RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 TOM1L2Q6ZVM7 507 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 MORC4Q8TE76 937 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 CALR3Q96L12 384 aaKnown RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 RMDN2Q96LZ7 410 aa7.53□□□□□ -1.2
PCDH18-201ENST00000344876 SCAND2PQ9GZW5 306 aaPredicted RBP7.53□□□□□ -1.2
PCDH18-201ENST00000344876 TATP17735 454 aaPredicted RBP7.52□□□□□ -1.21
PCDH18-201ENST00000344876 ZSCAN23Q3MJ62 389 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 TTC36A6NLP5 189 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 NBPF7P0C2Y1 421 aaPredicted RBP7.52□□□□□ -1.21
PCDH18-201ENST00000344876 RFC1P35251 1148 aaPredicted RBP7.52□□□□□ -1.21
PCDH18-201ENST00000344876 WASF1Q92558 559 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 MPP4Q96JB8 637 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 TCEANC2Q96MN5 208 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 MKNK2Q9HBH9 465 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 MIA2Q96PC5 1412 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 PTCD1O75127 700 aaKnown RBP7.52□□□□□ -1.21
PCDH18-201ENST00000344876 BAG4O95429 457 aaKnown RBP7.52□□□□□ -1.21
PCDH18-201ENST00000344876 KIF5BP33176 963 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 NECAB1Q8N987 351 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 FSD2A1L4K1 749 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 GOLGA8BA8MQT2 603 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 PRC1O43663 620 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 CCDC40Q4G0X9 1142 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 VPS36Q86VN1 386 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 NAP1L3Q99457 506 aaPredicted RBP7.52□□□□□ -1.21
PCDH18-201ENST00000344876 RABEP2Q9H5N1 569 aa7.52□□□□□ -1.21
PCDH18-201ENST00000344876 SEC63Q9UGP8 760 aaKnown RBP7.52□□□□□ -1.21
PCDH18-201ENST00000344876 A0A1W2PRG0 241 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 STK10O94804 968 aaKnown RBP7.51□□□□□ -1.21
PCDH18-201ENST00000344876 CCDC186Q7Z3E2 898 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 KRT222Q8N1A0 295 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 PPP1R14CQ8TAE6 165 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 CDK19Q9BWU1 502 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 LRRC2Q9BYS8 371 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 HSF2BPO75031 334 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 MCM3P25205 808 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 NLRP5P59047 1200 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 SPECC1LQ69YQ0 1117 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 JARID2Q92833 1246 aaPredicted RBP7.51□□□□□ -1.21
PCDH18-201ENST00000344876 CAPZA3Q96KX2 299 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 FEZ2Q9UHY8 353 aaPredicted RBP7.51□□□□□ -1.21
PCDH18-201ENST00000344876 ANAPC4Q9UJX5 808 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 ZEB2O60315 1214 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 HSPA4P34932 840 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 AFMP43652 599 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 NUCB1Q02818 461 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 SF3A3Q12874 501 aaKnown RBP eCLIP7.51□□□□□ -1.21
PCDH18-201ENST00000344876 CEP112Q8N8E3 955 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 SNRKQ9NRH2 765 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 PFDN1O60925 122 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 LRRC43Q8N309 656 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 ALS2CR12Q96Q35 445 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 NAPBQ9H115 298 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 TAOK3Q9H2K8 898 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 ATG3Q9NT62 314 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 U3KPZ7 1027 aaPredicted RBP7.51□□□□□ -1.21
PCDH18-201ENST00000344876 IFIT1P09914 478 aaKnown RBP7.51□□□□□ -1.21
PCDH18-201ENST00000344876 GJC1P36383 396 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 ARL1P40616 181 aaPredicted RBP7.51□□□□□ -1.21
PCDH18-201ENST00000344876 NOLC1Q14978 699 aaKnown RBP eCLIP7.51□□□□□ -1.21
PCDH18-201ENST00000344876 PPM1EQ8WY54 764 aa7.51□□□□□ -1.21
PCDH18-201ENST00000344876 CAPN2P17655 700 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 ARID5AQ03989 594 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 USHBP1Q8N6Y0 703 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 SSH1Q8WYL5 1049 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 SLC12A7Q9Y666 1083 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 GOLGA8AA7E2F4 631 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 IFIT3O14879 490 aaKnown RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 STX6O43752 255 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 PDE1CQ14123 709 aaPredicted RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 WHAMMP3Q1A5X7 153 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 MYD88Q99836 296 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 DDX23Q9BUQ8 820 aaKnown RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 VPS18Q9P253 973 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 ZNF219Q9P2Y4 722 aaPredicted RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 CNPY2Q9Y2B0 182 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 RABGAP1Q9Y3P9 1069 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 SKILP12757 684 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 STX1AQ16623 288 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 ANO6Q4KMQ2 910 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 NAA15Q9BXJ9 866 aaKnown RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 HGSO14964 777 aaPredicted RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 KIF1CO43896 1103 aaKnown RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 ZNF500O60304 480 aaPredicted RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 XRCC6P12956 609 aaKnown RBP eCLIP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 SLFN5Q08AF3 891 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 MICU3Q86XE3 530 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 RPAP2Q8IXW5 612 aaPredicted RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 SELENOSQ9BQE4 189 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 FAM114A2Q9NRY5 505 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 N4BP3O15049 544 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 GMNNO75496 209 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 SSRP1Q08945 709 aaKnown RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 KARSQ15046 597 aaKnown RBP7.5□□□□□ -1.21
PCDH18-201ENST00000344876 DUSP27Q5VZP5 1158 aa7.5□□□□□ -1.21
PCDH18-201ENST00000344876 PRPHP41219 470 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 UBASH3AP57075 661 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 PSMD6Q15008 389 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 AMOTQ4VCS5 1084 aa7.49□□□□□ -1.21
PCDH18-201ENST00000344876 MSL1Q68DK7 614 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms