RNA–Protein interactions for RNA: ENST00000366259.2

LINC00449-201, long intergenic non-protein coding RNA 449, humanhuman

TSL 2 BASIC

Gene LINC00449, Length 872 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00449-201ENST00000366259 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
LINC00449-201ENST00000366259 KIF6Q6ZMV9 814 aa16.39■□□□□ 0.21
LINC00449-201ENST00000366259 TMEM88BA6NKF7 163 aa16.38■□□□□ 0.21
LINC00449-201ENST00000366259 FOXN1O15353 648 aa16.38■□□□□ 0.21
LINC00449-201ENST00000366259 VEGFBP49765 207 aa16.38■□□□□ 0.21
LINC00449-201ENST00000366259 MAP1SQ66K74 1059 aaPredicted RBP16.38■□□□□ 0.21
LINC00449-201ENST00000366259 C3orf67Q6ZVT6 689 aa16.38■□□□□ 0.21
LINC00449-201ENST00000366259 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
LINC00449-201ENST00000366259 PSMD1Q99460 953 aa16.38■□□□□ 0.21
LINC00449-201ENST00000366259 GJA3Q9Y6H8 435 aa16.38■□□□□ 0.21
LINC00449-201ENST00000366259 LTBP1Q14766 1721 aa16.37■□□□□ 0.21
LINC00449-201ENST00000366259 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
LINC00449-201ENST00000366259 CNTROBQ8N137 903 aa16.37■□□□□ 0.21
LINC00449-201ENST00000366259 GPC2Q8N158 579 aa16.37■□□□□ 0.21
LINC00449-201ENST00000366259 NTSR2O95665 410 aa16.36■□□□□ 0.21
LINC00449-201ENST00000366259 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
LINC00449-201ENST00000366259 GIGYF2Q6Y7W6 1299 aaKnown RBP16.36■□□□□ 0.21
LINC00449-201ENST00000366259 JDP2Q8WYK2 163 aa16.36■□□□□ 0.21
LINC00449-201ENST00000366259 ANXA1P04083 346 aa16.35■□□□□ 0.21
LINC00449-201ENST00000366259 PNMA8AQ86V59 439 aaPredicted RBP16.35■□□□□ 0.21
LINC00449-201ENST00000366259 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
LINC00449-201ENST00000366259 MAPK8IP3Q9UPT6 1336 aa16.35■□□□□ 0.21
LINC00449-201ENST00000366259 TAF1P21675 1872 aa16.35■□□□□ 0.21
LINC00449-201ENST00000366259 RIC1Q4ADV7 1423 aa16.35■□□□□ 0.21
LINC00449-201ENST00000366259 LAMB2P55268 1798 aa16.34■□□□□ 0.21
LINC00449-201ENST00000366259 PPEF1O14829 653 aaPredicted RBP16.34■□□□□ 0.21
LINC00449-201ENST00000366259 EIF2S2P20042 333 aaKnown RBP16.34■□□□□ 0.21
LINC00449-201ENST00000366259 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
LINC00449-201ENST00000366259 FMR1Q06787 632 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC00449-201ENST00000366259 PDIA6Q15084 440 aa16.34■□□□□ 0.21
LINC00449-201ENST00000366259 PROSER3Q2NL68 480 aa16.34■□□□□ 0.21
LINC00449-201ENST00000366259 CC2D2BQ6DHV5 1058 aa16.34■□□□□ 0.21
LINC00449-201ENST00000366259 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
LINC00449-201ENST00000366259 LARGE2Q8N3Y3 721 aa16.34■□□□□ 0.21
LINC00449-201ENST00000366259 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
LINC00449-201ENST00000366259 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
LINC00449-201ENST00000366259 EPS15P42566 896 aa16.33■□□□□ 0.2
LINC00449-201ENST00000366259 CRAMP1Q96RY5 1269 aa16.33■□□□□ 0.2
LINC00449-201ENST00000366259 TRPM7Q96QT4 1865 aa16.33■□□□□ 0.2
LINC00449-201ENST00000366259 SCNN1DP51172 638 aa16.32■□□□□ 0.2
LINC00449-201ENST00000366259 PPP1R42Q7Z4L9 355 aa16.32■□□□□ 0.2
LINC00449-201ENST00000366259 NECTIN2Q92692 538 aa16.32■□□□□ 0.2
LINC00449-201ENST00000366259 ANKRD36CQ5JPF3 1778 aa16.31■□□□□ 0.2
LINC00449-201ENST00000366259 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
LINC00449-201ENST00000366259 RIPK4P57078 832 aa16.31■□□□□ 0.2
LINC00449-201ENST00000366259 DEFB115Q30KQ5 88 aa16.31■□□□□ 0.2
LINC00449-201ENST00000366259 PNNQ9H307 717 aaKnown RBP16.31■□□□□ 0.2
LINC00449-201ENST00000366259 RASSF10A6NK89 507 aa16.3■□□□□ 0.2
LINC00449-201ENST00000366259 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
LINC00449-201ENST00000366259 AOC3Q16853 763 aa16.3■□□□□ 0.2
LINC00449-201ENST00000366259 PARP10Q53GL7 1025 aa16.3■□□□□ 0.2
LINC00449-201ENST00000366259 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
LINC00449-201ENST00000366259 AIDAQ96BJ3 306 aa16.3■□□□□ 0.2
LINC00449-201ENST00000366259 NLRP3Q96P20 1036 aa16.3■□□□□ 0.2
LINC00449-201ENST00000366259 UTP14AQ9BVJ6 771 aaKnown RBP16.3■□□□□ 0.2
LINC00449-201ENST00000366259 WBP1LQ9NX94 342 aa16.3■□□□□ 0.2
LINC00449-201ENST00000366259 ABCC4O15439 1325 aa16.29■□□□□ 0.2
LINC00449-201ENST00000366259 PPIP5K2O43314 1243 aa16.29■□□□□ 0.2
LINC00449-201ENST00000366259 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
LINC00449-201ENST00000366259 LBX1P52954 281 aa16.29■□□□□ 0.2
LINC00449-201ENST00000366259 AIMP1Q12904 312 aaKnown RBP16.29■□□□□ 0.2
LINC00449-201ENST00000366259 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
LINC00449-201ENST00000366259 DDX21Q9NR30 783 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC00449-201ENST00000366259 ABT1Q9ULW3 272 aaKnown RBP16.29■□□□□ 0.2
LINC00449-201ENST00000366259 WDR33Q9C0J8 1336 aaKnown RBP16.28■□□□□ 0.2
LINC00449-201ENST00000366259 TRAF5O00463 557 aa16.28■□□□□ 0.2
LINC00449-201ENST00000366259 HCLS1P14317 486 aaPredicted RBP16.28■□□□□ 0.2
LINC00449-201ENST00000366259 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
LINC00449-201ENST00000366259 KRT24Q2M2I5 525 aa16.28■□□□□ 0.2
LINC00449-201ENST00000366259 GRIPAP1Q4V328 841 aa16.28■□□□□ 0.2
LINC00449-201ENST00000366259 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
LINC00449-201ENST00000366259 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
LINC00449-201ENST00000366259 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
LINC00449-201ENST00000366259 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
LINC00449-201ENST00000366259 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.2
LINC00449-201ENST00000366259 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
LINC00449-201ENST00000366259 CST9Q5W186 159 aa16.26■□□□□ 0.19
LINC00449-201ENST00000366259 USP50Q70EL3 339 aaPredicted RBP16.26■□□□□ 0.19
LINC00449-201ENST00000366259 NLRP10Q86W26 655 aa16.26■□□□□ 0.19
LINC00449-201ENST00000366259 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
LINC00449-201ENST00000366259 HSPA8P11142 646 aaKnown RBP16.25■□□□□ 0.19
LINC00449-201ENST00000366259 CXCL9Q07325 125 aa16.25■□□□□ 0.19
LINC00449-201ENST00000366259 GRM1Q13255 1194 aa16.25■□□□□ 0.19
LINC00449-201ENST00000366259 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
LINC00449-201ENST00000366259 GPRC5DQ9NZD1 345 aa16.25■□□□□ 0.19
LINC00449-201ENST00000366259 POLR2AP24928 1970 aaKnown RBP16.24■□□□□ 0.19
LINC00449-201ENST00000366259 GMPSP49915 693 aaPredicted RBP16.24■□□□□ 0.19
LINC00449-201ENST00000366259 TCIRG1Q13488 830 aa16.24■□□□□ 0.19
LINC00449-201ENST00000366259 CYP4F22Q6NT55 531 aa16.24■□□□□ 0.19
LINC00449-201ENST00000366259 DPP8Q6V1X1 898 aaPredicted RBP16.24■□□□□ 0.19
LINC00449-201ENST00000366259 PAXIP1Q6ZW49 1069 aaPredicted RBP16.24■□□□□ 0.19
LINC00449-201ENST00000366259 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
LINC00449-201ENST00000366259 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
LINC00449-201ENST00000366259 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
LINC00449-201ENST00000366259 ZNRF3Q9ULT6 936 aa16.24■□□□□ 0.19
LINC00449-201ENST00000366259 LAS1LQ9Y4W2 734 aaKnown RBP16.24■□□□□ 0.19
LINC00449-201ENST00000366259 DDX60Q8IY21 1712 aaKnown RBP16.23■□□□□ 0.19
LINC00449-201ENST00000366259 BBOX1O75936 387 aa16.23■□□□□ 0.19
LINC00449-201ENST00000366259 RAD17O75943 681 aa16.23■□□□□ 0.19
LINC00449-201ENST00000366259 SP8Q8IXZ3 490 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms