RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 SUCLG2Q96I99 432 aa15.97■□□□□ 0.15
ECM1-202ENST00000369047 GOLGA6L3A6NEY3 463 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 NEURL1BA8MQ27 555 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 SGSM2O43147 1006 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 CYP2E1P05181 493 aaPredicted RBP15.96■□□□□ 0.15
ECM1-202ENST00000369047 IGKV5-2P06315 115 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 IFIT2P09913 472 aaKnown RBP15.96■□□□□ 0.15
ECM1-202ENST00000369047 HSPA4P34932 840 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 COPS6Q7L5N1 327 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 XAGE3Q8WTP9 111 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 RUFY2Q8WXA3 655 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 SBF2Q86WG5 1849 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 ERBB4Q15303 1308 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 FSD2A1L4K1 749 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 SSFA2P28290 1259 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 GCKRQ14397 625 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 KAZALD1Q96I82 304 aa15.96■□□□□ 0.15
ECM1-202ENST00000369047 DOT1LQ8TEK3 1739 aa15.95■□□□□ 0.14
ECM1-202ENST00000369047 MYL6BP14649 208 aa15.95■□□□□ 0.14
ECM1-202ENST00000369047 INTS4Q96HW7 963 aaKnown RBP15.95■□□□□ 0.14
ECM1-202ENST00000369047 BICC1Q9H694 974 aaKnown RBP15.95■□□□□ 0.14
ECM1-202ENST00000369047 COL15A1P39059 1388 aa15.95■□□□□ 0.14
ECM1-202ENST00000369047 SOCS7O14512 581 aa15.95■□□□□ 0.14
ECM1-202ENST00000369047 KIAA1211Q6ZU35 1233 aa15.95■□□□□ 0.14
ECM1-202ENST00000369047 LRP10Q7Z4F1 713 aa15.95■□□□□ 0.14
ECM1-202ENST00000369047 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
ECM1-202ENST00000369047 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
ECM1-202ENST00000369047 ERVV-2B6SEH9 535 aa15.94■□□□□ 0.14
ECM1-202ENST00000369047 BAG4O95429 457 aaKnown RBP15.94■□□□□ 0.14
ECM1-202ENST00000369047 CUL4AQ13619 759 aa15.94■□□□□ 0.14
ECM1-202ENST00000369047 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
ECM1-202ENST00000369047 TMX3Q96JJ7 454 aa15.94■□□□□ 0.14
ECM1-202ENST00000369047 RAD50Q92878 1312 aa15.93■□□□□ 0.14
ECM1-202ENST00000369047 UPF1Q92900 1129 aaKnown RBP eCLIP15.93■□□□□ 0.14
ECM1-202ENST00000369047 EVI5LQ96CN4 794 aa15.93■□□□□ 0.14
ECM1-202ENST00000369047 PALD1Q9ULE6 856 aa15.93■□□□□ 0.14
ECM1-202ENST00000369047 TNS1Q9HBL0 1735 aaKnown RBP15.93■□□□□ 0.14
ECM1-202ENST00000369047 HIP1O00291 1037 aa15.93■□□□□ 0.14
ECM1-202ENST00000369047 BAG6P46379 1132 aa15.93■□□□□ 0.14
ECM1-202ENST00000369047 MYD88Q99836 296 aa15.93■□□□□ 0.14
ECM1-202ENST00000369047 GZF1Q9H116 711 aaPredicted RBP15.92■□□□□ 0.14
ECM1-202ENST00000369047 DIAPH3Q9NSV4 1193 aa15.92■□□□□ 0.14
ECM1-202ENST00000369047 PA2G4Q9UQ80 394 aaKnown RBP15.92■□□□□ 0.14
ECM1-202ENST00000369047 LAMB4A4D0S4 1761 aa15.92■□□□□ 0.14
ECM1-202ENST00000369047 SASH1O94885 1247 aa15.91■□□□□ 0.14
ECM1-202ENST00000369047 TRIM37O94972 964 aa15.91■□□□□ 0.14
ECM1-202ENST00000369047 MAP4K4O95819 1239 aaPredicted RBP15.91■□□□□ 0.14
ECM1-202ENST00000369047 AACSQ86V21 672 aa15.91■□□□□ 0.14
ECM1-202ENST00000369047 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
ECM1-202ENST00000369047 LSG1Q9H089 658 aaKnown RBP15.91■□□□□ 0.14
ECM1-202ENST00000369047 HMGB2P26583 209 aaKnown RBP15.91■□□□□ 0.14
ECM1-202ENST00000369047 MRE11P49959 708 aa15.91■□□□□ 0.14
ECM1-202ENST00000369047 BRPF3Q9ULD4 1205 aa15.91■□□□□ 0.14
ECM1-202ENST00000369047 RGPD3A6NKT7 1758 aaPredicted RBP15.91■□□□□ 0.14
ECM1-202ENST00000369047 RGPD4Q7Z3J3 1758 aa15.91■□□□□ 0.14
ECM1-202ENST00000369047 ZGPATQ8N5A5 531 aaKnown RBP15.9■□□□□ 0.14
ECM1-202ENST00000369047 ACSBG1Q96GR2 724 aa15.9■□□□□ 0.14
ECM1-202ENST00000369047 COPRSQ9NQ92 184 aa15.9■□□□□ 0.14
ECM1-202ENST00000369047 KLHL40Q2TBA0 621 aa15.9■□□□□ 0.14
ECM1-202ENST00000369047 CWC27Q6UX04 472 aaKnown RBP15.9■□□□□ 0.14
ECM1-202ENST00000369047 IL25Q9H293 177 aa15.9■□□□□ 0.14
ECM1-202ENST00000369047 TMOD3Q9NYL9 352 aa15.9■□□□□ 0.14
ECM1-202ENST00000369047 TOGARAM1Q9Y4F4 1720 aa15.9■□□□□ 0.14
ECM1-202ENST00000369047 SYTL4Q96C24 671 aaPredicted RBP15.89■□□□□ 0.13
ECM1-202ENST00000369047 EAF2Q96CJ1 260 aaPredicted RBP15.89■□□□□ 0.13
ECM1-202ENST00000369047 APBA3O96018 575 aa15.88■□□□□ 0.13
ECM1-202ENST00000369047 PRIM1P49642 420 aaKnown RBP15.88■□□□□ 0.13
ECM1-202ENST00000369047 RABL6Q3YEC7 729 aaPredicted RBP15.88■□□□□ 0.13
ECM1-202ENST00000369047 ITGB4P16144 1822 aa15.88■□□□□ 0.13
ECM1-202ENST00000369047 BTAF1O14981 1849 aa15.88■□□□□ 0.13
ECM1-202ENST00000369047 SMARCC1Q92922 1105 aaPredicted RBP15.88■□□□□ 0.13
ECM1-202ENST00000369047 SNX14Q9Y5W7 946 aa15.88■□□□□ 0.13
ECM1-202ENST00000369047 ARFGEF2Q9Y6D5 1785 aa15.88■□□□□ 0.13
ECM1-202ENST00000369047 XRCC6P12956 609 aaKnown RBP eCLIP15.87■□□□□ 0.13
ECM1-202ENST00000369047 AFDNP55196 1824 aaKnown RBP15.87■□□□□ 0.13
ECM1-202ENST00000369047 UBR2Q8IWV8 1755 aa15.87■□□□□ 0.13
ECM1-202ENST00000369047 PLSCR1O15162 318 aa15.87■□□□□ 0.13
ECM1-202ENST00000369047 KCNB2Q92953 911 aa15.87■□□□□ 0.13
ECM1-202ENST00000369047 SNRKQ9NRH2 765 aa15.87■□□□□ 0.13
ECM1-202ENST00000369047 DDX49Q9Y6V7 483 aaKnown RBP15.87■□□□□ 0.13
ECM1-202ENST00000369047 MCTP1Q6DN14 999 aa15.86■□□□□ 0.13
ECM1-202ENST00000369047 ZDHHC9Q9Y397 364 aa15.86■□□□□ 0.13
ECM1-202ENST00000369047 KAT6BQ8WYB5 2073 aa15.85■□□□□ 0.13
ECM1-202ENST00000369047 A0A087WZG4 1122 aa15.85■□□□□ 0.13
ECM1-202ENST00000369047 RFX5P48382 616 aaPredicted RBP15.85■□□□□ 0.13
ECM1-202ENST00000369047 EPHA10Q5JZY3 1008 aa15.85■□□□□ 0.13
ECM1-202ENST00000369047 UPF3BQ9BZI7 483 aaKnown RBP15.85■□□□□ 0.13
ECM1-202ENST00000369047 TM6SF1Q9BZW5 370 aa15.85■□□□□ 0.13
ECM1-202ENST00000369047 KCNQ2O43526 872 aa15.85■□□□□ 0.13
ECM1-202ENST00000369047 BRD1O95696 1058 aa15.85■□□□□ 0.13
ECM1-202ENST00000369047 CCDC8Q9H0W5 538 aaPredicted RBP15.85■□□□□ 0.13
ECM1-202ENST00000369047 LMBRD1Q9NUN5 540 aa15.85■□□□□ 0.13
ECM1-202ENST00000369047 H7C1W4 665 aa15.84■□□□□ 0.13
ECM1-202ENST00000369047 CASP7P55210 303 aa15.84■□□□□ 0.13
ECM1-202ENST00000369047 PTPN12Q05209 780 aaKnown RBP15.84■□□□□ 0.13
ECM1-202ENST00000369047 PKP1Q13835 747 aa15.84■□□□□ 0.13
ECM1-202ENST00000369047 UBE3BQ7Z3V4 1068 aa15.84■□□□□ 0.13
ECM1-202ENST00000369047 TTC14Q96N46 770 aa15.84■□□□□ 0.13
ECM1-202ENST00000369047 SIL1Q9H173 461 aa15.84■□□□□ 0.13
ECM1-202ENST00000369047 GRPEL1Q9HAV7 217 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms