RNA–Protein interactions for RNA: ENST00000366888.6

PACRG-202, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-202ENST00000366888 CTCFP49711 727 aaPredicted RBP10.65□□□□□ -0.7
PACRG-202ENST00000366888 TTLL7Q6ZT98 887 aa10.65□□□□□ -0.7
PACRG-202ENST00000366888 PRDM10Q9NQV6 1147 aa10.65□□□□□ -0.7
PACRG-202ENST00000366888 MYL6BP14649 208 aa10.65□□□□□ -0.71
PACRG-202ENST00000366888 TAF7Q15545 349 aaPredicted RBP10.65□□□□□ -0.71
PACRG-202ENST00000366888 CRY2Q49AN0 593 aa10.65□□□□□ -0.71
PACRG-202ENST00000366888 JDP2Q8WYK2 163 aa10.65□□□□□ -0.71
PACRG-202ENST00000366888 WBP1LQ9NX94 342 aa10.65□□□□□ -0.71
PACRG-202ENST00000366888 ABT1Q9ULW3 272 aaKnown RBP10.65□□□□□ -0.71
PACRG-202ENST00000366888 RRP7AQ9Y3A4 280 aaKnown RBP10.65□□□□□ -0.71
PACRG-202ENST00000366888 UBN2Q6ZU65 1347 aa10.64□□□□□ -0.71
PACRG-202ENST00000366888 WDR33Q9C0J8 1336 aaKnown RBP10.64□□□□□ -0.71
PACRG-202ENST00000366888 RASSF10A6NK89 507 aa10.64□□□□□ -0.71
PACRG-202ENST00000366888 GRM1Q13255 1194 aa10.64□□□□□ -0.71
PACRG-202ENST00000366888 DEFB115Q30KQ5 88 aa10.64□□□□□ -0.71
PACRG-202ENST00000366888 PNMA8AQ86V59 439 aaPredicted RBP10.64□□□□□ -0.71
PACRG-202ENST00000366888 GPC2Q8N158 579 aa10.64□□□□□ -0.71
PACRG-202ENST00000366888 RPGRQ92834 1020 aaKnown RBP10.64□□□□□ -0.71
PACRG-202ENST00000366888 THUMPD2Q9BTF0 503 aaKnown RBP10.64□□□□□ -0.71
PACRG-202ENST00000366888 ZBTB3Q9H5J0 574 aa10.64□□□□□ -0.71
PACRG-202ENST00000366888 MAP3K15Q6ZN16 1313 aa10.63□□□□□ -0.71
PACRG-202ENST00000366888 HSPA8P11142 646 aaKnown RBP10.63□□□□□ -0.71
PACRG-202ENST00000366888 EPS15P42566 896 aa10.63□□□□□ -0.71
PACRG-202ENST00000366888 EIF6P56537 245 aaKnown RBP10.63□□□□□ -0.71
PACRG-202ENST00000366888 SUSD4Q5VX71 490 aa10.63□□□□□ -0.71
PACRG-202ENST00000366888 C3orf67Q6ZVT6 689 aa10.63□□□□□ -0.71
PACRG-202ENST00000366888 PAXIP1Q6ZW49 1069 aaPredicted RBP10.63□□□□□ -0.71
PACRG-202ENST00000366888 PSMD1Q99460 953 aa10.63□□□□□ -0.71
PACRG-202ENST00000366888 NYXQ9GZU5 481 aa10.63□□□□□ -0.71
PACRG-202ENST00000366888 RIC1Q4ADV7 1423 aa10.62□□□□□ -0.71
PACRG-202ENST00000366888 CASP8AP2Q9UKL3 1982 aa10.62□□□□□ -0.71
PACRG-202ENST00000366888 TRAF5O00463 557 aa10.62□□□□□ -0.71
PACRG-202ENST00000366888 RGL2O15211 777 aa10.62□□□□□ -0.71
PACRG-202ENST00000366888 HTATSF1O43719 755 aaKnown RBP10.62□□□□□ -0.71
PACRG-202ENST00000366888 LMOD1P29536 600 aaPredicted RBP10.62□□□□□ -0.71
PACRG-202ENST00000366888 SCNN1DP51172 638 aa10.62□□□□□ -0.71
PACRG-202ENST00000366888 KIF6Q6ZMV9 814 aa10.62□□□□□ -0.71
PACRG-202ENST00000366888 LARGE2Q8N3Y3 721 aa10.62□□□□□ -0.71
PACRG-202ENST00000366888 DDX21Q9NR30 783 aaKnown RBP eCLIP10.62□□□□□ -0.71
PACRG-202ENST00000366888 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
PACRG-202ENST00000366888 PPEF1O14829 653 aaPredicted RBP10.61□□□□□ -0.71
PACRG-202ENST00000366888 CYP4F22Q6NT55 531 aa10.61□□□□□ -0.71
PACRG-202ENST00000366888 POLR2AP24928 1970 aaKnown RBP10.6□□□□□ -0.71
PACRG-202ENST00000366888 NTSR2O95665 410 aa10.6□□□□□ -0.71
PACRG-202ENST00000366888 HOXA10P31260 410 aaPredicted RBP10.6□□□□□ -0.71
PACRG-202ENST00000366888 EIF4A1P60842 406 aaKnown RBP10.6□□□□□ -0.71
PACRG-202ENST00000366888 AOC3Q16853 763 aa10.6□□□□□ -0.71
PACRG-202ENST00000366888 ABHD8Q96I13 439 aa10.6□□□□□ -0.71
PACRG-202ENST00000366888 CAPNS2Q96L46 248 aa10.6□□□□□ -0.71
PACRG-202ENST00000366888 TSKSQ9UJT2 592 aa10.6□□□□□ -0.71
PACRG-202ENST00000366888 IBTKQ9P2D0 1353 aaPredicted RBP10.59□□□□□ -0.71
PACRG-202ENST00000366888 PPIP5K2O43314 1243 aa10.59□□□□□ -0.71
PACRG-202ENST00000366888 ANXA1P04083 346 aa10.59□□□□□ -0.71
PACRG-202ENST00000366888 MAP2K1Q02750 393 aaPredicted RBP10.59□□□□□ -0.71
PACRG-202ENST00000366888 CST9Q5W186 159 aa10.59□□□□□ -0.71
PACRG-202ENST00000366888 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
PACRG-202ENST00000366888 NIM1KQ8IY84 436 aa10.59□□□□□ -0.71
PACRG-202ENST00000366888 ZNF34Q8IZ26 560 aa10.59□□□□□ -0.71
PACRG-202ENST00000366888 RBM17Q96I25 401 aaKnown RBP10.59□□□□□ -0.71
PACRG-202ENST00000366888 CRAMP1Q96RY5 1269 aa10.59□□□□□ -0.71
PACRG-202ENST00000366888 DDX60Q8IY21 1712 aaKnown RBP10.59□□□□□ -0.71
PACRG-202ENST00000366888 AOC2O75106 756 aa10.58□□□□□ -0.72
PACRG-202ENST00000366888 NEFMP07197 916 aa10.58□□□□□ -0.72
PACRG-202ENST00000366888 FAM161AQ3B820 660 aa10.58□□□□□ -0.72
PACRG-202ENST00000366888 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
PACRG-202ENST00000366888 PNISRQ8TF01 805 aaKnown RBP10.58□□□□□ -0.72
PACRG-202ENST00000366888 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
PACRG-202ENST00000366888 NFE2L2Q16236 605 aa10.57□□□□□ -0.72
PACRG-202ENST00000366888 PROSER3Q2NL68 480 aa10.57□□□□□ -0.72
PACRG-202ENST00000366888 USP50Q70EL3 339 aaPredicted RBP10.57□□□□□ -0.72
PACRG-202ENST00000366888 GPR101Q96P66 508 aaPredicted RBP10.57□□□□□ -0.72
PACRG-202ENST00000366888 PLEKHF1Q96S99 279 aa10.57□□□□□ -0.72
PACRG-202ENST00000366888 GPRC5DQ9NZD1 345 aa10.57□□□□□ -0.72
PACRG-202ENST00000366888 LRRC37AA6NMS7 1700 aa10.57□□□□□ -0.72
PACRG-202ENST00000366888 ABCC4O15439 1325 aa10.56□□□□□ -0.72
PACRG-202ENST00000366888 EIF2S2P20042 333 aaKnown RBP10.56□□□□□ -0.72
PACRG-202ENST00000366888 ECE1P42892 770 aa10.56□□□□□ -0.72
PACRG-202ENST00000366888 CXCL9Q07325 125 aa10.56□□□□□ -0.72
PACRG-202ENST00000366888 MAPK8IP2Q13387 824 aaPredicted RBP10.56□□□□□ -0.72
PACRG-202ENST00000366888 PPP1R42Q7Z4L9 355 aa10.56□□□□□ -0.72
PACRG-202ENST00000366888 NECTIN2Q92692 538 aa10.56□□□□□ -0.72
PACRG-202ENST00000366888 NLRP3Q96P20 1036 aa10.56□□□□□ -0.72
PACRG-202ENST00000366888 GLIS2Q9BZE0 524 aaPredicted RBP10.56□□□□□ -0.72
PACRG-202ENST00000366888 DUOX1Q9NRD9 1551 aa10.56□□□□□ -0.72
PACRG-202ENST00000366888 ATP6V0A2Q9Y487 856 aa10.56□□□□□ -0.72
PACRG-202ENST00000366888 COL4A1P02462 1669 aa10.56□□□□□ -0.72
PACRG-202ENST00000366888 SHTN1A0MZ66 631 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 CCDC85CA6NKD9 419 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 RAD17O75943 681 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
PACRG-202ENST00000366888 GMPSP49915 693 aaPredicted RBP10.55□□□□□ -0.72
PACRG-202ENST00000366888 PDIA6Q15084 440 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 PARP10Q53GL7 1025 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 LRP10Q7Z4F1 713 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 BEGAINQ9BUH8 593 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 ZNF408Q9H9D4 720 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 ADARB2Q9NS39 739 aaKnown RBP10.55□□□□□ -0.72
PACRG-202ENST00000366888 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
PACRG-202ENST00000366888 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms