RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 CCDC69A6NI79 296 aa21.37■■□□□ 1.01
PTPA-206ENST00000358994 SURF6O75683 361 aaKnown RBP21.37■■□□□ 1.01
PTPA-206ENST00000358994 GTF3C6Q969F1 213 aa21.37■■□□□ 1.01
PTPA-206ENST00000358994 STK31Q9BXU1 1019 aa21.37■■□□□ 1.01
PTPA-206ENST00000358994 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
PTPA-206ENST00000358994 FHOD1Q9Y613 1164 aa21.37■■□□□ 1.01
PTPA-206ENST00000358994 SLC52A1Q9NWF4 448 aa21.36■■□□□ 1.01
PTPA-206ENST00000358994 RAB11FIP3O75154 756 aa21.35■■□□□ 1.01
PTPA-206ENST00000358994 COL9A3Q14050 684 aaPredicted RBP21.35■■□□□ 1.01
PTPA-206ENST00000358994 ERCC6LQ2NKX8 1250 aa21.35■■□□□ 1.01
PTPA-206ENST00000358994 KCNB2Q92953 911 aa21.35■■□□□ 1.01
PTPA-206ENST00000358994 NRKQ7Z2Y5 1582 aa21.35■■□□□ 1.01
PTPA-206ENST00000358994 FOXO3O43524 673 aa21.35■■□□□ 1.01
PTPA-206ENST00000358994 C11orf57Q6ZUT1 292 aaPredicted RBP21.35■■□□□ 1.01
PTPA-206ENST00000358994 GOLGA6L19H0YKK7 550 aa21.34■■□□□ 1.01
PTPA-206ENST00000358994 FILIP1Q7Z7B0 1213 aa21.34■■□□□ 1.01
PTPA-206ENST00000358994 LRRN4CLQ8ND94 238 aa21.34■■□□□ 1.01
PTPA-206ENST00000358994 BICD2Q8TD16 824 aa21.34■■□□□ 1.01
PTPA-206ENST00000358994 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
PTPA-206ENST00000358994 TMEM131LA2VDJ0 1609 aa21.34■■□□□ 1.01
PTPA-206ENST00000358994 RNF20Q5VTR2 975 aa21.34■■□□□ 1.01
PTPA-206ENST00000358994 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.34■■□□□ 1.01
PTPA-206ENST00000358994 SETD1AO15047 1707 aaKnown RBP21.34■■□□□ 1.01
PTPA-206ENST00000358994 MLH3Q9UHC1 1453 aa21.34■■□□□ 1.01
PTPA-206ENST00000358994 CAVIN2O95810 425 aa21.33■■□□□ 1.01
PTPA-206ENST00000358994 UBTFL1P0CB47 393 aaPredicted RBP21.33■■□□□ 1.01
PTPA-206ENST00000358994 PDCP20941 246 aa21.33■■□□□ 1.01
PTPA-206ENST00000358994 PPP1R42Q7Z4L9 355 aa21.33■■□□□ 1.01
PTPA-206ENST00000358994 NECTIN2Q92692 538 aa21.33■■□□□ 1.01
PTPA-206ENST00000358994 PDIA4P13667 645 aaKnown RBP21.33■■□□□ 1.01
PTPA-206ENST00000358994 CLCN6P51797 869 aa21.33■■□□□ 1.01
PTPA-206ENST00000358994 LARP1Q6PKG0 1096 aaKnown RBP21.33■■□□□ 1.01
PTPA-206ENST00000358994 KCND1Q9NSA2 647 aa21.33■■□□□ 1.01
PTPA-206ENST00000358994 CRYBG1Q9Y4K1 1723 aa21.33■■□□□ 1
PTPA-206ENST00000358994 NECTIN1Q15223 517 aa21.32■■□□□ 1
PTPA-206ENST00000358994 TRIM34Q9BYJ4 488 aa21.32■■□□□ 1
PTPA-206ENST00000358994 L2HGDHQ9H9P8 463 aa21.32■■□□□ 1
PTPA-206ENST00000358994 NCKAP5LQ9HCH0 1330 aa21.32■■□□□ 1
PTPA-206ENST00000358994 PLA2G4AP47712 749 aa21.32■■□□□ 1
PTPA-206ENST00000358994 DLC1Q96QB1 1528 aa21.32■■□□□ 1
PTPA-206ENST00000358994 POLA2Q14181 598 aa21.32■■□□□ 1
PTPA-206ENST00000358994 FEZ2Q9UHY8 353 aaPredicted RBP21.32■■□□□ 1
PTPA-206ENST00000358994 CHD2O14647 1828 aaKnown RBP21.31■■□□□ 1
PTPA-206ENST00000358994 PNMA6AP0CW24 399 aaPredicted RBP21.31■■□□□ 1
PTPA-206ENST00000358994 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
PTPA-206ENST00000358994 ADGRL3Q9HAR2 1447 aa21.31■■□□□ 1
PTPA-206ENST00000358994 KIF2AO00139 706 aaPredicted RBP21.3■■□□□ 1
PTPA-206ENST00000358994 RAD51AP2Q09MP3 1159 aa21.3■■□□□ 1
PTPA-206ENST00000358994 RUFY2Q8WXA3 655 aa21.3■■□□□ 1
PTPA-206ENST00000358994 MLECQ14165 292 aa21.29■■□□□ 1
PTPA-206ENST00000358994 CCDC93Q567U6 631 aa21.29■■□□□ 1
PTPA-206ENST00000358994 CCDC30Q5VVM6 783 aa21.29■■□□□ 1
PTPA-206ENST00000358994 SYTL4Q96C24 671 aaPredicted RBP21.29■■□□□ 1
PTPA-206ENST00000358994 TSPYL1Q9H0U9 437 aa21.29■■□□□ 1
PTPA-206ENST00000358994 ADCY9O60503 1353 aa21.29■■□□□ 1
PTPA-206ENST00000358994 FAM208AQ9UK61 1670 aaKnown RBP21.28■■□□□ 1
PTPA-206ENST00000358994 SNW1Q13573 536 aaKnown RBP21.28■■□□□ 1
PTPA-206ENST00000358994 MTHFSDQ2M296 383 aaKnown RBP21.28■■□□□ 1
PTPA-206ENST00000358994 TCEANC2Q96MN5 208 aa21.28■■□□□ 1
PTPA-206ENST00000358994 HTATSF1O43719 755 aaKnown RBP21.28■■□□□ 1
PTPA-206ENST00000358994 ZKSCAN1P17029 563 aaPredicted RBP21.28■■□□□ 1
PTPA-206ENST00000358994 E4F1Q66K89 784 aaPredicted RBP21.28■■□□□ 1
PTPA-206ENST00000358994 CREB3L3Q68CJ9 461 aa21.28■■□□□ 1
PTPA-206ENST00000358994 MAP3K5Q99683 1374 aa21.28■■□□□ 1
PTPA-206ENST00000358994 A0A087WWV3 80 aa21.27■■□□□ 1
PTPA-206ENST00000358994 WASLO00401 505 aaPredicted RBP21.27■■□□□ 1
PTPA-206ENST00000358994 HSP90AB2PQ58FF8 381 aa21.27■■□□□ 1
PTPA-206ENST00000358994 DHX40Q8IX18 779 aaKnown RBP21.27■■□□□ 1
PTPA-206ENST00000358994 STAG3Q9UJ98 1225 aa21.27■■□□□ 1
PTPA-206ENST00000358994 RBM8AQ9Y5S9 174 aaKnown RBP21.27■■□□□ 1
PTPA-206ENST00000358994 MON2Q7Z3U7 1717 aa21.27■■□□□ 1
PTPA-206ENST00000358994 SRGAP3O43295 1099 aa21.27■■□□□ 1
PTPA-206ENST00000358994 N4BP2Q86UW6 1770 aaPredicted RBP21.26■□□□□ 0.99
PTPA-206ENST00000358994 USP42Q9H9J4 1324 aaKnown RBP21.26■□□□□ 0.99
PTPA-206ENST00000358994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.26■□□□□ 0.99
PTPA-206ENST00000358994 GLRX3O76003 335 aaKnown RBP21.26■□□□□ 0.99
PTPA-206ENST00000358994 ZRANB2O95218 330 aaKnown RBP eCLIP21.26■□□□□ 0.99
PTPA-206ENST00000358994 STX1AQ16623 288 aa21.26■□□□□ 0.99
PTPA-206ENST00000358994 ARHGAP29Q52LW3 1261 aa21.26■□□□□ 0.99
PTPA-206ENST00000358994 SYT10Q6XYQ8 523 aa21.26■□□□□ 0.99
PTPA-206ENST00000358994 BECN2A8MW95 431 aa21.26■□□□□ 0.99
PTPA-206ENST00000358994 NEK11Q8NG66 645 aa21.26■□□□□ 0.99
PTPA-206ENST00000358994 C3P01024 1663 aa21.25■□□□□ 0.99
PTPA-206ENST00000358994 PPP1R13BQ96KQ4 1090 aa21.25■□□□□ 0.99
PTPA-206ENST00000358994 NUDT16Q96DE0 195 aaKnown RBP21.25■□□□□ 0.99
PTPA-206ENST00000358994 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.25■□□□□ 0.99
PTPA-206ENST00000358994 GIGYF1O75420 1035 aaPredicted RBP21.24■□□□□ 0.99
PTPA-206ENST00000358994 NBPF11Q86T75 865 aa21.24■□□□□ 0.99
PTPA-206ENST00000358994 RGPD1P0DJD0 1748 aa21.24■□□□□ 0.99
PTPA-206ENST00000358994 CACNA1FO60840 1977 aa21.24■□□□□ 0.99
PTPA-206ENST00000358994 TTC41PQ6P2S7 1318 aa21.24■□□□□ 0.99
PTPA-206ENST00000358994 ITSN1Q15811 1721 aa21.24■□□□□ 0.99
PTPA-206ENST00000358994 RIMS1Q86UR5 1692 aaKnown RBP21.24■□□□□ 0.99
PTPA-206ENST00000358994 POLR3GO15318 223 aaPredicted RBP21.23■□□□□ 0.99
PTPA-206ENST00000358994 RESTQ13127 1097 aa21.23■□□□□ 0.99
PTPA-206ENST00000358994 STK3Q13188 491 aa21.23■□□□□ 0.99
PTPA-206ENST00000358994 NFATC2IPQ8NCF5 419 aa21.23■□□□□ 0.99
PTPA-206ENST00000358994 SLC27A2O14975 620 aa21.23■□□□□ 0.99
PTPA-206ENST00000358994 GSDMDP57764 484 aa21.23■□□□□ 0.99
PTPA-206ENST00000358994 TOB2Q14106 344 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms