RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SMIM23A6NLE4 172 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 TMC6Q7Z403 805 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 TCHPQ9BT92 498 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 CCDC174Q6PII3 467 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 JADE2Q9NQC1 790 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 A0A1W2PRG0 241 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 HMGB2P26583 209 aaKnown RBP11.49□□□□□ -0.57
COL11A1-201ENST00000353414 KRT28Q7Z3Y7 464 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 MTERF4Q7Z6M4 381 aaKnown RBP11.49□□□□□ -0.57
COL11A1-201ENST00000353414 FSIP1Q8NA03 581 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 MX1P20591 662 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 KRT32Q14532 448 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 KIF1BPQ96EK5 621 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 RAB11FIP3O75154 756 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 UBXN4Q92575 508 aa11.49□□□□□ -0.57
COL11A1-201ENST00000353414 EEF2P13639 858 aaKnown RBP11.48□□□□□ -0.57
COL11A1-201ENST00000353414 RAB34Q9BZG1 259 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 TMPOP42166 694 aaKnown RBP11.48□□□□□ -0.57
COL11A1-201ENST00000353414 PPP2R5CQ13362 524 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 CHST3Q7LGC8 479 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 SLF2Q8IX21 1173 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 CLIP2Q9UDT6 1046 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 GINS2Q9Y248 185 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 GCOM1H8Y6P7 765 aaPredicted RBP11.48□□□□□ -0.57
COL11A1-201ENST00000353414 MYZAPP0CAP1 466 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 CABLES1Q8TDN4 633 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 MXRA7P84157 204 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
COL11A1-201ENST00000353414 FNBP4Q8N3X1 1017 aaPredicted RBP11.48□□□□□ -0.57
COL11A1-201ENST00000353414 SAP30BPQ9UHR5 308 aaKnown RBP11.48□□□□□ -0.57
COL11A1-201ENST00000353414 FAM83GA6ND36 823 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 MFSD6Q6ZSS7 791 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 GSTA5Q7RTV2 222 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 RBM27Q9P2N5 1060 aaKnown RBP11.47□□□□□ -0.57
COL11A1-201ENST00000353414 ZYXQ15942 572 aaKnown RBP11.47□□□□□ -0.57
COL11A1-201ENST00000353414 C16orf45Q96MC5 204 aaPredicted RBP11.47□□□□□ -0.57
COL11A1-201ENST00000353414 SORBS3O60504 671 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 SETDB2Q96T68 719 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 TFCP2L1Q9NZI6 479 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 USP16Q9Y5T5 823 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 PTPN14Q15678 1187 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 NFE2L2Q16236 605 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 EMILIN1Q9Y6C2 1016 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 NCKAP5LQ9HCH0 1330 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
COL11A1-201ENST00000353414 SLC39A6Q13433 755 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 CCDC50Q8IVM0 306 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 TCP11L1Q9NUJ3 509 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 RAB3IL1Q8TBN0 382 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 PPM1EQ8WY54 764 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 ZSCAN31Q96LW9 406 aaPredicted RBP11.47□□□□□ -0.57
COL11A1-201ENST00000353414 IKBKGQ9Y6K9 419 aa11.47□□□□□ -0.57
COL11A1-201ENST00000353414 SHTN1A0MZ66 631 aa11.46□□□□□ -0.57
COL11A1-201ENST00000353414 FSD2A1L4K1 749 aa11.46□□□□□ -0.57
COL11A1-201ENST00000353414 CYP7A1P22680 504 aa11.46□□□□□ -0.57
COL11A1-201ENST00000353414 GIGYF2Q6Y7W6 1299 aaKnown RBP11.46□□□□□ -0.57
COL11A1-201ENST00000353414 NDC80O14777 642 aa11.46□□□□□ -0.57
COL11A1-201ENST00000353414 BAG3O95817 575 aa11.46□□□□□ -0.57
COL11A1-201ENST00000353414 KCNH5Q8NCM2 988 aa11.46□□□□□ -0.57
COL11A1-201ENST00000353414 TBCAO75347 108 aaKnown RBP11.46□□□□□ -0.58
COL11A1-201ENST00000353414 SFPQP23246 707 aaKnown RBP eCLIP11.46□□□□□ -0.58
COL11A1-201ENST00000353414 GJB2P29033 226 aa11.46□□□□□ -0.58
COL11A1-201ENST00000353414 METAP2P50579 478 aaKnown RBP eCLIP11.46□□□□□ -0.58
COL11A1-201ENST00000353414 PDE4BQ07343 736 aa11.46□□□□□ -0.58
COL11A1-201ENST00000353414 TCEANC2Q96MN5 208 aa11.46□□□□□ -0.58
COL11A1-201ENST00000353414 EXOC1Q9NV70 894 aa11.46□□□□□ -0.58
COL11A1-201ENST00000353414 STX6O43752 255 aa11.46□□□□□ -0.58
COL11A1-201ENST00000353414 ZWINTO95229 277 aa11.46□□□□□ -0.58
COL11A1-201ENST00000353414 NECAB1Q8N987 351 aa11.46□□□□□ -0.58
COL11A1-201ENST00000353414 FGFR1OPO95684 399 aaKnown RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 KRT13P13646 458 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 CETN1Q12798 172 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 IFIT1BQ5T764 474 aaKnown RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 OGFOD1Q8N543 542 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 USO1O60763 962 aaKnown RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 MAEAQ7L5Y9 396 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 MRRFQ96E11 262 aaKnown RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 CWC25Q9NXE8 425 aaPredicted RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 CCDC196A0A1B0GTZ2 297 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 CFAP58Q5T655 872 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 FBXO31Q5XUX0 539 aaPredicted RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 MPHOSPH6Q99547 160 aaKnown RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 SLC4A4Q9Y6R1 1079 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 RASA3Q14644 834 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 PPP2R5DQ14738 602 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 SPOUT1Q5T280 376 aaKnown RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 MIGA1Q8NAN2 632 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 CDC5LQ99459 802 aaKnown RBP11.45□□□□□ -0.58
COL11A1-201ENST00000353414 CCDC160A6NGH7 325 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 PAFAH1B1P43034 410 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 GPIHBP1Q8IV16 184 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 TIGD1Q96MW7 591 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 CLSTN2Q9H4D0 955 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 AMOTL2Q9Y2J4 779 aa11.45□□□□□ -0.58
COL11A1-201ENST00000353414 EIF6P56537 245 aaKnown RBP11.44□□□□□ -0.58
COL11A1-201ENST00000353414 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms