RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 TSPYL1Q9H0U9 437 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 DACT1Q9NYF0 836 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
RPL28-201ENST00000344063 TMC6Q7Z403 805 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 AKAP2Q9Y2D5 859 aa12.7□□□□□ -0.38
RPL28-201ENST00000344063 LMAN1P49257 510 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 SNW1Q13573 536 aaKnown RBP12.69□□□□□ -0.38
RPL28-201ENST00000344063 RRP12Q5JTH9 1297 aaKnown RBP12.69□□□□□ -0.38
RPL28-201ENST00000344063 FAM200AQ8TCP9 573 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 PIBF1Q8WXW3 757 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 IFIT1P09914 478 aaKnown RBP12.69□□□□□ -0.38
RPL28-201ENST00000344063 TOM1L2Q6ZVM7 507 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 SMARCE1Q969G3 411 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 RBM8AQ9Y5S9 174 aaKnown RBP12.69□□□□□ -0.38
RPL28-201ENST00000344063 ANXA1P04083 346 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 TERF1P54274 439 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 GTF3C6Q969F1 213 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 EYA1Q99502 592 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 PAXBP1Q9Y5B6 917 aa12.69□□□□□ -0.38
RPL28-201ENST00000344063 CCDC69A6NI79 296 aa12.68□□□□□ -0.38
RPL28-201ENST00000344063 FOXO3O43524 673 aa12.68□□□□□ -0.38
RPL28-201ENST00000344063 NAP1L1P55209 391 aaKnown RBP12.68□□□□□ -0.38
RPL28-201ENST00000344063 BMS1Q14692 1282 aaKnown RBP12.68□□□□□ -0.38
RPL28-201ENST00000344063 MEX3CQ5U5Q3 659 aaKnown RBP12.68□□□□□ -0.38
RPL28-201ENST00000344063 ZSCAN16Q9H4T2 348 aaPredicted RBP12.68□□□□□ -0.38
RPL28-201ENST00000344063 MAP3K19Q56UN5 1328 aa12.68□□□□□ -0.38
RPL28-201ENST00000344063 A0A087WZG4 1122 aa12.68□□□□□ -0.38
RPL28-201ENST00000344063 ZNF500O60304 480 aaPredicted RBP12.68□□□□□ -0.38
RPL28-201ENST00000344063 CPA1P15085 419 aa12.68□□□□□ -0.38
RPL28-201ENST00000344063 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
RPL28-201ENST00000344063 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
RPL28-201ENST00000344063 KIAA0232Q92628 1395 aa12.68□□□□□ -0.38
RPL28-201ENST00000344063 CROCC2H7BZ55 1655 aa12.68□□□□□ -0.38
RPL28-201ENST00000344063 C8orf76Q96K31 380 aa12.68□□□□□ -0.38
RPL28-201ENST00000344063 AOX1Q06278 1338 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 G2E3Q7L622 706 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 WASF1Q92558 559 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 CLSTN1O94985 981 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 KIF20AO95235 890 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 AK2P54819 239 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 GPATCH11Q8N954 259 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 GPT2Q8TD30 523 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 DEF6Q9H4E7 631 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 TXLNAP40222 546 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 CEBPAP49715 358 aaPredicted RBP12.67□□□□□ -0.38
RPL28-201ENST00000344063 TYRO3Q06418 890 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 PRDM11Q9NQV5 511 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 UNC13BO14795 1591 aa12.67□□□□□ -0.38
RPL28-201ENST00000344063 GRM8O00222 908 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 STX1AQ16623 288 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 ERCC4Q92889 916 aaPredicted RBP12.66□□□□□ -0.38
RPL28-201ENST00000344063 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 HSP90AB3PQ58FF7 597 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 AKAP4Q5JQC9 854 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 FAM173BQ6P4H8 233 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 EIF3JO75822 258 aaKnown RBP12.66□□□□□ -0.38
RPL28-201ENST00000344063 PPFIBP1Q86W92 1011 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 FSIP1Q8NA03 581 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 LINS1Q8NG48 757 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 CLASP1Q7Z460 1538 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 EPB41L2O43491 1005 aaKnown RBP12.66□□□□□ -0.38
RPL28-201ENST00000344063 ERLIN1O75477 346 aa12.66□□□□□ -0.38
RPL28-201ENST00000344063 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
RPL28-201ENST00000344063 GSDMDP57764 484 aa12.65□□□□□ -0.38
RPL28-201ENST00000344063 VPS53Q5VIR6 699 aa12.65□□□□□ -0.38
RPL28-201ENST00000344063 DNAI1Q9UI46 699 aa12.65□□□□□ -0.38
RPL28-201ENST00000344063 RDXP35241 583 aaKnown RBP12.65□□□□□ -0.38
RPL28-201ENST00000344063 LRRIQ1Q96JM4 1722 aa12.65□□□□□ -0.38
RPL28-201ENST00000344063 CCT2P78371 535 aaKnown RBP12.65□□□□□ -0.38
RPL28-201ENST00000344063 HSP90AA4PQ58FG1 418 aa12.65□□□□□ -0.38
RPL28-201ENST00000344063 GNL3LQ9NVN8 582 aaKnown RBP12.65□□□□□ -0.38
RPL28-201ENST00000344063 GSPT1P15170 499 aaKnown RBP12.65□□□□□ -0.39
RPL28-201ENST00000344063 UBE3BQ7Z3V4 1068 aa12.65□□□□□ -0.39
RPL28-201ENST00000344063 UGGT1Q9NYU2 1555 aa12.65□□□□□ -0.39
RPL28-201ENST00000344063 KIF1BO60333 1816 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 SLC3A2P08195 630 aaKnown RBP12.64□□□□□ -0.39
RPL28-201ENST00000344063 STRN4Q9NRL3 753 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 RAD50Q92878 1312 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 IDH1O75874 414 aaKnown RBP12.64□□□□□ -0.39
RPL28-201ENST00000344063 IPO4Q8TEX9 1081 aaKnown RBP12.64□□□□□ -0.39
RPL28-201ENST00000344063 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 TET3O43151 1660 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 SYT1P21579 422 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 METTL24Q5JXM2 366 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 FEZ1Q99689 392 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 IFNL2Q8IZJ0 200 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
RPL28-201ENST00000344063 POLR1AO95602 1720 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms