-202ENST00000369208 TOPBP1Q92547 1522 aa11.52□□□□□ -0.56
SIM1-202ENST00000369208 FAM135AQ9P2D6 1515 aa11.52□□□□□ -0.56
SIM1-202ENST00000369208 BLOC1S2Q6QNY1 142 aa11.52□□□□□ -0.56
SIM1-202ENST00000369208 VPS36Q86VN1 386 aa11.52□□□□□ -0.56
SIM1-202ENST00000369208 VCX3BQ9H321 246 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 VCX3AQ9NNX9 186 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 SRGAP3O43295 1099 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 ANO10Q9NW15 660 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 RABGAP1Q9Y3P9 1069 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 STXBP4Q6ZWJ1 553 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 TSG101Q99816 390 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 CCDC6Q16204 474 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 ZSCAN23Q3MJ62 389 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 FAM76AQ8TAV0 307 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 PIBF1Q8WXW3 757 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 UPF3BQ9BZI7 483 aaKnown RBP11.52□□□□□ -0.57
SIM1-202ENST00000369208 ELP1O95163 1332 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 TRIM4Q9C037 500 aa11.52□□□□□ -0.57
SIM1-202ENST00000369208 CUL7Q14999 1698 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 NOL3O60936 208 aaKnown RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 NEK4P51957 841 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 NAP1L3Q99457 506 aaPredicted RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 FERMT1Q9BQL6 677 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 RAD50Q92878 1312 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 BAG4O95429 457 aaKnown RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 CETN1Q12798 172 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 WHAMMQ8TF30 809 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 TTC14Q96N46 770 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 PPP2R1AP30153 589 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 PPP2R5AQ15172 486 aa11.51□□□□□ -0.57
SIM1-202ENST00000369208 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
SIM1-202ENST00000369208 RABEP2Q9H5N1 569 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms