RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 METP08581 1390 aa16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 RNMTO43148 476 aaKnown RBP16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 UBE2HP62256 183 aa16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 LRSAM1Q6UWE0 723 aa16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 TBX22Q9Y458 520 aa16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 DACT1Q9NYF0 836 aa16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 ARHGEF5Q12774 1597 aa16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 IFIT3O14879 490 aaKnown RBP16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 Q6ZUG5 572 aa16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 ALDH1L1O75891 902 aa16.49■□□□□ 0.23
PCMTD1-201ENST00000360540 ZCRB1Q8TBF4 217 aaKnown RBP16.49■□□□□ 0.23
PCMTD1-201ENST00000360540 ANKRD18BA2A2Z9 1011 aa16.49■□□□□ 0.23
PCMTD1-201ENST00000360540 SYT1P21579 422 aa16.49■□□□□ 0.23
PCMTD1-201ENST00000360540 CADPS2Q86UW7 1296 aa16.49■□□□□ 0.23
PCMTD1-201ENST00000360540 RRAGDQ9NQL2 400 aaPredicted RBP16.49■□□□□ 0.23
PCMTD1-201ENST00000360540 INSRP06213 1382 aa16.49■□□□□ 0.23
PCMTD1-201ENST00000360540 DHX8Q14562 1220 aaKnown RBP16.48■□□□□ 0.23
PCMTD1-201ENST00000360540 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
PCMTD1-201ENST00000360540 CREB3L3Q68CJ9 461 aa16.48■□□□□ 0.23
PCMTD1-201ENST00000360540 PALD1Q9ULE6 856 aa16.48■□□□□ 0.23
PCMTD1-201ENST00000360540 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
PCMTD1-201ENST00000360540 KLF18A0A0U1RQI7 1052 aa16.48■□□□□ 0.23
PCMTD1-201ENST00000360540 EXOC5O00471 708 aa16.48■□□□□ 0.23
PCMTD1-201ENST00000360540 ANAPC15P60006 121 aa16.48■□□□□ 0.23
PCMTD1-201ENST00000360540 F13A1P00488 732 aa16.47■□□□□ 0.23
PCMTD1-201ENST00000360540 RXRAP19793 462 aa16.47■□□□□ 0.23
PCMTD1-201ENST00000360540 CDKL5O76039 1030 aa16.47■□□□□ 0.23
PCMTD1-201ENST00000360540 TMX1Q9H3N1 280 aa16.47■□□□□ 0.23
PCMTD1-201ENST00000360540 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
PCMTD1-201ENST00000360540 ZNF594Q96JF6 807 aaPredicted RBP16.47■□□□□ 0.23
PCMTD1-201ENST00000360540 ZHX3Q9H4I2 956 aa16.47■□□□□ 0.23
PCMTD1-201ENST00000360540 DBNDD2Q9BQY9 259 aa16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 SKIDA1Q1XH10 827 aa16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 FAM89AQ96GI7 184 aa16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 SBNO2Q9Y2G9 1366 aa16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 APOBRQ0VD83 1088 aa16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 ZNF790Q6PG37 636 aa16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 DDX21Q9NR30 783 aaKnown RBP eCLIP16.46■□□□□ 0.23
PCMTD1-201ENST00000360540 ABCC4O15439 1325 aa16.46■□□□□ 0.22
PCMTD1-201ENST00000360540 A1BGP04217 495 aa16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 SLC3A2P08195 630 aaKnown RBP16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 PRDM10Q9NQV6 1147 aa16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 GOLGA8AA7E2F4 631 aa16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 SSBP05455 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 SLC12A7Q9Y666 1083 aa16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 MCMDC2Q4G0Z9 681 aa16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
PCMTD1-201ENST00000360540 HMGB1P09429 215 aaKnown RBP16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 MARCKSP29966 332 aaPredicted RBP16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 TXLNAP40222 546 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 ATP2B3Q16720 1220 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 FILIP1LQ4L180 1135 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 TMEM67Q5HYA8 995 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 SLC9C2Q5TAH2 1124 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 UNC5CLQ8IV45 518 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 DNAJC25Q9H1X3 360 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 SBNO1A3KN83 1393 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 RTL1A6NKG5 1358 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 CPLX3Q8WVH0 158 aa16.44■□□□□ 0.22
PCMTD1-201ENST00000360540 PRR36Q9H6K5 1346 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 USP5P45974 858 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 ANO6Q4KMQ2 910 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 ANO10Q9NW15 660 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 PLEKHG3A1L390 1219 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 OFD1O75665 1012 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 SLC26A6Q9BXS9 759 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 C19orf44Q9H6X5 657 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 PAG1Q9NWQ8 432 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 SNX14Q9Y5W7 946 aa16.43■□□□□ 0.22
PCMTD1-201ENST00000360540 SFPQP23246 707 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 PRDM15P57071 1507 aaPredicted RBP16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 CCDC171Q6TFL3 1326 aa16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 EIF4A1P60842 406 aaKnown RBP16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 PPFIBP1Q86W92 1011 aa16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 CLCN1P35523 988 aa16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 IARSP41252 1262 aaKnown RBP16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 CDK5RAP3Q96JB5 506 aa16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 DDX19AQ9NUU7 478 aaKnown RBP16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 ARGLU1Q9NWB6 273 aaPredicted RBP16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 SGSM2O43147 1006 aa16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 CEP89Q96ST8 783 aa16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
PCMTD1-201ENST00000360540 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 CCDC186Q7Z3E2 898 aa16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 HMG20BQ9P0W2 317 aa16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 TCEAL9Q9UHQ7 104 aa16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 JAG2Q9Y219 1238 aa16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 KDM5AP29375 1690 aaKnown RBP16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 NPHP3Q7Z494 1330 aa16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 SLC5A1P13866 664 aa16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 METAP2P50579 478 aaKnown RBP eCLIP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms