RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 STIM1Q13586 685 aa18.26■□□□□ 0.51
CARMIL3-201ENST00000342740 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
CARMIL3-201ENST00000342740 SEC24BO95487 1268 aa18.26■□□□□ 0.51
CARMIL3-201ENST00000342740 ZFYP08048 801 aaPredicted RBP18.26■□□□□ 0.51
CARMIL3-201ENST00000342740 HOXB7P09629 217 aa18.26■□□□□ 0.51
CARMIL3-201ENST00000342740 TMOD2Q9NZR1 351 aa18.26■□□□□ 0.51
CARMIL3-201ENST00000342740 TTC41PQ6P2S7 1318 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 GOLGA8AA7E2F4 631 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 BRF1Q92994 677 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 PCDH11XQ9BZA7 1347 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 PCDH11YQ9BZA8 1340 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 TTLL5Q6EMB2 1281 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 BTG4Q9NY30 223 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 CCDC183Q5T5S1 534 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 SMARCE1Q969G3 411 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 CEP131Q9UPN4 1083 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 C8orf37Q96NL8 207 aa18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 NIP7Q9Y221 180 aaKnown RBP eCLIP18.25■□□□□ 0.51
CARMIL3-201ENST00000342740 FILIP1Q7Z7B0 1213 aa18.24■□□□□ 0.51
CARMIL3-201ENST00000342740 DZIP3Q86Y13 1208 aaKnown RBP18.24■□□□□ 0.51
CARMIL3-201ENST00000342740 NCOA7Q8NI08 942 aa18.24■□□□□ 0.51
CARMIL3-201ENST00000342740 ZHX3Q9H4I2 956 aa18.24■□□□□ 0.51
CARMIL3-201ENST00000342740 PPFIA3O75145 1194 aa18.24■□□□□ 0.51
CARMIL3-201ENST00000342740 MCMDC2Q4G0Z9 681 aa18.24■□□□□ 0.51
CARMIL3-201ENST00000342740 METP08581 1390 aa18.24■□□□□ 0.51
CARMIL3-201ENST00000342740 NECAB1Q8N987 351 aa18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 ESPNB1AK53 854 aa18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 MPHOSPH10O00566 681 aaKnown RBP18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 TMEM67Q5HYA8 995 aa18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 BICC1Q9H694 974 aaKnown RBP18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 MICU3Q86XE3 530 aa18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 ANKRD18AQ8IVF6 992 aa18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 CRACR2BQ8N4Y2 399 aaPredicted RBP18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 ORC3Q9UBD5 711 aaPredicted RBP18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 SSBP05455 408 aaKnown RBP eCLIP18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 SNX21Q969T3 373 aa18.23■□□□□ 0.51
CARMIL3-201ENST00000342740 ERVK-7P63135 1459 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 SETDB2Q96T68 719 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 IQSEC3Q9UPP2 1182 aaPredicted RBP18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 KDM5DQ9BY66 1539 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 PLXNC1O60486 1568 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 IARSP41252 1262 aaKnown RBP18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 MFSD6Q6ZSS7 791 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 LDHCP07864 332 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 PPFIBP1Q86W92 1011 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 DDX17Q92841 729 aaKnown RBP18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 NLRP3Q96P20 1036 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 MCM5P33992 734 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 LRRC2Q9BYS8 371 aa18.22■□□□□ 0.51
CARMIL3-201ENST00000342740 PREX2Q70Z35 1606 aa18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 SSRP1Q08945 709 aaKnown RBP18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 NMIQ13287 307 aaPredicted RBP18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 RAB11FIP4Q86YS3 637 aa18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 PLA2R1Q13018 1463 aa18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 CATIPQ7Z7H3 387 aa18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 DHX8Q14562 1220 aaKnown RBP18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 SLC9C2Q5TAH2 1124 aa18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 SLF2Q8IX21 1173 aa18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 OTUD7AQ8TE49 926 aaPredicted RBP18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 BMP2KQ9NSY1 1161 aaPredicted RBP18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 ARGLU1Q9NWB6 273 aaPredicted RBP18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 SEC63Q9UGP8 760 aaKnown RBP18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 CFAP74Q9C0B2 1584 aa18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 USP19O94966 1318 aa18.21■□□□□ 0.51
CARMIL3-201ENST00000342740 CHMLP26374 656 aa18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 TFCP2Q12800 502 aa18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 PAG1Q9NWQ8 432 aa18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 KDM2BQ8NHM5 1336 aa18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 UTP14AQ9BVJ6 771 aaKnown RBP18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 IRS4O14654 1257 aaPredicted RBP18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 CCP110O43303 1012 aa18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 SMTNL1A8MU46 457 aa18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 CBFA2T2O43439 604 aa18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
CARMIL3-201ENST00000342740 CKAP2LQ8IYA6 745 aa18.19■□□□□ 0.5
CARMIL3-201ENST00000342740 BAG3O95817 575 aa18.19■□□□□ 0.5
CARMIL3-201ENST00000342740 ZNHIT6Q9NWK9 470 aaKnown RBP18.19■□□□□ 0.5
CARMIL3-201ENST00000342740 METAP2P50579 478 aaKnown RBP eCLIP18.19■□□□□ 0.5
CARMIL3-201ENST00000342740 SLC52A2Q9HAB3 445 aa18.19■□□□□ 0.5
CARMIL3-201ENST00000342740 CT47A1Q5JQC4 288 aaPredicted RBP18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 MYOM2P54296 1465 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 KDM5AP29375 1690 aaKnown RBP18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 HELBQ8NG08 1087 aaPredicted RBP18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 METTL22Q9BUU2 404 aaPredicted RBP18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 ANO10Q9NW15 660 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 CHD1O14646 1710 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 KDM5CP41229 1560 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 KLF18A0A0U1RQI7 1052 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 SPTY2D1Q68D10 685 aaPredicted RBP18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 ZCCHC11Q5TAX3 1644 aaKnown RBP18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 ARHGEF10O15013 1369 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 ERCC6L2Q5T890 1561 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 TSPY2A6NKD2 308 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 KLHL40Q2TBA0 621 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
CARMIL3-201ENST00000342740 CYP7A1P22680 504 aa18.17■□□□□ 0.5
CARMIL3-201ENST00000342740 SLAIN2Q9P270 581 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms