RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 LARP1BQ659C4 914 aaKnown RBP11.44□□□□□ -0.58
HOXA1-201ENST00000343060 LEO1Q8WVC0 666 aaPredicted RBP11.44□□□□□ -0.58
HOXA1-201ENST00000343060 ERO1AQ96HE7 468 aa11.44□□□□□ -0.58
HOXA1-201ENST00000343060 TPCN1Q9ULQ1 816 aa11.44□□□□□ -0.58
HOXA1-201ENST00000343060 ZNF165P49910 485 aa11.44□□□□□ -0.58
HOXA1-201ENST00000343060 CAMK4Q16566 473 aa11.44□□□□□ -0.58
HOXA1-201ENST00000343060 HSP90AB4PQ58FF6 505 aa11.44□□□□□ -0.58
HOXA1-201ENST00000343060 LRRC8AQ8IWT6 810 aa11.44□□□□□ -0.58
HOXA1-201ENST00000343060 DRC7Q8IY82 874 aa11.44□□□□□ -0.58
HOXA1-201ENST00000343060 CKAP2LQ8IYA6 745 aa11.44□□□□□ -0.58
HOXA1-201ENST00000343060 IQCB1Q15051 598 aa11.43□□□□□ -0.58
HOXA1-201ENST00000343060 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
HOXA1-201ENST00000343060 SBNO1A3KN83 1393 aa11.43□□□□□ -0.58
HOXA1-201ENST00000343060 FLT4P35916 1363 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 JCADQ9P266 1359 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 RNF20Q5VTR2 975 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 NECAB1Q8N987 351 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
HOXA1-201ENST00000343060 SPATA32Q96LK8 384 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 ZNF215Q9UL58 517 aaPredicted RBP11.42□□□□□ -0.58
HOXA1-201ENST00000343060 ADCY9O60503 1353 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 MYH15Q9Y2K3 1946 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 PLEKHG3A1L390 1219 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
HOXA1-201ENST00000343060 MTX1Q13505 466 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 CREB3L3Q68CJ9 461 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 PGBD1Q96JS3 809 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 DNAJC25Q9H1X3 360 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 AGLP35573 1532 aa11.42□□□□□ -0.58
HOXA1-201ENST00000343060 NWD1Q149M9 1564 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 NPHP4O75161 1426 aaPredicted RBP11.41□□□□□ -0.58
HOXA1-201ENST00000343060 KIF2AO00139 706 aaPredicted RBP11.41□□□□□ -0.58
HOXA1-201ENST00000343060 NR1I2O75469 434 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 ZKSCAN1P17029 563 aaPredicted RBP11.41□□□□□ -0.58
HOXA1-201ENST00000343060 CCZ1BP86790 482 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 CCZ1P86791 482 aaPredicted RBP11.41□□□□□ -0.58
HOXA1-201ENST00000343060 SLC20A2Q08357 652 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 ANKRD1Q15327 319 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 FBXO38Q6PIJ6 1188 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 DIP2AQ14689 1571 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
HOXA1-201ENST00000343060 PTPRUQ92729 1446 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 USP27XA6NNY8 438 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 SRGAP3O43295 1099 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 PSMA5P28066 241 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 PTPN14Q15678 1187 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 FAM173BQ6P4H8 233 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 FERMT3Q86UX7 667 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 MAP4K1Q92918 833 aa11.41□□□□□ -0.58
HOXA1-201ENST00000343060 RBM8AQ9Y5S9 174 aaKnown RBP11.41□□□□□ -0.58
HOXA1-201ENST00000343060 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
HOXA1-201ENST00000343060 GOLGA6L4A6NEF3 574 aa11.4□□□□□ -0.58
HOXA1-201ENST00000343060 H2AFXP16104 143 aaPredicted RBP11.4□□□□□ -0.59
HOXA1-201ENST00000343060 RESTQ13127 1097 aa11.4□□□□□ -0.59
HOXA1-201ENST00000343060 TXNDC2Q86VQ3 553 aa11.4□□□□□ -0.59
HOXA1-201ENST00000343060 CCAR2Q8N163 923 aaKnown RBP11.4□□□□□ -0.59
HOXA1-201ENST00000343060 EVI5LQ96CN4 794 aa11.4□□□□□ -0.59
HOXA1-201ENST00000343060 L2HGDHQ9H9P8 463 aa11.4□□□□□ -0.59
HOXA1-201ENST00000343060 ECHDC1Q9NTX5 307 aa11.4□□□□□ -0.59
HOXA1-201ENST00000343060 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.59
HOXA1-201ENST00000343060 SLC27A2O14975 620 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 CTAGE5O15320 804 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 SLU7O95391 586 aaKnown RBP11.39□□□□□ -0.59
HOXA1-201ENST00000343060 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
HOXA1-201ENST00000343060 ACEP12821 1306 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 MED23Q9ULK4 1368 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 HIP1O00291 1037 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 DTNBO60941 627 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 SKILP12757 684 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 RPS6KB1P23443 525 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 TOB2Q14106 344 aaPredicted RBP11.39□□□□□ -0.59
HOXA1-201ENST00000343060 ELF2Q15723 593 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 STX1AQ16623 288 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 TSGA10IPQ3SY00 556 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 TIGD1Q96MW7 591 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 ZNF446Q9NWS9 450 aa11.39□□□□□ -0.59
HOXA1-201ENST00000343060 KDM3BQ7LBC6 1761 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 GNAT3A8MTJ3 354 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 TULP2O00295 520 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 KCNJ6P48051 423 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 BEND3Q5T5X7 828 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 C11orf57Q6ZUT1 292 aaPredicted RBP11.38□□□□□ -0.59
HOXA1-201ENST00000343060 EYA1Q99502 592 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 CALCOCO1Q9P1Z2 691 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 CCDC69A6NI79 296 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 GOLGA6L19H0YKK7 550 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
HOXA1-201ENST00000343060 ARID5BQ14865 1188 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 BICD2Q8TD16 824 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 GPATCH3Q96I76 525 aa11.38□□□□□ -0.59
HOXA1-201ENST00000343060 OSBPL5Q9H0X9 879 aaPredicted RBP11.38□□□□□ -0.59
HOXA1-201ENST00000343060 USP54Q70EL1 1684 aa11.37□□□□□ -0.59
HOXA1-201ENST00000343060 NBPF7P0C2Y1 421 aaPredicted RBP11.37□□□□□ -0.59
HOXA1-201ENST00000343060 GSDMDP57764 484 aa11.37□□□□□ -0.59
HOXA1-201ENST00000343060 COL9A3Q14050 684 aaPredicted RBP11.37□□□□□ -0.59
HOXA1-201ENST00000343060 HDGFL1Q5TGJ6 251 aa11.37□□□□□ -0.59
HOXA1-201ENST00000343060 BLOC1S2Q6QNY1 142 aa11.37□□□□□ -0.59
HOXA1-201ENST00000343060 CLASRPQ8N2M8 674 aaKnown RBP11.37□□□□□ -0.59
HOXA1-201ENST00000343060 ZNF592Q92610 1267 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms