RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 NTSR2O95665 410 aa25.37■■□□□ 1.65
ITGA4-202ENST00000339307 IARSP41252 1262 aaKnown RBP25.37■■□□□ 1.65
ITGA4-202ENST00000339307 XAGE3Q8WTP9 111 aa25.37■■□□□ 1.65
ITGA4-202ENST00000339307 UTP14AQ9BVJ6 771 aaKnown RBP25.37■■□□□ 1.65
ITGA4-202ENST00000339307 IQCA1LA6NCM1 817 aa25.37■■□□□ 1.65
ITGA4-202ENST00000339307 NLRP3Q96P20 1036 aa25.37■■□□□ 1.65
ITGA4-202ENST00000339307 TRIM35Q9UPQ4 493 aa25.37■■□□□ 1.65
ITGA4-202ENST00000339307 IBTKQ9P2D0 1353 aaPredicted RBP25.36■■□□□ 1.65
ITGA4-202ENST00000339307 CHL1O00533 1208 aa25.36■■□□□ 1.65
ITGA4-202ENST00000339307 IFFO2Q5TF58 517 aa25.36■■□□□ 1.65
ITGA4-202ENST00000339307 CHADLQ6NUI6 762 aa25.36■■□□□ 1.65
ITGA4-202ENST00000339307 LRP10Q7Z4F1 713 aa25.36■■□□□ 1.65
ITGA4-202ENST00000339307 JDP2Q8WYK2 163 aa25.36■■□□□ 1.65
ITGA4-202ENST00000339307 TMX4Q9H1E5 349 aaPredicted RBP25.36■■□□□ 1.65
ITGA4-202ENST00000339307 ZNF541Q9H0D2 1346 aa25.36■■□□□ 1.65
ITGA4-202ENST00000339307 POTEIP0CG38 1075 aa25.35■■□□□ 1.65
ITGA4-202ENST00000339307 POTEJP0CG39 1038 aa25.35■■□□□ 1.65
ITGA4-202ENST00000339307 PPEF1O14829 653 aaPredicted RBP25.34■■□□□ 1.65
ITGA4-202ENST00000339307 HOXA10P31260 410 aaPredicted RBP25.34■■□□□ 1.65
ITGA4-202ENST00000339307 EAPPQ56P03 285 aaPredicted RBP25.34■■□□□ 1.65
ITGA4-202ENST00000339307 HSP90AB3PQ58FF7 597 aa25.34■■□□□ 1.65
ITGA4-202ENST00000339307 CC2D2BQ6DHV5 1058 aa25.34■■□□□ 1.65
ITGA4-202ENST00000339307 C3orf67Q6ZVT6 689 aa25.34■■□□□ 1.65
ITGA4-202ENST00000339307 PRKRIP1Q9H875 184 aaPredicted RBP25.34■■□□□ 1.65
ITGA4-202ENST00000339307 ZNF428Q96B54 188 aa25.33■■□□□ 1.65
ITGA4-202ENST00000339307 CRAMP1Q96RY5 1269 aa25.33■■□□□ 1.65
ITGA4-202ENST00000339307 DDX21Q9NR30 783 aaKnown RBP eCLIP25.33■■□□□ 1.65
ITGA4-202ENST00000339307 HDGFL1Q5TGJ6 251 aa25.32■■□□□ 1.64
ITGA4-202ENST00000339307 PSMD1Q99460 953 aa25.32■■□□□ 1.64
ITGA4-202ENST00000339307 CHPF2Q9P2E5 772 aa25.32■■□□□ 1.64
ITGA4-202ENST00000339307 CLEC11AQ9Y240 323 aa25.32■■□□□ 1.64
ITGA4-202ENST00000339307 TAF1DQ9H5J8 278 aaPredicted RBP25.31■■□□□ 1.64
ITGA4-202ENST00000339307 HACL1Q9UJ83 578 aa25.31■■□□□ 1.64
ITGA4-202ENST00000339307 RIC1Q4ADV7 1423 aa25.31■■□□□ 1.64
ITGA4-202ENST00000339307 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
ITGA4-202ENST00000339307 EIF6P56537 245 aaKnown RBP25.3■■□□□ 1.64
ITGA4-202ENST00000339307 L3MBTL3Q96JM7 780 aaPredicted RBP25.3■■□□□ 1.64
ITGA4-202ENST00000339307 TRMT112Q9UI30 125 aaKnown RBP25.3■■□□□ 1.64
ITGA4-202ENST00000339307 GJA3Q9Y6H8 435 aa25.3■■□□□ 1.64
ITGA4-202ENST00000339307 NLRP10Q86W26 655 aa25.29■■□□□ 1.64
ITGA4-202ENST00000339307 LARGE2Q8N3Y3 721 aa25.29■■□□□ 1.64
ITGA4-202ENST00000339307 JMYQ8N9B5 988 aa25.29■■□□□ 1.64
ITGA4-202ENST00000339307 RNF123Q5XPI4 1314 aa25.29■■□□□ 1.64
ITGA4-202ENST00000339307 FZD9O00144 591 aa25.29■■□□□ 1.64
ITGA4-202ENST00000339307 HCLS1P14317 486 aaPredicted RBP25.29■■□□□ 1.64
ITGA4-202ENST00000339307 TCIRG1Q13488 830 aa25.29■■□□□ 1.64
ITGA4-202ENST00000339307 GRIPAP1Q4V328 841 aa25.29■■□□□ 1.64
ITGA4-202ENST00000339307 SLC51AQ86UW1 340 aa25.29■■□□□ 1.64
ITGA4-202ENST00000339307 LDHDQ86WU2 507 aa25.29■■□□□ 1.64
ITGA4-202ENST00000339307 EPHX2P34913 555 aa25.28■■□□□ 1.64
ITGA4-202ENST00000339307 SLC10A5Q5PT55 438 aa25.28■■□□□ 1.64
ITGA4-202ENST00000339307 CFAP44Q96MT7 982 aa25.28■■□□□ 1.64
ITGA4-202ENST00000339307 SCN4AP35499 1836 aa25.26■■□□□ 1.63
ITGA4-202ENST00000339307 APAF1O14727 1248 aa25.26■■□□□ 1.63
ITGA4-202ENST00000339307 DUSP27Q5VZP5 1158 aa25.26■■□□□ 1.63
ITGA4-202ENST00000339307 GPC2Q8N158 579 aa25.26■■□□□ 1.63
ITGA4-202ENST00000339307 DBF4Q9UBU7 674 aaPredicted RBP25.26■■□□□ 1.63
ITGA4-202ENST00000339307 MBIPQ9NS73 344 aa25.25■■□□□ 1.63
ITGA4-202ENST00000339307 ATP6V0A2Q9Y487 856 aa25.25■■□□□ 1.63
ITGA4-202ENST00000339307 ABCC4O15439 1325 aa25.24■■□□□ 1.63
ITGA4-202ENST00000339307 SH3TC1Q8TE82 1336 aa25.24■■□□□ 1.63
ITGA4-202ENST00000339307 PPIP5K2O43314 1243 aa25.24■■□□□ 1.63
ITGA4-202ENST00000339307 HOXB7P09629 217 aa25.24■■□□□ 1.63
ITGA4-202ENST00000339307 ANKRD13DQ6ZTN6 518 aa25.24■■□□□ 1.63
ITGA4-202ENST00000339307 DDX46Q7L014 1031 aaKnown RBP25.24■■□□□ 1.63
ITGA4-202ENST00000339307 NIM1KQ8IY84 436 aa25.24■■□□□ 1.63
ITGA4-202ENST00000339307 PLBD2Q8NHP8 589 aa25.24■■□□□ 1.63
ITGA4-202ENST00000339307 MKRN1Q9UHC7 482 aaKnown RBP25.24■■□□□ 1.63
ITGA4-202ENST00000339307 ANKRD36CQ5JPF3 1778 aa25.23■■□□□ 1.63
ITGA4-202ENST00000339307 LMOD1P29536 600 aaPredicted RBP25.23■■□□□ 1.63
ITGA4-202ENST00000339307 PNMA8AQ86V59 439 aaPredicted RBP25.23■■□□□ 1.63
ITGA4-202ENST00000339307 CREBZFQ9NS37 354 aa25.23■■□□□ 1.63
ITGA4-202ENST00000339307 SNED1Q8TER0 1413 aa25.23■■□□□ 1.63
ITGA4-202ENST00000339307 ATP5J2-PTCD1G3V325 749 aa25.22■■□□□ 1.63
ITGA4-202ENST00000339307 ELL2O00472 640 aaPredicted RBP25.22■■□□□ 1.63
ITGA4-202ENST00000339307 AOC3Q16853 763 aa25.22■■□□□ 1.63
ITGA4-202ENST00000339307 HYPKQ9NX55 129 aa25.22■■□□□ 1.63
ITGA4-202ENST00000339307 BBOX1O75936 387 aa25.21■■□□□ 1.63
ITGA4-202ENST00000339307 CALD1Q05682 793 aaKnown RBP25.2■■□□□ 1.63
ITGA4-202ENST00000339307 RTL5Q5HYW3 569 aaPredicted RBP25.2■■□□□ 1.63
ITGA4-202ENST00000339307 DPP8Q6V1X1 898 aaPredicted RBP25.2■■□□□ 1.63
ITGA4-202ENST00000339307 GNAI1P63096 354 aa25.2■■□□□ 1.62
ITGA4-202ENST00000339307 SUPT20HQ8NEM7 779 aa25.2■■□□□ 1.62
ITGA4-202ENST00000339307 FAM89AQ96GI7 184 aa25.2■■□□□ 1.62
ITGA4-202ENST00000339307 MAP1SQ66K74 1059 aaPredicted RBP25.19■■□□□ 1.62
ITGA4-202ENST00000339307 SP8Q8IXZ3 490 aa25.19■■□□□ 1.62
ITGA4-202ENST00000339307 MPNDQ8N594 471 aa25.19■■□□□ 1.62
ITGA4-202ENST00000339307 IFT57Q9NWB7 429 aa25.19■■□□□ 1.62
ITGA4-202ENST00000339307 COL4A5P29400 1685 aa25.19■■□□□ 1.62
ITGA4-202ENST00000339307 GRAPQ13588 217 aa25.18■■□□□ 1.62
ITGA4-202ENST00000339307 RIC3Q7Z5B4 369 aa25.18■■□□□ 1.62
ITGA4-202ENST00000339307 GRAPLQ8TC17 118 aaPredicted RBP25.18■■□□□ 1.62
ITGA4-202ENST00000339307 HSPA1AP0DMV8 641 aaKnown RBP25.17■■□□□ 1.62
ITGA4-202ENST00000339307 HSPA1BP0DMV9 641 aaKnown RBP25.17■■□□□ 1.62
ITGA4-202ENST00000339307 GOLGA2Q08379 1002 aa25.17■■□□□ 1.62
ITGA4-202ENST00000339307 CNTROBQ8N137 903 aa25.17■■□□□ 1.62
ITGA4-202ENST00000339307 PASKQ96RG2 1323 aa25.16■■□□□ 1.62
ITGA4-202ENST00000339307 LAMB2P55268 1798 aa25.16■■□□□ 1.62
ITGA4-202ENST00000339307 TMEM88BA6NKF7 163 aa25.15■■□□□ 1.62
ITGA4-202ENST00000339307 ITGBL1O95965 494 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms