RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 RGS19P49795 217 aa12.82□□□□□ -0.36
MRPL55-204ENST00000348259 SCNN1DP51172 638 aa12.82□□□□□ -0.36
MRPL55-204ENST00000348259 EAPPQ56P03 285 aaPredicted RBP12.82□□□□□ -0.36
MRPL55-204ENST00000348259 TPTE2Q6XPS3 522 aa12.82□□□□□ -0.36
MRPL55-204ENST00000348259 SLC51AQ86UW1 340 aa12.82□□□□□ -0.36
MRPL55-204ENST00000348259 AIDAQ96BJ3 306 aa12.82□□□□□ -0.36
MRPL55-204ENST00000348259 DDX21Q9NR30 783 aaKnown RBP eCLIP12.82□□□□□ -0.36
MRPL55-204ENST00000348259 NIP7Q9Y221 180 aaKnown RBP eCLIP12.82□□□□□ -0.36
MRPL55-204ENST00000348259 LAMB2P55268 1798 aa12.81□□□□□ -0.36
MRPL55-204ENST00000348259 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
MRPL55-204ENST00000348259 FMR1Q06787 632 aaKnown RBP eCLIP12.81□□□□□ -0.36
MRPL55-204ENST00000348259 MAP2K1Q02750 393 aaPredicted RBP12.8□□□□□ -0.36
MRPL55-204ENST00000348259 CST9Q5W186 159 aa12.8□□□□□ -0.36
MRPL55-204ENST00000348259 ANKRD36CQ5JPF3 1778 aa12.79□□□□□ -0.36
MRPL55-204ENST00000348259 NPHP1O15259 732 aa12.79□□□□□ -0.36
MRPL55-204ENST00000348259 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
MRPL55-204ENST00000348259 MCM10Q7L590 875 aa12.79□□□□□ -0.36
MRPL55-204ENST00000348259 NPM2Q86SE8 214 aaKnown RBP12.79□□□□□ -0.36
MRPL55-204ENST00000348259 UBN2Q6ZU65 1347 aa12.79□□□□□ -0.36
MRPL55-204ENST00000348259 ERVV-1B6SEH8 477 aa12.78□□□□□ -0.36
MRPL55-204ENST00000348259 HTATSF1O43719 755 aaKnown RBP12.78□□□□□ -0.36
MRPL55-204ENST00000348259 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
MRPL55-204ENST00000348259 EPS15P42566 896 aa12.78□□□□□ -0.36
MRPL55-204ENST00000348259 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
MRPL55-204ENST00000348259 DCTN1Q14203 1278 aa12.77□□□□□ -0.37
MRPL55-204ENST00000348259 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
MRPL55-204ENST00000348259 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
MRPL55-204ENST00000348259 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.37
MRPL55-204ENST00000348259 CAPNS2Q96L46 248 aa12.77□□□□□ -0.37
MRPL55-204ENST00000348259 TLL2Q9Y6L7 1015 aa12.77□□□□□ -0.37
MRPL55-204ENST00000348259 CASP8AP2Q9UKL3 1982 aa12.77□□□□□ -0.37
MRPL55-204ENST00000348259 MAP3K15Q6ZN16 1313 aa12.77□□□□□ -0.37
MRPL55-204ENST00000348259 DUOX1Q9NRD9 1551 aa12.77□□□□□ -0.37
MRPL55-204ENST00000348259 LRRC37AA6NMS7 1700 aa12.76□□□□□ -0.37
MRPL55-204ENST00000348259 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
MRPL55-204ENST00000348259 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
MRPL55-204ENST00000348259 USP50Q70EL3 339 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-204ENST00000348259 LRP10Q7Z4F1 713 aa12.76□□□□□ -0.37
MRPL55-204ENST00000348259 JDP2Q8WYK2 163 aa12.76□□□□□ -0.37
MRPL55-204ENST00000348259 CRAMP1Q96RY5 1269 aa12.76□□□□□ -0.37
MRPL55-204ENST00000348259 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
MRPL55-204ENST00000348259 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
MRPL55-204ENST00000348259 TRAF5O00463 557 aa12.75□□□□□ -0.37
MRPL55-204ENST00000348259 NTSR2O95665 410 aa12.75□□□□□ -0.37
MRPL55-204ENST00000348259 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-204ENST00000348259 CYP4F22Q6NT55 531 aa12.75□□□□□ -0.37
MRPL55-204ENST00000348259 TTLL7Q6ZT98 887 aa12.75□□□□□ -0.37
MRPL55-204ENST00000348259 ZNF34Q8IZ26 560 aa12.75□□□□□ -0.37
MRPL55-204ENST00000348259 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
MRPL55-204ENST00000348259 ABT1Q9ULW3 272 aaKnown RBP12.75□□□□□ -0.37
MRPL55-204ENST00000348259 ZBED9Q6R2W3 1325 aa12.74□□□□□ -0.37
MRPL55-204ENST00000348259 ECE1P42892 770 aa12.74□□□□□ -0.37
MRPL55-204ENST00000348259 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
MRPL55-204ENST00000348259 HNRNPUQ00839 825 aaKnown RBP eCLIP12.74□□□□□ -0.37
MRPL55-204ENST00000348259 CNGB1Q14028 1251 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-204ENST00000348259 SAPCD2Q86UD0 394 aa12.74□□□□□ -0.37
MRPL55-204ENST00000348259 HHIPL1Q96JK4 782 aa12.74□□□□□ -0.37
MRPL55-204ENST00000348259 GPR101Q96P66 508 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-204ENST00000348259 RTFDC1Q9BY42 306 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-204ENST00000348259 GPRC5DQ9NZD1 345 aa12.74□□□□□ -0.37
MRPL55-204ENST00000348259 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
MRPL55-204ENST00000348259 TAF1P21675 1872 aa12.74□□□□□ -0.37
MRPL55-204ENST00000348259 MAP2K2P36507 400 aa12.73□□□□□ -0.37
MRPL55-204ENST00000348259 SUSD4Q5VX71 490 aa12.73□□□□□ -0.37
MRPL55-204ENST00000348259 VPS33BQ9H267 617 aa12.73□□□□□ -0.37
MRPL55-204ENST00000348259 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
MRPL55-204ENST00000348259 AOC2O75106 756 aa12.72□□□□□ -0.37
MRPL55-204ENST00000348259 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-204ENST00000348259 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
MRPL55-204ENST00000348259 CXCL9Q07325 125 aa12.72□□□□□ -0.37
MRPL55-204ENST00000348259 SLC10A5Q5PT55 438 aa12.72□□□□□ -0.37
MRPL55-204ENST00000348259 LARGE2Q8N3Y3 721 aa12.72□□□□□ -0.37
MRPL55-204ENST00000348259 RTF1Q92541 710 aaKnown RBP12.72□□□□□ -0.37
MRPL55-204ENST00000348259 ADARB2Q9NS39 739 aaKnown RBP12.72□□□□□ -0.37
MRPL55-204ENST00000348259 MIS18AQ9NYP9 233 aa12.72□□□□□ -0.37
MRPL55-204ENST00000348259 DDX60Q8IY21 1712 aaKnown RBP12.71□□□□□ -0.37
MRPL55-204ENST00000348259 CDHR2Q9BYE9 1310 aa12.71□□□□□ -0.37
MRPL55-204ENST00000348259 POLR2AP24928 1970 aaKnown RBP12.71□□□□□ -0.37
MRPL55-204ENST00000348259 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-204ENST00000348259 HIRAP54198 1017 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-204ENST00000348259 GIGYF2Q6Y7W6 1299 aaKnown RBP12.71□□□□□ -0.37
MRPL55-204ENST00000348259 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
MRPL55-204ENST00000348259 ATP6V0A2Q9Y487 856 aa12.71□□□□□ -0.37
MRPL55-204ENST00000348259 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
MRPL55-204ENST00000348259 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-204ENST00000348259 GPTP24298 496 aa12.7□□□□□ -0.38
MRPL55-204ENST00000348259 GTF2E1P29083 439 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-204ENST00000348259 BRPF1P55201 1214 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-204ENST00000348259 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
MRPL55-204ENST00000348259 MLLT1Q03111 559 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-204ENST00000348259 PDIA6Q15084 440 aa12.7□□□□□ -0.38
MRPL55-204ENST00000348259 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
MRPL55-204ENST00000348259 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
MRPL55-204ENST00000348259 NUDCQ9Y266 331 aa12.7□□□□□ -0.38
MRPL55-204ENST00000348259 COL4A1P02462 1669 aa12.7□□□□□ -0.38
MRPL55-204ENST00000348259 ABCC4O15439 1325 aa12.69□□□□□ -0.38
MRPL55-204ENST00000348259 CA12O43570 354 aa12.69□□□□□ -0.38
MRPL55-204ENST00000348259 AOC3Q16853 763 aa12.69□□□□□ -0.38
MRPL55-204ENST00000348259 NIM1KQ8IY84 436 aa12.69□□□□□ -0.38
MRPL55-204ENST00000348259 RBM17Q96I25 401 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms