RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 ZBTB46Q86UZ6 589 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 TMCO5AQ8N6Q1 288 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 RNF214Q8ND24 703 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 SLAMF7Q9NQ25 335 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 RB1CC1Q8TDY2 1594 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 CCDC189A1A4V9 331 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 IPO8O15397 1037 aaKnown RBP3.75□□□□□ -1.81
SOCS4-201ENST00000339298 EVI5O60447 810 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 ZNF853P0CG23 659 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 CPEP16870 476 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 PIP4K2BP78356 416 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 CBX1P83916 185 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 PPP4R3BQ5MIZ7 849 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 ZNF662Q6ZS27 426 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 RELL1Q8IUW5 271 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 TIGD1Q96MW7 591 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 USP17L3A6NCW0 530 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 USP17L4A6NCW7 530 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 A6NJR5 290 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 PRC1O43663 620 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 TIPRLO75663 272 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 USP17L2Q6R6M4 530 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 GK5Q6ZS86 529 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 USP17L1Q7RTZ2 530 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 CCDC144CPQ8IYA2 1237 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 SPATA17Q96L03 361 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 CALCOCO1Q9P1Z2 691 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 RCAN3Q9UKA8 241 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 MEIS1O00470 390 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 CREB3O43889 395 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 SMC2O95347 1197 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 DSG2Q14126 1118 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 MYSM1Q5VVJ2 828 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 DRC7Q8IY82 874 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 CTNNBL1Q8WYA6 563 aaPredicted RBP3.75□□□□□ -1.81
SOCS4-201ENST00000339298 TRIM6Q9C030 488 aaPredicted RBP3.75□□□□□ -1.81
SOCS4-201ENST00000339298 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.75□□□□□ -1.81
SOCS4-201ENST00000339298 LIMD1Q9UGP4 676 aa3.75□□□□□ -1.81
SOCS4-201ENST00000339298 CDC45O75419 566 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 OATP04181 439 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 FERP16591 822 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 ATP1A2P50993 1020 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 KIF22Q14807 665 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 SKIDA1Q1XH10 827 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 LONRF3Q496Y0 759 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 CIAPIN1Q6FI81 312 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 UBE2Q1Q7Z7E8 422 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 ERC1Q8IUD2 1116 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 GTF3C2Q8WUA4 911 aaPredicted RBP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 CACTINQ8WUQ7 758 aaKnown RBP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 IP6K2Q9UHH9 426 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 COL4A3BPQ9Y5P4 624 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 USP17L5A8MUK1 530 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 TMPRSS15P98073 1019 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 PICALMQ13492 652 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 ARHGAP27Q6ZUM4 889 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 FAM114A1Q8IWE2 563 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 RPGRQ92834 1020 aaKnown RBP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 RAB6BQ9NRW1 208 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 PLSCR2Q9NRY7 297 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 FANCLQ9NW38 375 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 NBPF26B4DH59 902 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 H0YC42 278 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 K7ELQ4 463 aaPredicted RBP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 NEBLO76041 1014 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 FXR2P51116 673 aaKnown RBP eCLIP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 MLLT1Q03111 559 aaPredicted RBP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 CCDC40Q4G0X9 1142 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 TCERG1LQ5VWI1 586 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 IQCA1Q86XH1 822 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 ERCC4Q92889 916 aaPredicted RBP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 HOMER2Q9NSB8 354 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 NDC80O14777 642 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 ZKSCAN1P17029 563 aaPredicted RBP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 PSMD6Q15008 389 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 SYCP2LQ5T4T6 812 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 TMEM164Q5U3C3 297 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 USP7Q93009 1102 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 CHMP4CQ96CF2 233 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 SPACA7Q96KW9 195 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 SPATA32Q96LK8 384 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 BACH2Q9BYV9 841 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 SEPT3Q9UH03 358 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 HCN4Q9Y3Q4 1203 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 PARP3Q9Y6F1 533 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 GOLGA6L7A0A1B0GV03 622 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 SHTN1A0MZ66 631 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 SMTNL1A8MU46 457 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 DESP17661 470 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 POLR2FP61218 127 aaKnown RBP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 RABL2AQ9UBK7 228 aaPredicted RBP3.74□□□□□ -1.81
SOCS4-201ENST00000339298 KNSTRNQ9Y448 316 aa3.74□□□□□ -1.81
SOCS4-201ENST00000339298 SPDYE16A6NNV3 312 aaPredicted RBP3.73□□□□□ -1.81
SOCS4-201ENST00000339298 STMND1H3BQB6 276 aa3.73□□□□□ -1.81
SOCS4-201ENST00000339298 AP3D1O14617 1153 aa3.73□□□□□ -1.81
SOCS4-201ENST00000339298 MYBL2P10244 700 aa3.73□□□□□ -1.81
SOCS4-201ENST00000339298 RFC1P35251 1148 aaPredicted RBP3.73□□□□□ -1.81
SOCS4-201ENST00000339298 NFKB2Q00653 900 aa3.73□□□□□ -1.81
SOCS4-201ENST00000339298 RABEP1Q15276 862 aa3.73□□□□□ -1.81
SOCS4-201ENST00000339298 TRIM68Q6AZZ1 485 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms