RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 N4BP2Q86UW6 1770 aaPredicted RBP21.29■■□□□ 1
SFN-201ENST00000339276 KIF16BQ96L93 1317 aa21.29■■□□□ 1
SFN-201ENST00000339276 PXDNLA1KZ92 1463 aa21.29■■□□□ 1
SFN-201ENST00000339276 TRIM28Q13263 835 aaKnown RBP21.29■■□□□ 1
SFN-201ENST00000339276 CWF19L2Q2TBE0 894 aaKnown RBP21.29■■□□□ 1
SFN-201ENST00000339276 ERFEQ4G0M1 354 aa21.29■■□□□ 1
SFN-201ENST00000339276 UTP14AQ9BVJ6 771 aaKnown RBP21.29■■□□□ 1
SFN-201ENST00000339276 GTF2E1P29083 439 aaPredicted RBP21.28■■□□□ 1
SFN-201ENST00000339276 NEURL1BA8MQ27 555 aa21.27■□□□□ 0.99
SFN-201ENST00000339276 COL11A2P13942 1736 aaPredicted RBP21.27■□□□□ 0.99
SFN-201ENST00000339276 SLC4A10Q6U841 1118 aa21.27■□□□□ 0.99
SFN-201ENST00000339276 CCDC191Q8NCU4 936 aa21.27■□□□□ 0.99
SFN-201ENST00000339276 CWC25Q9NXE8 425 aaPredicted RBP21.27■□□□□ 0.99
SFN-201ENST00000339276 TRMT112Q9UI30 125 aaKnown RBP21.27■□□□□ 0.99
SFN-201ENST00000339276 BEND3Q5T5X7 828 aa21.26■□□□□ 0.99
SFN-201ENST00000339276 SYNE4Q8N205 404 aa21.26■□□□□ 0.99
SFN-201ENST00000339276 LINS1Q8NG48 757 aa21.26■□□□□ 0.99
SFN-201ENST00000339276 BRIP1Q9BX63 1249 aa21.26■□□□□ 0.99
SFN-201ENST00000339276 RNF123Q5XPI4 1314 aa21.25■□□□□ 0.99
SFN-201ENST00000339276 FRAT1Q92837 279 aaPredicted RBP21.25■□□□□ 0.99
SFN-201ENST00000339276 RCAN3Q9UKA8 241 aa21.25■□□□□ 0.99
SFN-201ENST00000339276 DDX60Q8IY21 1712 aaKnown RBP21.24■□□□□ 0.99
SFN-201ENST00000339276 SH3TC1Q8TE82 1336 aa21.24■□□□□ 0.99
SFN-201ENST00000339276 DLEC1Q9Y238 1755 aa21.24■□□□□ 0.99
SFN-201ENST00000339276 RIC1Q4ADV7 1423 aa21.24■□□□□ 0.99
SFN-201ENST00000339276 A0A0G2JLW4 131 aa21.24■□□□□ 0.99
SFN-201ENST00000339276 DPEP1P16444 411 aa21.24■□□□□ 0.99
SFN-201ENST00000339276 CHRNA5P30532 468 aa21.24■□□□□ 0.99
SFN-201ENST00000339276 TGFB2P61812 414 aa21.24■□□□□ 0.99
SFN-201ENST00000339276 RTL5Q5HYW3 569 aaPredicted RBP21.24■□□□□ 0.99
SFN-201ENST00000339276 FAM89AQ96GI7 184 aa21.24■□□□□ 0.99
SFN-201ENST00000339276 API5Q9BZZ5 524 aaKnown RBP21.24■□□□□ 0.99
SFN-201ENST00000339276 LAMB2P55268 1798 aa21.23■□□□□ 0.99
SFN-201ENST00000339276 GCKRQ14397 625 aa21.23■□□□□ 0.99
SFN-201ENST00000339276 ZBTB38Q8NAP3 1195 aaPredicted RBP21.23■□□□□ 0.99
SFN-201ENST00000339276 JARID2Q92833 1246 aaPredicted RBP21.23■□□□□ 0.99
SFN-201ENST00000339276 TNNQ9UQP3 1299 aa21.23■□□□□ 0.99
SFN-201ENST00000339276 BRCA1P38398 1863 aaKnown RBP21.22■□□□□ 0.99
SFN-201ENST00000339276 PDE6BP35913 854 aa21.22■□□□□ 0.99
SFN-201ENST00000339276 ARHGAP45Q92619 1136 aa21.22■□□□□ 0.99
SFN-201ENST00000339276 SRCIN1Q9C0H9 1055 aa21.22■□□□□ 0.99
SFN-201ENST00000339276 PCCAP05165 728 aaPredicted RBP21.21■□□□□ 0.99
SFN-201ENST00000339276 HCLS1P14317 486 aaPredicted RBP21.21■□□□□ 0.99
SFN-201ENST00000339276 TRIM27P14373 513 aa21.21■□□□□ 0.99
SFN-201ENST00000339276 C3orf67Q6ZVT6 689 aa21.21■□□□□ 0.99
SFN-201ENST00000339276 C2CD5Q86YS7 1000 aa21.21■□□□□ 0.99
SFN-201ENST00000339276 WWC3Q9ULE0 1092 aa21.21■□□□□ 0.99
SFN-201ENST00000339276 IPO8O15397 1037 aaKnown RBP21.2■□□□□ 0.98
SFN-201ENST00000339276 KCNA3P22001 575 aa21.2■□□□□ 0.98
SFN-201ENST00000339276 SLC10A5Q5PT55 438 aa21.2■□□□□ 0.98
SFN-201ENST00000339276 ATF7IPQ6VMQ6 1270 aa21.2■□□□□ 0.98
SFN-201ENST00000339276 ABCC4O15439 1325 aa21.2■□□□□ 0.98
SFN-201ENST00000339276 KLRG2A4D1S0 409 aaPredicted RBP21.19■□□□□ 0.98
SFN-201ENST00000339276 H0YIN7 160 aa21.19■□□□□ 0.98
SFN-201ENST00000339276 ALDH1L1O75891 902 aa21.19■□□□□ 0.98
SFN-201ENST00000339276 ZKSCAN2Q63HK3 967 aa21.19■□□□□ 0.98
SFN-201ENST00000339276 IRS4O14654 1257 aaPredicted RBP21.18■□□□□ 0.98
SFN-201ENST00000339276 UBE3BQ7Z3V4 1068 aa21.18■□□□□ 0.98
SFN-201ENST00000339276 CLUAP1Q96AJ1 413 aa21.18■□□□□ 0.98
SFN-201ENST00000339276 H7C1W4 665 aa21.17■□□□□ 0.98
SFN-201ENST00000339276 SRGNP10124 158 aa21.17■□□□□ 0.98
SFN-201ENST00000339276 CDHR2Q9BYE9 1310 aa21.17■□□□□ 0.98
SFN-201ENST00000339276 CACNA1SQ13698 1873 aa21.16■□□□□ 0.98
SFN-201ENST00000339276 CASP7P55210 303 aa21.16■□□□□ 0.98
SFN-201ENST00000339276 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
SFN-201ENST00000339276 NLRP3Q96P20 1036 aa21.16■□□□□ 0.98
SFN-201ENST00000339276 PDZRN3Q9UPQ7 1066 aa21.16■□□□□ 0.98
SFN-201ENST00000339276 GRM8O00222 908 aa21.15■□□□□ 0.98
SFN-201ENST00000339276 CCT4P50991 539 aaKnown RBP21.15■□□□□ 0.98
SFN-201ENST00000339276 ZNF622Q969S3 477 aaKnown RBP eCLIP21.15■□□□□ 0.98
SFN-201ENST00000339276 MASTLQ96GX5 879 aa21.14■□□□□ 0.97
SFN-201ENST00000339276 C9orf78Q9NZ63 289 aaPredicted RBP21.14■□□□□ 0.97
SFN-201ENST00000339276 PIM2Q9P1W9 311 aa21.14■□□□□ 0.97
SFN-201ENST00000339276 MYH3P11055 1940 aa21.14■□□□□ 0.97
SFN-201ENST00000339276 PLIN1O60240 522 aa21.13■□□□□ 0.97
SFN-201ENST00000339276 NPR1P16066 1061 aa21.13■□□□□ 0.97
SFN-201ENST00000339276 INTS3Q68E01 1043 aaKnown RBP21.13■□□□□ 0.97
SFN-201ENST00000339276 STYK1Q6J9G0 422 aa21.13■□□□□ 0.97
SFN-201ENST00000339276 PELP1Q8IZL8 1130 aaKnown RBP21.13■□□□□ 0.97
SFN-201ENST00000339276 RPGRQ92834 1020 aaKnown RBP21.13■□□□□ 0.97
SFN-201ENST00000339276 PDE8AO60658 829 aa21.12■□□□□ 0.97
SFN-201ENST00000339276 NBPF7P0C2Y1 421 aaPredicted RBP21.12■□□□□ 0.97
SFN-201ENST00000339276 RLBP1P12271 317 aa21.12■□□□□ 0.97
SFN-201ENST00000339276 BCS1LQ9Y276 419 aa21.12■□□□□ 0.97
SFN-201ENST00000339276 GOLGB1Q14789 3259 aaKnown RBP21.12■□□□□ 0.97
SFN-201ENST00000339276 HSP90B1P14625 803 aaKnown RBP21.11■□□□□ 0.97
SFN-201ENST00000339276 YBX3P16989 372 aaKnown RBP eCLIP21.11■□□□□ 0.97
SFN-201ENST00000339276 SF3B3Q15393 1217 aaKnown RBP21.11■□□□□ 0.97
SFN-201ENST00000339276 FTSJ3Q8IY81 847 aaKnown RBP21.11■□□□□ 0.97
SFN-201ENST00000339276 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
SFN-201ENST00000339276 TMEM57Q8N5G2 664 aa21.11■□□□□ 0.97
SFN-201ENST00000339276 USP44Q9H0E7 712 aa21.11■□□□□ 0.97
SFN-201ENST00000339276 UTYO14607 1347 aa21.11■□□□□ 0.97
SFN-201ENST00000339276 SLX4Q8IY92 1834 aa21.11■□□□□ 0.97
SFN-201ENST00000339276 TAF1P21675 1872 aa21.1■□□□□ 0.97
SFN-201ENST00000339276 HOXA10P31260 410 aaPredicted RBP21.1■□□□□ 0.97
SFN-201ENST00000339276 DALRD3Q5D0E6 543 aaKnown RBP21.1■□□□□ 0.97
SFN-201ENST00000339276 TTLL6Q8N841 843 aa21.1■□□□□ 0.97
SFN-201ENST00000339276 ARFGEF1Q9Y6D6 1849 aa21.1■□□□□ 0.97
SFN-201ENST00000339276 COL4A1P02462 1669 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms