RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 IARSP41252 1262 aaKnown RBP20.65■□□□□ 0.9
LINC01116-202ENST00000339037 EAPPQ56P03 285 aaPredicted RBP20.65■□□□□ 0.9
LINC01116-202ENST00000339037 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
LINC01116-202ENST00000339037 HACL1Q9UJ83 578 aa20.65■□□□□ 0.9
LINC01116-202ENST00000339037 PASKQ96RG2 1323 aa20.64■□□□□ 0.89
LINC01116-202ENST00000339037 MAPK8IP3Q9UPT6 1336 aa20.64■□□□□ 0.89
LINC01116-202ENST00000339037 MYL6BP14649 208 aa20.64■□□□□ 0.89
LINC01116-202ENST00000339037 TTLL7Q6ZT98 887 aa20.64■□□□□ 0.89
LINC01116-202ENST00000339037 SYNE4Q8N205 404 aa20.64■□□□□ 0.89
LINC01116-202ENST00000339037 RPGRQ92834 1020 aaKnown RBP20.64■□□□□ 0.89
LINC01116-202ENST00000339037 PSMD1Q99460 953 aa20.64■□□□□ 0.89
LINC01116-202ENST00000339037 IBTKQ9P2D0 1353 aaPredicted RBP20.63■□□□□ 0.89
LINC01116-202ENST00000339037 FZD9O00144 591 aa20.63■□□□□ 0.89
LINC01116-202ENST00000339037 ABCB7O75027 752 aa20.63■□□□□ 0.89
LINC01116-202ENST00000339037 GPTP24298 496 aa20.63■□□□□ 0.89
LINC01116-202ENST00000339037 ZBTB3Q9H5J0 574 aa20.63■□□□□ 0.89
LINC01116-202ENST00000339037 RIC1Q4ADV7 1423 aa20.62■□□□□ 0.89
LINC01116-202ENST00000339037 SNED1Q8TER0 1413 aa20.62■□□□□ 0.89
LINC01116-202ENST00000339037 RNF123Q5XPI4 1314 aa20.62■□□□□ 0.89
LINC01116-202ENST00000339037 UBN2Q6ZU65 1347 aa20.62■□□□□ 0.89
LINC01116-202ENST00000339037 EPHX2P34913 555 aa20.62■□□□□ 0.89
LINC01116-202ENST00000339037 CC2D2BQ6DHV5 1058 aa20.62■□□□□ 0.89
LINC01116-202ENST00000339037 JDP2Q8WYK2 163 aa20.62■□□□□ 0.89
LINC01116-202ENST00000339037 PNNQ9H307 717 aaKnown RBP20.62■□□□□ 0.89
LINC01116-202ENST00000339037 CNTNAP1P78357 1384 aa20.61■□□□□ 0.89
LINC01116-202ENST00000339037 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
LINC01116-202ENST00000339037 PNMA8AQ86V59 439 aaPredicted RBP20.61■□□□□ 0.89
LINC01116-202ENST00000339037 GPC2Q8N158 579 aa20.61■□□□□ 0.89
LINC01116-202ENST00000339037 CLEC11AQ9Y240 323 aa20.61■□□□□ 0.89
LINC01116-202ENST00000339037 NUP98P52948 1817 aa20.6■□□□□ 0.89
LINC01116-202ENST00000339037 ERBB4Q15303 1308 aa20.6■□□□□ 0.89
LINC01116-202ENST00000339037 TMEM88BA6NKF7 163 aa20.6■□□□□ 0.89
LINC01116-202ENST00000339037 ITGBL1O95965 494 aaPredicted RBP20.6■□□□□ 0.89
LINC01116-202ENST00000339037 SUSD4Q5VX71 490 aa20.59■□□□□ 0.89
LINC01116-202ENST00000339037 GRIPAP1Q4V328 841 aa20.58■□□□□ 0.89
LINC01116-202ENST00000339037 GIGYF2Q6Y7W6 1299 aaKnown RBP20.58■□□□□ 0.89
LINC01116-202ENST00000339037 ZNF34Q8IZ26 560 aa20.58■□□□□ 0.89
LINC01116-202ENST00000339037 TSPYL4Q9UJ04 414 aa20.58■□□□□ 0.89
LINC01116-202ENST00000339037 NTSR2O95665 410 aa20.57■□□□□ 0.88
LINC01116-202ENST00000339037 EIF6P56537 245 aaKnown RBP20.57■□□□□ 0.88
LINC01116-202ENST00000339037 ADAMTSL1Q8N6G6 1762 aa20.57■□□□□ 0.88
LINC01116-202ENST00000339037 PPEF1O14829 653 aaPredicted RBP20.56■□□□□ 0.88
LINC01116-202ENST00000339037 PARP10Q53GL7 1025 aa20.56■□□□□ 0.88
LINC01116-202ENST00000339037 MAP1SQ66K74 1059 aaPredicted RBP20.56■□□□□ 0.88
LINC01116-202ENST00000339037 PPP1R42Q7Z4L9 355 aa20.56■□□□□ 0.88
LINC01116-202ENST00000339037 RBM17Q96I25 401 aaKnown RBP20.56■□□□□ 0.88
LINC01116-202ENST00000339037 CRAMP1Q96RY5 1269 aa20.56■□□□□ 0.88
LINC01116-202ENST00000339037 GJA3Q9Y6H8 435 aa20.56■□□□□ 0.88
LINC01116-202ENST00000339037 COL4A5P29400 1685 aa20.55■□□□□ 0.88
LINC01116-202ENST00000339037 CNTROBQ8N137 903 aa20.55■□□□□ 0.88
LINC01116-202ENST00000339037 LARGE2Q8N3Y3 721 aa20.55■□□□□ 0.88
LINC01116-202ENST00000339037 TCERG1O14776 1098 aaKnown RBP20.54■□□□□ 0.88
LINC01116-202ENST00000339037 LMOD1P29536 600 aaPredicted RBP20.54■□□□□ 0.88
LINC01116-202ENST00000339037 VEGFBP49765 207 aa20.54■□□□□ 0.88
LINC01116-202ENST00000339037 C3orf67Q6ZVT6 689 aa20.54■□□□□ 0.88
LINC01116-202ENST00000339037 SPDYE4A6NLX3 237 aa20.53■□□□□ 0.88
LINC01116-202ENST00000339037 FOXN1O15353 648 aa20.53■□□□□ 0.88
LINC01116-202ENST00000339037 EIF2S2P20042 333 aaKnown RBP20.53■□□□□ 0.88
LINC01116-202ENST00000339037 RIPK4P57078 832 aa20.53■□□□□ 0.88
LINC01116-202ENST00000339037 LRP10Q7Z4F1 713 aa20.53■□□□□ 0.88
LINC01116-202ENST00000339037 SLC51AQ86UW1 340 aa20.53■□□□□ 0.88
LINC01116-202ENST00000339037 AIDAQ96BJ3 306 aa20.53■□□□□ 0.88
LINC01116-202ENST00000339037 NLRP3Q96P20 1036 aa20.53■□□□□ 0.88
LINC01116-202ENST00000339037 TMX4Q9H1E5 349 aaPredicted RBP20.53■□□□□ 0.88
LINC01116-202ENST00000339037 PDIA6Q15084 440 aa20.52■□□□□ 0.88
LINC01116-202ENST00000339037 UTP14AQ9BVJ6 771 aaKnown RBP20.52■□□□□ 0.88
LINC01116-202ENST00000339037 SCNN1DP51172 638 aa20.51■□□□□ 0.87
LINC01116-202ENST00000339037 LMOD3Q0VAK6 560 aa20.51■□□□□ 0.87
LINC01116-202ENST00000339037 PROSER3Q2NL68 480 aa20.51■□□□□ 0.87
LINC01116-202ENST00000339037 NIM1KQ8IY84 436 aa20.51■□□□□ 0.87
LINC01116-202ENST00000339037 BABAM1Q9NWV8 329 aa20.51■□□□□ 0.87
LINC01116-202ENST00000339037 RASSF10A6NK89 507 aa20.5■□□□□ 0.87
LINC01116-202ENST00000339037 PPIP5K2O43314 1243 aa20.5■□□□□ 0.87
LINC01116-202ENST00000339037 ANXA1P04083 346 aa20.5■□□□□ 0.87
LINC01116-202ENST00000339037 EPS15P42566 896 aa20.49■□□□□ 0.87
LINC01116-202ENST00000339037 DEFB115Q30KQ5 88 aa20.49■□□□□ 0.87
LINC01116-202ENST00000339037 SLC10A5Q5PT55 438 aa20.49■□□□□ 0.87
LINC01116-202ENST00000339037 PRDM10Q9NQV6 1147 aa20.49■□□□□ 0.87
LINC01116-202ENST00000339037 DDX21Q9NR30 783 aaKnown RBP eCLIP20.49■□□□□ 0.87
LINC01116-202ENST00000339037 ABT1Q9ULW3 272 aaKnown RBP20.49■□□□□ 0.87
LINC01116-202ENST00000339037 ATP6V0A2Q9Y487 856 aa20.49■□□□□ 0.87
LINC01116-202ENST00000339037 ABCC4O15439 1325 aa20.49■□□□□ 0.87
LINC01116-202ENST00000339037 LTBP1Q14766 1721 aa20.48■□□□□ 0.87
LINC01116-202ENST00000339037 TMPOP42166 694 aaKnown RBP20.48■□□□□ 0.87
LINC01116-202ENST00000339037 CTCFP49711 727 aaPredicted RBP20.48■□□□□ 0.87
LINC01116-202ENST00000339037 RALBP1Q15311 655 aa20.48■□□□□ 0.87
LINC01116-202ENST00000339037 HSP90AB3PQ58FF7 597 aa20.48■□□□□ 0.87
LINC01116-202ENST00000339037 AOC3Q16853 763 aa20.47■□□□□ 0.87
LINC01116-202ENST00000339037 USP50Q70EL3 339 aaPredicted RBP20.47■□□□□ 0.87
LINC01116-202ENST00000339037 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
LINC01116-202ENST00000339037 NECTIN2Q92692 538 aa20.47■□□□□ 0.87
LINC01116-202ENST00000339037 VPS33BQ9H267 617 aa20.47■□□□□ 0.87
LINC01116-202ENST00000339037 WBP1LQ9NX94 342 aa20.47■□□□□ 0.87
LINC01116-202ENST00000339037 AIMP1Q12904 312 aaKnown RBP20.46■□□□□ 0.87
LINC01116-202ENST00000339037 SUPT20HQ8NEM7 779 aa20.46■□□□□ 0.87
LINC01116-202ENST00000339037 XAGE3Q8WTP9 111 aa20.46■□□□□ 0.87
LINC01116-202ENST00000339037 DSG3P32926 999 aa20.45■□□□□ 0.86
LINC01116-202ENST00000339037 DPP8Q6V1X1 898 aaPredicted RBP20.45■□□□□ 0.86
LINC01116-202ENST00000339037 NLRP10Q86W26 655 aa20.45■□□□□ 0.86
LINC01116-202ENST00000339037 WDR33Q9C0J8 1336 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms