RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 PARP10Q53GL7 1025 aa26.43■■□□□ 1.82
SDHC-201ENST00000342751 C3orf67Q6ZVT6 689 aa26.43■■□□□ 1.82
SDHC-201ENST00000342751 SMC1BQ8NDV3 1235 aa26.43■■□□□ 1.82
SDHC-201ENST00000342751 ZEB1P37275 1124 aaPredicted RBP26.42■■□□□ 1.82
SDHC-201ENST00000342751 HTRA3P83110 453 aa26.42■■□□□ 1.82
SDHC-201ENST00000342751 CRY2Q49AN0 593 aa26.42■■□□□ 1.82
SDHC-201ENST00000342751 DNAJC5GQ8N7S2 189 aa26.42■■□□□ 1.82
SDHC-201ENST00000342751 UTP14AQ9BVJ6 771 aaKnown RBP26.42■■□□□ 1.82
SDHC-201ENST00000342751 DDX21Q9NR30 783 aaKnown RBP eCLIP26.42■■□□□ 1.82
SDHC-201ENST00000342751 MBIPQ9NS73 344 aa26.42■■□□□ 1.82
SDHC-201ENST00000342751 DDNO94850 711 aaPredicted RBP26.41■■□□□ 1.82
SDHC-201ENST00000342751 CFAP44Q96MT7 982 aa26.41■■□□□ 1.82
SDHC-201ENST00000342751 CCDC184Q52MB2 194 aa26.4■■□□□ 1.82
SDHC-201ENST00000342751 DUSP27Q5VZP5 1158 aa26.4■■□□□ 1.82
SDHC-201ENST00000342751 SLC51AQ86UW1 340 aa26.4■■□□□ 1.82
SDHC-201ENST00000342751 RTKN2Q8IZC4 609 aa26.4■■□□□ 1.82
SDHC-201ENST00000342751 ANKRD36CQ5JPF3 1778 aa26.4■■□□□ 1.82
SDHC-201ENST00000342751 RIC1Q4ADV7 1423 aa26.39■■□□□ 1.82
SDHC-201ENST00000342751 SYNE4Q8N205 404 aa26.39■■□□□ 1.82
SDHC-201ENST00000342751 RBM17Q96I25 401 aaKnown RBP26.39■■□□□ 1.82
SDHC-201ENST00000342751 HSP90AB3PQ58FF7 597 aa26.38■■□□□ 1.81
SDHC-201ENST00000342751 POTECB2RU33 542 aa26.37■■□□□ 1.81
SDHC-201ENST00000342751 PPEF1O14829 653 aaPredicted RBP26.37■■□□□ 1.81
SDHC-201ENST00000342751 NLRP3Q96P20 1036 aa26.37■■□□□ 1.81
SDHC-201ENST00000342751 ELL2O00472 640 aaPredicted RBP26.36■■□□□ 1.81
SDHC-201ENST00000342751 IARSP41252 1262 aaKnown RBP26.36■■□□□ 1.81
SDHC-201ENST00000342751 NLRP10Q86W26 655 aa26.36■■□□□ 1.81
SDHC-201ENST00000342751 ZNF541Q9H0D2 1346 aa26.36■■□□□ 1.81
SDHC-201ENST00000342751 HOXB7P09629 217 aa26.35■■□□□ 1.81
SDHC-201ENST00000342751 HCLS1P14317 486 aaPredicted RBP26.35■■□□□ 1.81
SDHC-201ENST00000342751 HOXA10P31260 410 aaPredicted RBP26.35■■□□□ 1.81
SDHC-201ENST00000342751 TCIRG1Q13488 830 aa26.35■■□□□ 1.81
SDHC-201ENST00000342751 DBF4Q9UBU7 674 aaPredicted RBP26.35■■□□□ 1.81
SDHC-201ENST00000342751 TRMT112Q9UI30 125 aaKnown RBP26.35■■□□□ 1.81
SDHC-201ENST00000342751 CALD1Q05682 793 aaKnown RBP26.34■■□□□ 1.81
SDHC-201ENST00000342751 IFT57Q9NWB7 429 aa26.34■■□□□ 1.81
SDHC-201ENST00000342751 GNAI1P63096 354 aa26.33■■□□□ 1.81
SDHC-201ENST00000342751 KLRG1Q96E93 195 aa26.33■■□□□ 1.81
SDHC-201ENST00000342751 CRAMP1Q96RY5 1269 aa26.33■■□□□ 1.81
SDHC-201ENST00000342751 ZNF853P0CG23 659 aa26.32■■□□□ 1.8
SDHC-201ENST00000342751 PLBD2Q8NHP8 589 aa26.32■■□□□ 1.8
SDHC-201ENST00000342751 ATP5J2-PTCD1G3V325 749 aa26.31■■□□□ 1.8
SDHC-201ENST00000342751 ANKRD13DQ6ZTN6 518 aa26.31■■□□□ 1.8
SDHC-201ENST00000342751 ABCC4O15439 1325 aa26.31■■□□□ 1.8
SDHC-201ENST00000342751 LAMB2P55268 1798 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 POTEIP0CG38 1075 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 POTEJP0CG39 1038 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 IFFO2Q5TF58 517 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 CC2D2BQ6DHV5 1058 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 PSMD1Q99460 953 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 TMX4Q9H1E5 349 aaPredicted RBP26.3■■□□□ 1.8
SDHC-201ENST00000342751 HYPKQ9NX55 129 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 RNF123Q5XPI4 1314 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 SH3TC1Q8TE82 1336 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 SNED1Q8TER0 1413 aa26.3■■□□□ 1.8
SDHC-201ENST00000342751 ZNF316A6NFI3 1004 aaPredicted RBP26.29■■□□□ 1.8
SDHC-201ENST00000342751 SLC10A5Q5PT55 438 aa26.29■■□□□ 1.8
SDHC-201ENST00000342751 JDP2Q8WYK2 163 aa26.29■■□□□ 1.8
SDHC-201ENST00000342751 MRS2Q9HD23 443 aa26.29■■□□□ 1.8
SDHC-201ENST00000342751 RTL5Q5HYW3 569 aaPredicted RBP26.28■■□□□ 1.8
SDHC-201ENST00000342751 IQCA1LA6NCM1 817 aa26.27■■□□□ 1.8
SDHC-201ENST00000342751 ANP32CO43423 234 aa26.27■■□□□ 1.8
SDHC-201ENST00000342751 EAPPQ56P03 285 aaPredicted RBP26.27■■□□□ 1.8
SDHC-201ENST00000342751 LARGE2Q8N3Y3 721 aa26.27■■□□□ 1.8
SDHC-201ENST00000342751 C8orf58Q8NAV2 365 aa26.27■■□□□ 1.8
SDHC-201ENST00000342751 GJA3Q9Y6H8 435 aa26.27■■□□□ 1.8
SDHC-201ENST00000342751 COL4A5P29400 1685 aa26.26■■□□□ 1.79
SDHC-201ENST00000342751 GOLGA2Q08379 1002 aa26.26■■□□□ 1.79
SDHC-201ENST00000342751 RIC3Q7Z5B4 369 aa26.26■■□□□ 1.79
SDHC-201ENST00000342751 PHAXQ9H814 394 aaKnown RBP26.26■■□□□ 1.79
SDHC-201ENST00000342751 CHADLQ6NUI6 762 aa26.25■■□□□ 1.79
SDHC-201ENST00000342751 DDX46Q7L014 1031 aaKnown RBP26.25■■□□□ 1.79
SDHC-201ENST00000342751 TSR2Q969E8 191 aaKnown RBP26.25■■□□□ 1.79
SDHC-201ENST00000342751 FAM89AQ96GI7 184 aa26.25■■□□□ 1.79
SDHC-201ENST00000342751 L3MBTL3Q96JM7 780 aaPredicted RBP26.25■■□□□ 1.79
SDHC-201ENST00000342751 SCN4AP35499 1836 aa26.24■■□□□ 1.79
SDHC-201ENST00000342751 FZD9O00144 591 aa26.24■■□□□ 1.79
SDHC-201ENST00000342751 EIF6P56537 245 aaKnown RBP26.24■■□□□ 1.79
SDHC-201ENST00000342751 JMYQ8N9B5 988 aa26.24■■□□□ 1.79
SDHC-201ENST00000342751 ISCA1Q9BUE6 129 aa26.24■■□□□ 1.79
SDHC-201ENST00000342751 TAF1DQ9H5J8 278 aaPredicted RBP26.24■■□□□ 1.79
SDHC-201ENST00000342751 ATP6V0A2Q9Y487 856 aa26.24■■□□□ 1.79
SDHC-201ENST00000342751 PPIP5K2O43314 1243 aa26.23■■□□□ 1.79
SDHC-201ENST00000342751 HACL1Q9UJ83 578 aa26.23■■□□□ 1.79
SDHC-201ENST00000342751 DDX60Q8IY21 1712 aaKnown RBP26.22■■□□□ 1.79
SDHC-201ENST00000342751 AOC3Q16853 763 aa26.22■■□□□ 1.79
SDHC-201ENST00000342751 GRIPAP1Q4V328 841 aa26.22■■□□□ 1.79
SDHC-201ENST00000342751 NIM1KQ8IY84 436 aa26.22■■□□□ 1.79
SDHC-201ENST00000342751 CLEC11AQ9Y240 323 aa26.22■■□□□ 1.79
SDHC-201ENST00000342751 SALL2Q9Y467 1007 aaPredicted RBP26.22■■□□□ 1.79
SDHC-201ENST00000342751 TAF1P21675 1872 aa26.21■■□□□ 1.79
SDHC-201ENST00000342751 TSPYL6Q8N831 410 aa26.21■■□□□ 1.79
SDHC-201ENST00000342751 MYD88Q99836 296 aa26.21■■□□□ 1.79
SDHC-201ENST00000342751 EPHX2P34913 555 aa26.2■■□□□ 1.78
SDHC-201ENST00000342751 GRAPQ13588 217 aa26.2■■□□□ 1.78
SDHC-201ENST00000342751 DPP8Q6V1X1 898 aaPredicted RBP26.2■■□□□ 1.78
SDHC-201ENST00000342751 GPC2Q8N158 579 aa26.2■■□□□ 1.78
SDHC-201ENST00000342751 GRAPLQ8TC17 118 aaPredicted RBP26.2■■□□□ 1.78
SDHC-201ENST00000342751 BBOX1O75936 387 aa26.19■■□□□ 1.78
SDHC-201ENST00000342751 CCDC30Q5VVM6 783 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms