RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 C7orf43Q8WVR3 580 aa15.52■□□□□ 0.07
TUBD1-203ENST00000346141 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.07
TUBD1-203ENST00000346141 TNRC6CQ9HCJ0 1690 aaKnown RBP15.52■□□□□ 0.07
TUBD1-203ENST00000346141 RIC1Q4ADV7 1423 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 UBN2Q6ZU65 1347 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 HOXB7P09629 217 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 GPTP24298 496 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 PROSER3Q2NL68 480 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 CRY2Q49AN0 593 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 CCDC93Q567U6 631 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 NUTM1Q86Y26 1132 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
TUBD1-203ENST00000346141 CFAP44Q96MT7 982 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 RRAGCQ9HB90 399 aa15.51■□□□□ 0.07
TUBD1-203ENST00000346141 ABCC12Q96J65 1359 aa15.5■□□□□ 0.07
TUBD1-203ENST00000346141 TIAM2Q8IVF5 1701 aa15.5■□□□□ 0.07
TUBD1-203ENST00000346141 ERFEQ4G0M1 354 aa15.5■□□□□ 0.07
TUBD1-203ENST00000346141 DPY19L2Q6NUT2 758 aa15.5■□□□□ 0.07
TUBD1-203ENST00000346141 PPP1R42Q7Z4L9 355 aa15.5■□□□□ 0.07
TUBD1-203ENST00000346141 CALD1Q05682 793 aaKnown RBP15.49■□□□□ 0.07
TUBD1-203ENST00000346141 HSP90AB3PQ58FF7 597 aa15.49■□□□□ 0.07
TUBD1-203ENST00000346141 SUSD4Q5VX71 490 aa15.49■□□□□ 0.07
TUBD1-203ENST00000346141 DDX21Q9NR30 783 aaKnown RBP eCLIP15.49■□□□□ 0.07
TUBD1-203ENST00000346141 APAF1O14727 1248 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 NTSR2O95665 410 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 ANXA1P04083 346 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 FSTL1Q12841 308 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 COPS6Q7L5N1 327 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 NECTIN2Q92692 538 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 RNF123Q5XPI4 1314 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 CACNA1SQ13698 1873 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 CCDC88AQ3V6T2 1871 aa15.48■□□□□ 0.07
TUBD1-203ENST00000346141 VEGFAP15692 232 aaPredicted RBP15.47■□□□□ 0.07
TUBD1-203ENST00000346141 APLP1P51693 650 aa15.47■□□□□ 0.07
TUBD1-203ENST00000346141 HDGFL1Q5TGJ6 251 aa15.47■□□□□ 0.07
TUBD1-203ENST00000346141 RTKN2Q8IZC4 609 aa15.47■□□□□ 0.07
TUBD1-203ENST00000346141 XAGE3Q8WTP9 111 aa15.47■□□□□ 0.07
TUBD1-203ENST00000346141 RPGRQ92834 1020 aaKnown RBP15.47■□□□□ 0.07
TUBD1-203ENST00000346141 HOXA10P31260 410 aaPredicted RBP15.46■□□□□ 0.07
TUBD1-203ENST00000346141 FKBP4Q02790 459 aaKnown RBP eCLIP15.46■□□□□ 0.07
TUBD1-203ENST00000346141 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
TUBD1-203ENST00000346141 UTP14AQ9BVJ6 771 aaKnown RBP15.46■□□□□ 0.07
TUBD1-203ENST00000346141 MBIPQ9NS73 344 aa15.46■□□□□ 0.07
TUBD1-203ENST00000346141 IFT57Q9NWB7 429 aa15.46■□□□□ 0.07
TUBD1-203ENST00000346141 CHPF2Q9P2E5 772 aa15.46■□□□□ 0.07
TUBD1-203ENST00000346141 DICER1Q9UPY3 1922 aaKnown RBP15.46■□□□□ 0.07
TUBD1-203ENST00000346141 ZNF853P0CG23 659 aa15.46■□□□□ 0.06
TUBD1-203ENST00000346141 GNAI1P63096 354 aa15.46■□□□□ 0.06
TUBD1-203ENST00000346141 CC2D2BQ6DHV5 1058 aa15.46■□□□□ 0.06
TUBD1-203ENST00000346141 DBF4Q9UBU7 674 aaPredicted RBP15.46■□□□□ 0.06
TUBD1-203ENST00000346141 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
TUBD1-203ENST00000346141 SMC1BQ8NDV3 1235 aa15.45■□□□□ 0.06
TUBD1-203ENST00000346141 RBM17Q96I25 401 aaKnown RBP15.45■□□□□ 0.06
TUBD1-203ENST00000346141 NLRP3Q96P20 1036 aa15.45■□□□□ 0.06
TUBD1-203ENST00000346141 TCIRG1Q13488 830 aa15.44■□□□□ 0.06
TUBD1-203ENST00000346141 GRIPAP1Q4V328 841 aa15.44■□□□□ 0.06
TUBD1-203ENST00000346141 SLC10A5Q5PT55 438 aa15.44■□□□□ 0.06
TUBD1-203ENST00000346141 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
TUBD1-203ENST00000346141 HYPKQ9NX55 129 aa15.44■□□□□ 0.06
TUBD1-203ENST00000346141 WDR90Q96KV7 1748 aa15.44■□□□□ 0.06
TUBD1-203ENST00000346141 ZNF316A6NFI3 1004 aaPredicted RBP15.43■□□□□ 0.06
TUBD1-203ENST00000346141 POTEHQ6S545 545 aa15.43■□□□□ 0.06
TUBD1-203ENST00000346141 OLFM4Q6UX06 510 aa15.43■□□□□ 0.06
TUBD1-203ENST00000346141 NLRP10Q86W26 655 aa15.43■□□□□ 0.06
TUBD1-203ENST00000346141 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
TUBD1-203ENST00000346141 PSMD1Q99460 953 aa15.43■□□□□ 0.06
TUBD1-203ENST00000346141 ZNF277Q9NRM2 450 aaPredicted RBP15.43■□□□□ 0.06
TUBD1-203ENST00000346141 ANKRD36CQ5JPF3 1778 aa15.42■□□□□ 0.06
TUBD1-203ENST00000346141 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
TUBD1-203ENST00000346141 POTECB2RU33 542 aa15.41■□□□□ 0.06
TUBD1-203ENST00000346141 ANKRD13DQ6ZTN6 518 aa15.41■□□□□ 0.06
TUBD1-203ENST00000346141 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
TUBD1-203ENST00000346141 SYNE4Q8N205 404 aa15.41■□□□□ 0.06
TUBD1-203ENST00000346141 CHMP4AQ9BY43 222 aa15.41■□□□□ 0.06
TUBD1-203ENST00000346141 TRMT112Q9UI30 125 aaKnown RBP15.41■□□□□ 0.06
TUBD1-203ENST00000346141 SH3TC1Q8TE82 1336 aa15.4■□□□□ 0.06
TUBD1-203ENST00000346141 PPEF1O14829 653 aaPredicted RBP15.4■□□□□ 0.06
TUBD1-203ENST00000346141 ANP32CO43423 234 aa15.4■□□□□ 0.06
TUBD1-203ENST00000346141 DDNO94850 711 aaPredicted RBP15.4■□□□□ 0.06
TUBD1-203ENST00000346141 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
TUBD1-203ENST00000346141 CCDC184Q52MB2 194 aa15.4■□□□□ 0.06
TUBD1-203ENST00000346141 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
TUBD1-203ENST00000346141 IQCA1LA6NCM1 817 aa15.4■□□□□ 0.06
TUBD1-203ENST00000346141 CCDC27Q2M243 656 aa15.4■□□□□ 0.06
TUBD1-203ENST00000346141 L3MBTL3Q96JM7 780 aaPredicted RBP15.4■□□□□ 0.06
TUBD1-203ENST00000346141 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
TUBD1-203ENST00000346141 MRS2Q9HD23 443 aa15.39■□□□□ 0.05
TUBD1-203ENST00000346141 ABCC4O15439 1325 aa15.38■□□□□ 0.05
TUBD1-203ENST00000346141 HCLS1P14317 486 aaPredicted RBP15.38■□□□□ 0.05
TUBD1-203ENST00000346141 GOLGA2Q08379 1002 aa15.38■□□□□ 0.05
TUBD1-203ENST00000346141 ISCA1Q9BUE6 129 aa15.38■□□□□ 0.05
TUBD1-203ENST00000346141 ZNF541Q9H0D2 1346 aa15.37■□□□□ 0.05
TUBD1-203ENST00000346141 FZD9O00144 591 aa15.37■□□□□ 0.05
TUBD1-203ENST00000346141 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
TUBD1-203ENST00000346141 BBOX1O75936 387 aa15.37■□□□□ 0.05
TUBD1-203ENST00000346141 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
TUBD1-203ENST00000346141 ATP6V0A2Q9Y487 856 aa15.37■□□□□ 0.05
TUBD1-203ENST00000346141 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
TUBD1-203ENST00000346141 DDX46Q7L014 1031 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms