RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SSFA2P28290 1259 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 SLC39A6Q13433 755 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 CCDC27Q2M243 656 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 FLAD1Q8NFF5 587 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 TSHZ2Q9NRE2 1034 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 WDR70Q9NW82 654 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 RRP7AQ9Y3A4 280 aaKnown RBP5.19□□□□□ -1.58
CNOT4-202ENST00000356162 PNPLA7Q6ZV29 1317 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 PTCD1O75127 700 aaKnown RBP5.19□□□□□ -1.58
CNOT4-202ENST00000356162 KCNQ4P56696 695 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 THUMPD2Q9BTF0 503 aaKnown RBP5.19□□□□□ -1.58
CNOT4-202ENST00000356162 TEX13AQ9BXU3 409 aaPredicted RBP5.19□□□□□ -1.58
CNOT4-202ENST00000356162 ARIH1Q9Y4X5 557 aaPredicted RBP5.19□□□□□ -1.58
CNOT4-202ENST00000356162 PDIA6Q15084 440 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 TYW1BQ6NUM6 668 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 DNAJC10Q8IXB1 793 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 ZNF496Q96IT1 587 aaPredicted RBP5.18□□□□□ -1.58
CNOT4-202ENST00000356162 SLC4A5Q9BY07 1137 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 TFCP2L1Q9NZI6 479 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 TSPYL4Q9UJ04 414 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 VPS9D1Q9Y2B5 631 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 GNPATO15228 680 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 CRKLP46109 303 aaKnown RBP5.18□□□□□ -1.58
CNOT4-202ENST00000356162 SLC16A10Q8TF71 515 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 FBXW7Q969H0 707 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 CCDC87Q9NVE4 849 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 IFT57Q9NWB7 429 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 SOS1Q07889 1333 aaPredicted RBP5.18□□□□□ -1.58
CNOT4-202ENST00000356162 IL16Q14005 1332 aa5.18□□□□□ -1.58
CNOT4-202ENST00000356162 COL15A1P39059 1388 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 KCNQ3O43525 872 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 RPS6KA4O75676 772 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 SNRPA1P09661 255 aaKnown RBP5.17□□□□□ -1.58
CNOT4-202ENST00000356162 CYP19A1P11511 503 aaPredicted RBP5.17□□□□□ -1.58
CNOT4-202ENST00000356162 EIF4A1P60842 406 aaKnown RBP5.17□□□□□ -1.58
CNOT4-202ENST00000356162 NEUROD2Q15784 382 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 FAM9BQ8IZU0 186 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 MTFR1LQ9H019 292 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 ERBB4Q15303 1308 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 SPDYE16A6NNV3 312 aaPredicted RBP5.17□□□□□ -1.58
CNOT4-202ENST00000356162 CHL1O00533 1208 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 STARD3NLO95772 234 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 ZNF853P0CG23 659 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 GNAI1P63096 354 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 EPAS1Q99814 870 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 ZBED2Q9BTP6 218 aa5.17□□□□□ -1.58
CNOT4-202ENST00000356162 RTCBQ9Y3I0 505 aaKnown RBP5.17□□□□□ -1.58
CNOT4-202ENST00000356162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.16□□□□□ -1.58
CNOT4-202ENST00000356162 HOXB7P09629 217 aa5.16□□□□□ -1.58
CNOT4-202ENST00000356162 INTS5Q6P9B9 1019 aaKnown RBP5.16□□□□□ -1.58
CNOT4-202ENST00000356162 COL23A1Q86Y22 540 aaPredicted RBP5.16□□□□□ -1.58
CNOT4-202ENST00000356162 SPON1Q9HCB6 807 aa5.16□□□□□ -1.58
CNOT4-202ENST00000356162 ZBTB1Q9Y2K1 713 aa5.16□□□□□ -1.58
CNOT4-202ENST00000356162 NRXN2Q9P2S2 1712 aa5.16□□□□□ -1.58
CNOT4-202ENST00000356162 A0A087WZG4 1122 aa5.16□□□□□ -1.58
CNOT4-202ENST00000356162 WDR63Q8IWG1 891 aa5.16□□□□□ -1.58
CNOT4-202ENST00000356162 WWC1Q8IX03 1113 aa5.16□□□□□ -1.58
CNOT4-202ENST00000356162 KIF13BQ9NQT8 1826 aa5.16□□□□□ -1.58
CNOT4-202ENST00000356162 ANKRD36CQ5JPF3 1778 aa5.16□□□□□ -1.58
CNOT4-202ENST00000356162 USP42Q9H9J4 1324 aaKnown RBP5.16□□□□□ -1.58
CNOT4-202ENST00000356162 PPP1R3GB7ZBB8 358 aa5.15□□□□□ -1.58
CNOT4-202ENST00000356162 GIGYF1O75420 1035 aaPredicted RBP5.15□□□□□ -1.58
CNOT4-202ENST00000356162 IL6STP40189 918 aaPredicted RBP5.15□□□□□ -1.58
CNOT4-202ENST00000356162 AMIGO3Q86WK7 504 aa5.15□□□□□ -1.58
CNOT4-202ENST00000356162 DDX12PQ92771 950 aa5.15□□□□□ -1.58
CNOT4-202ENST00000356162 MBIPQ9NS73 344 aa5.15□□□□□ -1.58
CNOT4-202ENST00000356162 MIS18AQ9NYP9 233 aa5.15□□□□□ -1.58
CNOT4-202ENST00000356162 ZNF521Q96K83 1311 aa5.15□□□□□ -1.58
CNOT4-202ENST00000356162 ZBTB7AO95365 584 aa5.15□□□□□ -1.59
CNOT4-202ENST00000356162 TRAPPC3LQ5T215 181 aa5.15□□□□□ -1.59
CNOT4-202ENST00000356162 PDGFDQ9GZP0 370 aaPredicted RBP5.15□□□□□ -1.59
CNOT4-202ENST00000356162 LAS1LQ9Y4W2 734 aaKnown RBP5.15□□□□□ -1.59
CNOT4-202ENST00000356162 CACNA1FO60840 1977 aa5.15□□□□□ -1.59
CNOT4-202ENST00000356162 BHMG1C9JSJ3 638 aaPredicted RBP5.14□□□□□ -1.59
CNOT4-202ENST00000356162 COL9A1P20849 921 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 POLD1P28340 1107 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 EIF5P55010 431 aaKnown RBP5.14□□□□□ -1.59
CNOT4-202ENST00000356162 USP16Q9Y5T5 823 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 KIAA1551Q9HCM1 1747 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 FANCIQ9NVI1 1328 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 AFDNP55196 1824 aaKnown RBP5.14□□□□□ -1.59
CNOT4-202ENST00000356162 PRAMEF22A3QJZ6 481 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 CANXP27824 592 aaKnown RBP5.14□□□□□ -1.59
CNOT4-202ENST00000356162 RFC4P35249 363 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 ARHGEF1Q92888 912 aaKnown RBP5.14□□□□□ -1.59
CNOT4-202ENST00000356162 CHMP4AQ9BY43 222 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 NARFQ9UHQ1 456 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 ARFGEF2Q9Y6D5 1785 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 C10orf71Q711Q0 1435 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 NUP98P52948 1817 aa5.14□□□□□ -1.59
CNOT4-202ENST00000356162 A1BGP04217 495 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 PLCB2Q00722 1185 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 C6orf132Q5T0Z8 1188 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 MYH16Q9H6N6 1097 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 DLEC1Q9Y238 1755 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 ATP10DQ9P241 1426 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 NBPF26B4DH59 902 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 ZPR1O75312 459 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 GYS1P13807 737 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 NBR1Q14596 966 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 315.4 ms