RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 NBPF8Q3BBV2 869 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 NBPF14Q5TI25 921 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 FAM107BQ9H098 131 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 CCT6AP40227 531 aaKnown RBP13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 FAM13AO94988 1023 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 ATP2A2P16615 1042 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 GABPB2Q8TAK5 448 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 WHAMMQ8TF30 809 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 RASAL2Q9UJF2 1139 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 SPDYE16A6NNV3 312 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 GNL1P36915 607 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 PDE4BQ07343 736 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 C1orf115Q9H7X2 142 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 GBP7Q8N8V2 638 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 JAKMIP1Q96N16 626 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 KAT14Q9H8E8 782 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 E7EVH7 732 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 CEP120Q8N960 986 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 JADE2Q9NQC1 790 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 WAPLQ7Z5K2 1190 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 CCDC110Q8TBZ0 833 aa13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-202ENST00000355451 TTF1Q15361 905 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 NSMCE1Q8WV22 266 aa13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 SPC25Q9HBM1 224 aa13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 IFIT5Q13325 482 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 SRGAP3O43295 1099 aa13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 TSPY2A6NKD2 308 aa13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 CDR2Q01850 454 aa13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 TOP1P11387 765 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 THEMISQ8N1K5 641 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 NSRP1Q9H0G5 558 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 CLSTN2Q9H4D0 955 aa13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 CCDC77Q9BR77 488 aa13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 RNF41Q9H4P4 317 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 PPANQ9NQ55 473 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-202ENST00000355451 PPFIBP2Q8ND30 876 aa13.11□□□□□ -0.31
NUDCD3-202ENST00000355451 GPATCH11Q8N954 259 aa13.11□□□□□ -0.31
NUDCD3-202ENST00000355451 NAA25Q14CX7 972 aa13.11□□□□□ -0.31
NUDCD3-202ENST00000355451 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-202ENST00000355451 FBXW4P57775 412 aa13.11□□□□□ -0.31
NUDCD3-202ENST00000355451 PPFIA1Q13136 1202 aa13.11□□□□□ -0.31
NUDCD3-202ENST00000355451 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
NUDCD3-202ENST00000355451 MRE11P49959 708 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 MGEA5O60502 916 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 PDE6AP16499 860 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 SP4Q02446 784 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 TRAF1Q13077 416 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 SELENOOQ9BVL4 669 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 LRRC27Q9C0I9 530 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 EXOC1Q9NV70 894 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 SFPQP23246 707 aaKnown RBP eCLIP13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 RFC1P35251 1148 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 CALM1P0DP23 149 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 CALM2P0DP24 149 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 CALM3P0DP25 149 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 PRR16Q569H4 304 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 NUF2Q9BZD4 464 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 RPGRIP1LQ68CZ1 1315 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 LDHCP07864 332 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 PPP2R5DQ14738 602 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 M0QZ92 97 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 FCHSD2O94868 740 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 C4orf50Q6ZRC1 276 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 CHMP6Q96FZ7 201 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 ZBTB21Q9ULJ3 1066 aa13.1□□□□□ -0.31
NUDCD3-202ENST00000355451 IFIT3O14879 490 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 NUCB1Q02818 461 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 PPP1R21Q6ZMI0 780 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 AFAP1L2Q8N4X5 818 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 CNNM3Q8NE01 707 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 EXOC6Q8TAG9 804 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 AGTPBP1Q9UPW5 1226 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 GJA3Q9Y6H8 435 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 PRKAG2Q9UGJ0 569 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 GINS2Q9Y248 185 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 ZNF213O14771 459 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 HSF2BPO75031 334 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 PSMD6Q15008 389 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 SFMBT1Q9UHJ3 866 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 UBA7P41226 1012 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 CAMK4Q16566 473 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 TMTC4Q5T4D3 741 aa13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 UTP14CQ5TAP6 766 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-202ENST00000355451 HSPA1LP34931 641 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms