RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 TMEM57Q8N5G2 664 aa11.31□□□□□ -0.6
SEC24C-202ENST00000345254 CRB1P82279 1406 aa11.31□□□□□ -0.6
SEC24C-202ENST00000345254 SSH1Q8WYL5 1049 aa11.31□□□□□ -0.6
SEC24C-202ENST00000345254 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
SEC24C-202ENST00000345254 AATKQ6ZMQ8 1374 aa11.31□□□□□ -0.6
SEC24C-202ENST00000345254 LETM1O95202 739 aaPredicted RBP11.31□□□□□ -0.6
SEC24C-202ENST00000345254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■■□□□ 12.9
SEC24C-202ENST00000345254 R3HCC1Q9Y3T6 440 aaKnown RBP11.31□□□□□ -0.6
SEC24C-202ENST00000345254 TPM3P06753 285 aa11.3□□□□□ -0.6
SEC24C-202ENST00000345254 USP5P45974 858 aa11.3□□□□□ -0.6
SEC24C-202ENST00000345254 FSD1Q9BTV5 496 aa11.3□□□□□ -0.6
SEC24C-202ENST00000345254 SYNE3Q6ZMZ3 975 aa11.3□□□□□ -0.6
SEC24C-202ENST00000345254 ZFYVE9O95405 1425 aa11.3□□□□□ -0.6
SEC24C-202ENST00000345254 ERC2O15083 957 aa11.3□□□□□ -0.6
SEC24C-202ENST00000345254 C21orf2O43822 256 aa11.3□□□□□ -0.6
SEC24C-202ENST00000345254 SUPT20HQ8NEM7 779 aa11.3□□□□□ -0.6
SEC24C-202ENST00000345254 TNPO1Q92973 898 aaKnown RBP11.3□□□□□ -0.6
SEC24C-202ENST00000345254 KIF1BO60333 1816 aa11.3□□□□□ -0.6
SEC24C-202ENST00000345254 CYP27B1O15528 508 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 ALKQ9UM73 1620 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 TRIM27P14373 513 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 CHMP4BP1P59074 171 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 LMBR1LQ6UX01 489 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 PKNOX2Q96KN3 472 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 OVOS2A0A0G2JMS6 1433 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 INO80Q9ULG1 1556 aaPredicted RBP11.29□□□□□ -0.6
SEC24C-202ENST00000345254 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
SEC24C-202ENST00000345254 AKAP17AQ02040 695 aaKnown RBP11.29□□□□□ -0.6
SEC24C-202ENST00000345254 BARGINQ6ZT62 677 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 PIK3C2BO00750 1634 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 RPAP2Q8IXW5 612 aaPredicted RBP11.29□□□□□ -0.6
SEC24C-202ENST00000345254 LRRC7Q96NW7 1537 aa11.29□□□□□ -0.6
SEC24C-202ENST00000345254 A0A0G2JLW4 131 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
SEC24C-202ENST00000345254 RUFY2Q8WXA3 655 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 GGA1Q9UJY5 639 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 KIF13AQ9H1H9 1805 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 SYNMO15061 1565 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 KCNQ3O43525 872 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
SEC24C-202ENST00000345254 SLF2Q8IX21 1173 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
SEC24C-202ENST00000345254 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■■□ 23.8
SEC24C-202ENST00000345254 IL1RAPL2Q9NP60 686 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 AKAP2Q9Y2D5 859 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 PRPF40AO75400 957 aaKnown RBP11.28□□□□□ -0.6
SEC24C-202ENST00000345254 SLC3A2P08195 630 aaKnown RBP11.28□□□□□ -0.6
SEC24C-202ENST00000345254 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
SEC24C-202ENST00000345254 DDX21Q9NR30 783 aaKnown RBP eCLIP11.28□□□□□ -0.6
SEC24C-202ENST00000345254 ERICH2A1L162 156 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 KLHL40Q2TBA0 621 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 AACSQ86V21 672 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 MTFR1LQ9H019 292 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 ANO2Q9NQ90 1003 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.6
SEC24C-202ENST00000345254 BCORL1Q5H9F3 1711 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 RPS6KA4O75676 772 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 MCM5P33992 734 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 SLC4A8Q2Y0W8 1093 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 NOL8Q76FK4 1167 aaKnown RBP11.27□□□□□ -0.6
SEC24C-202ENST00000345254 ZNF804AQ7Z570 1209 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 ERC1Q8IUD2 1116 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 AIDAQ96BJ3 306 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 PDCL3Q9H2J4 239 aa11.27□□□□□ -0.6
SEC24C-202ENST00000345254 FAM184AQ8NB25 1140 aa11.27□□□□□ -0.61
SEC24C-202ENST00000345254 TSPY26PQ9H489 355 aa11.27□□□□□ -0.61
SEC24C-202ENST00000345254 TECPR2O15040 1411 aa11.27□□□□□ -0.61
SEC24C-202ENST00000345254 NCOA3Q9Y6Q9 1424 aa11.27□□□□□ -0.61
SEC24C-202ENST00000345254 CDK11BP21127 795 aaKnown RBP11.27□□□□□ -0.61
SEC24C-202ENST00000345254 PTCH1Q13635 1447 aa11.27□□□□□ -0.61
SEC24C-202ENST00000345254 CWF19L2Q2TBE0 894 aaKnown RBP11.27□□□□□ -0.61
SEC24C-202ENST00000345254 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
SEC24C-202ENST00000345254 MST1RQ04912 1400 aa11.26□□□□□ -0.61
SEC24C-202ENST00000345254 NFXL1Q6ZNB6 911 aa11.26□□□□□ -0.61
SEC24C-202ENST00000345254 SMC5Q8IY18 1101 aa11.26□□□□□ -0.61
SEC24C-202ENST00000345254 SLC16A10Q8TF71 515 aa11.26□□□□□ -0.61
SEC24C-202ENST00000345254 KIF3AQ9Y496 699 aa11.26□□□□□ -0.61
SEC24C-202ENST00000345254 TRMT2AQ8IZ69 625 aaKnown RBP11.26□□□□□ -0.61
SEC24C-202ENST00000345254 TAOK3Q9H2K8 898 aa11.26□□□□□ -0.61
SEC24C-202ENST00000345254 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
SEC24C-202ENST00000345254 ZNF521Q96K83 1311 aa11.26□□□□□ -0.61
SEC24C-202ENST00000345254 KSR2Q6VAB6 950 aa11.26□□□□□ -0.61
SEC24C-202ENST00000345254 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
SEC24C-202ENST00000345254 NEK4P51957 841 aa11.25□□□□□ -0.61
SEC24C-202ENST00000345254 NUCB1Q02818 461 aa11.25□□□□□ -0.61
SEC24C-202ENST00000345254 TCIRG1Q13488 830 aa11.25□□□□□ -0.61
SEC24C-202ENST00000345254 RALYLQ86SE5 291 aaKnown RBP11.25□□□□□ -0.61
SEC24C-202ENST00000345254 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
SEC24C-202ENST00000345254 LDHCP07864 332 aa11.25□□□□□ -0.61
SEC24C-202ENST00000345254 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
SEC24C-202ENST00000345254 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.617e-17■■■■■ 33
SEC24C-202ENST00000345254 LRRFIP2Q9Y608 721 aaKnown RBP11.25□□□□□ -0.61
SEC24C-202ENST00000345254 SSH2Q76I76 1423 aa11.25□□□□□ -0.61
SEC24C-202ENST00000345254 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
SEC24C-202ENST00000345254 CCDC93Q567U6 631 aa11.25□□□□□ -0.61
SEC24C-202ENST00000345254 DCPSQ96C86 337 aaKnown RBP11.25□□□□□ -0.61
SEC24C-202ENST00000345254 NACAP1Q9BZK3 213 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms