RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 SSH3Q8TE77 659 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 LEO1Q8WVC0 666 aaPredicted RBP14.39□□□□□ -0.11
TRERF1-202ENST00000354325 NEXMIFQ5QGS0 1516 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 JAKMIP3Q5VZ66 844 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 RBM43Q6ZSC3 357 aaKnown RBP14.39□□□□□ -0.11
TRERF1-202ENST00000354325 FERMT3Q86UX7 667 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 GOLGA6L9A6NEM1 432 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 LIG1P18858 919 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 NME9Q86XW9 330 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 KCND1Q9NSA2 647 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 ADGRL3Q9HAR2 1447 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 CBFA2T2O43439 604 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 KCNJ6P48051 423 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 BABAM1Q9NWV8 329 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 MAP3K5Q99683 1374 aa14.39□□□□□ -0.11
TRERF1-202ENST00000354325 CD163L1Q9NR16 1453 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
TRERF1-202ENST00000354325 FBXO38Q6PIJ6 1188 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 POGZQ7Z3K3 1410 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 CLTCQ00610 1675 aaKnown RBP14.38□□□□□ -0.11
TRERF1-202ENST00000354325 ZSCAN12O43309 604 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 SLC26A8Q96RN1 970 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 EFCC1Q9HA90 598 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 ECHDC1Q9NTX5 307 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 PTPRMP28827 1452 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 SRGAP3O43295 1099 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 CYP2C19P33261 490 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 LEKR1Q6ZMV7 388 aa14.38□□□□□ -0.11
TRERF1-202ENST00000354325 AP5Z1O43299 807 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
TRERF1-202ENST00000354325 NYAP1Q6ZVC0 841 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 RASSF4Q9H2L5 321 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 TRMT1Q9NXH9 659 aaKnown RBP14.37□□□□□ -0.11
TRERF1-202ENST00000354325 KNDC1Q76NI1 1749 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 SPG7Q9UQ90 795 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 AMPHP49418 695 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 NUTM2GQ5VZR2 741 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 SDF4Q9BRK5 362 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 NRBP1Q9UHY1 535 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 MLH3Q9UHC1 1453 aa14.37□□□□□ -0.11
TRERF1-202ENST00000354325 WASLO00401 505 aaPredicted RBP14.36□□□□□ -0.11
TRERF1-202ENST00000354325 ACBD3Q9H3P7 528 aa14.36□□□□□ -0.11
TRERF1-202ENST00000354325 PNMA6EA0A0J9YXQ4 647 aa14.36□□□□□ -0.11
TRERF1-202ENST00000354325 TUBB4BP68371 445 aa14.36□□□□□ -0.11
TRERF1-202ENST00000354325 ARHGAP29Q52LW3 1261 aa14.36□□□□□ -0.11
TRERF1-202ENST00000354325 SMC2O95347 1197 aa14.36□□□□□ -0.11
TRERF1-202ENST00000354325 MAP4K4O95819 1239 aaPredicted RBP14.36□□□□□ -0.11
TRERF1-202ENST00000354325 IVLP07476 585 aa14.36□□□□□ -0.11
TRERF1-202ENST00000354325 PPP1R42Q7Z4L9 355 aa14.36□□□□□ -0.11
TRERF1-202ENST00000354325 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRERF1-202ENST00000354325 TFIP11Q9UBB9 837 aaKnown RBP14.35□□□□□ -0.11
TRERF1-202ENST00000354325 SF3A1Q15459 793 aaKnown RBP14.35□□□□□ -0.11
TRERF1-202ENST00000354325 EIF3JO75822 258 aaKnown RBP14.35□□□□□ -0.11
TRERF1-202ENST00000354325 EIF4A2Q14240 407 aaKnown RBP14.35□□□□□ -0.11
TRERF1-202ENST00000354325 WAPLQ7Z5K2 1190 aa14.35□□□□□ -0.11
TRERF1-202ENST00000354325 RASEFQ8IZ41 740 aa14.35□□□□□ -0.11
TRERF1-202ENST00000354325 ALDH8A1Q9H2A2 487 aaPredicted RBP14.35□□□□□ -0.11
TRERF1-202ENST00000354325 ME3Q16798 604 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 UNC5CLQ8IV45 518 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 RBM8AQ9Y5S9 174 aaKnown RBP14.34□□□□□ -0.11
TRERF1-202ENST00000354325 NPHP1O15259 732 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
TRERF1-202ENST00000354325 POTEB2H3BUK9 544 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 CREB3L3Q68CJ9 461 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 CDC37L1Q7L3B6 337 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 G2E3Q7L622 706 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRERF1-202ENST00000354325 MUM1L1Q5H9M0 696 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 CCAR1Q8IX12 1150 aaKnown RBP14.34□□□□□ -0.11
TRERF1-202ENST00000354325 NECAB1Q8N987 351 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 LARP6Q9BRS8 491 aaKnown RBP14.34□□□□□ -0.11
TRERF1-202ENST00000354325 TRIM34Q9BYJ4 488 aa14.34□□□□□ -0.11
TRERF1-202ENST00000354325 PXDNLA1KZ92 1463 aa14.33□□□□□ -0.11
TRERF1-202ENST00000354325 GNL2Q13823 731 aaKnown RBP14.33□□□□□ -0.12
TRERF1-202ENST00000354325 TAF7LQ5H9L4 462 aa14.33□□□□□ -0.12
TRERF1-202ENST00000354325 NUDT16Q96DE0 195 aaKnown RBP14.33□□□□□ -0.12
TRERF1-202ENST00000354325 OSBPL5Q9H0X9 879 aaPredicted RBP14.33□□□□□ -0.12
TRERF1-202ENST00000354325 PHLPP2Q6ZVD8 1323 aa14.33□□□□□ -0.12
TRERF1-202ENST00000354325 KCNB2Q92953 911 aa14.33□□□□□ -0.12
TRERF1-202ENST00000354325 ERLIN1O75477 346 aa14.33□□□□□ -0.12
TRERF1-202ENST00000354325 CEBPAP49715 358 aaPredicted RBP14.33□□□□□ -0.12
TRERF1-202ENST00000354325 PI4K2BQ8TCG2 481 aa14.33□□□□□ -0.12
TRERF1-202ENST00000354325 LLPHQ9BRT6 129 aaKnown RBP14.33□□□□□ -0.12
TRERF1-202ENST00000354325 L2HGDHQ9H9P8 463 aa14.33□□□□□ -0.12
TRERF1-202ENST00000354325 ARFGAP3Q9NP61 516 aa14.33□□□□□ -0.12
TRERF1-202ENST00000354325 USP42Q9H9J4 1324 aaKnown RBP14.32□□□□□ -0.12
TRERF1-202ENST00000354325 EFCAB8A8MWE9 144 aa14.32□□□□□ -0.12
TRERF1-202ENST00000354325 HMGB1P09429 215 aaKnown RBP14.32□□□□□ -0.12
TRERF1-202ENST00000354325 FBLN1P23142 703 aa14.32□□□□□ -0.12
TRERF1-202ENST00000354325 CCDC158Q5M9N0 1113 aa14.32□□□□□ -0.12
TRERF1-202ENST00000354325 FAM53CQ9NYF3 392 aa14.32□□□□□ -0.12
TRERF1-202ENST00000354325 TULP2O00295 520 aa14.32□□□□□ -0.12
TRERF1-202ENST00000354325 H2AFXP16104 143 aaPredicted RBP14.32□□□□□ -0.12
TRERF1-202ENST00000354325 FAM160A1Q05DH4 1040 aa14.32□□□□□ -0.12
TRERF1-202ENST00000354325 LRRFIP1Q32MZ4 808 aaKnown RBP14.32□□□□□ -0.12
TRERF1-202ENST00000354325 HDGFL1Q5TGJ6 251 aa14.32□□□□□ -0.12
TRERF1-202ENST00000354325 DNAI1Q9UI46 699 aa14.32□□□□□ -0.12
TRERF1-202ENST00000354325 DLC1Q96QB1 1528 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms