RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 GIGYF2Q6Y7W6 1299 aaKnown RBP18.69■□□□□ 0.58
COMMD4-202ENST00000338995 AIDAQ96BJ3 306 aa18.69■□□□□ 0.58
COMMD4-202ENST00000338995 TSPYL4Q9UJ04 414 aa18.69■□□□□ 0.58
COMMD4-202ENST00000338995 SCN4AP35499 1836 aa18.69■□□□□ 0.58
COMMD4-202ENST00000338995 PASKQ96RG2 1323 aa18.69■□□□□ 0.58
COMMD4-202ENST00000338995 ZNF541Q9H0D2 1346 aa18.69■□□□□ 0.58
COMMD4-202ENST00000338995 CACNA1SQ13698 1873 aa18.69■□□□□ 0.58
COMMD4-202ENST00000338995 ARFGEF2Q9Y6D5 1785 aa18.68■□□□□ 0.58
COMMD4-202ENST00000338995 ITGBL1O95965 494 aaPredicted RBP18.68■□□□□ 0.58
COMMD4-202ENST00000338995 SUSD4Q5VX71 490 aa18.68■□□□□ 0.58
COMMD4-202ENST00000338995 ZNF34Q8IZ26 560 aa18.68■□□□□ 0.58
COMMD4-202ENST00000338995 CNTROBQ8N137 903 aa18.68■□□□□ 0.58
COMMD4-202ENST00000338995 BABAM1Q9NWV8 329 aa18.68■□□□□ 0.58
COMMD4-202ENST00000338995 LMOD3Q0VAK6 560 aa18.67■□□□□ 0.58
COMMD4-202ENST00000338995 LARGE2Q8N3Y3 721 aa18.67■□□□□ 0.58
COMMD4-202ENST00000338995 THUMPD2Q9BTF0 503 aaKnown RBP18.67■□□□□ 0.58
COMMD4-202ENST00000338995 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
COMMD4-202ENST00000338995 CNTNAP1P78357 1384 aa18.67■□□□□ 0.58
COMMD4-202ENST00000338995 IBTKQ9P2D0 1353 aaPredicted RBP18.67■□□□□ 0.58
COMMD4-202ENST00000338995 EIF2S2P20042 333 aaKnown RBP18.66■□□□□ 0.58
COMMD4-202ENST00000338995 RIPK4P57078 832 aa18.66■□□□□ 0.58
COMMD4-202ENST00000338995 UTP14AQ9BVJ6 771 aaKnown RBP18.66■□□□□ 0.58
COMMD4-202ENST00000338995 VPS33BQ9H267 617 aa18.66■□□□□ 0.58
COMMD4-202ENST00000338995 RNF123Q5XPI4 1314 aa18.66■□□□□ 0.58
COMMD4-202ENST00000338995 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
COMMD4-202ENST00000338995 DEFB115Q30KQ5 88 aa18.65■□□□□ 0.58
COMMD4-202ENST00000338995 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
COMMD4-202ENST00000338995 NIM1KQ8IY84 436 aa18.65■□□□□ 0.58
COMMD4-202ENST00000338995 SUPT20HQ8NEM7 779 aa18.65■□□□□ 0.58
COMMD4-202ENST00000338995 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
COMMD4-202ENST00000338995 CTCFP49711 727 aaPredicted RBP18.64■□□□□ 0.57
COMMD4-202ENST00000338995 RALBP1Q15311 655 aa18.64■□□□□ 0.57
COMMD4-202ENST00000338995 SLC10A5Q5PT55 438 aa18.64■□□□□ 0.57
COMMD4-202ENST00000338995 BBOX1O75936 387 aa18.63■□□□□ 0.57
COMMD4-202ENST00000338995 NTSR2O95665 410 aa18.63■□□□□ 0.57
COMMD4-202ENST00000338995 VEGFBP49765 207 aa18.63■□□□□ 0.57
COMMD4-202ENST00000338995 MAP1SQ66K74 1059 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-202ENST00000338995 PRDM10Q9NQV6 1147 aa18.63■□□□□ 0.57
COMMD4-202ENST00000338995 UBN2Q6ZU65 1347 aa18.63■□□□□ 0.57
COMMD4-202ENST00000338995 ABCC12Q96J65 1359 aa18.63■□□□□ 0.57
COMMD4-202ENST00000338995 ABT1Q9ULW3 272 aaKnown RBP18.62■□□□□ 0.57
COMMD4-202ENST00000338995 RIC1Q4ADV7 1423 aa18.62■□□□□ 0.57
COMMD4-202ENST00000338995 NUP98P52948 1817 aa18.61■□□□□ 0.57
COMMD4-202ENST00000338995 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
COMMD4-202ENST00000338995 USP50Q70EL3 339 aaPredicted RBP18.61■□□□□ 0.57
COMMD4-202ENST00000338995 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
COMMD4-202ENST00000338995 FOXN1O15353 648 aa18.6■□□□□ 0.57
COMMD4-202ENST00000338995 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-202ENST00000338995 PCNTO95613 3336 aa18.6■□□□□ 0.57
COMMD4-202ENST00000338995 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
COMMD4-202ENST00000338995 DLG5Q8TDM6 1919 aa18.59■□□□□ 0.57
COMMD4-202ENST00000338995 RASSF10A6NK89 507 aa18.59■□□□□ 0.57
COMMD4-202ENST00000338995 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
COMMD4-202ENST00000338995 PDIA6Q15084 440 aa18.59■□□□□ 0.57
COMMD4-202ENST00000338995 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
COMMD4-202ENST00000338995 DDX21Q9NR30 783 aaKnown RBP eCLIP18.59■□□□□ 0.57
COMMD4-202ENST00000338995 ECE1P42892 770 aa18.58■□□□□ 0.56
COMMD4-202ENST00000338995 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.56
COMMD4-202ENST00000338995 DPP8Q6V1X1 898 aaPredicted RBP18.58■□□□□ 0.56
COMMD4-202ENST00000338995 DDX46Q7L014 1031 aaKnown RBP18.58■□□□□ 0.56
COMMD4-202ENST00000338995 SP8Q8IXZ3 490 aa18.58■□□□□ 0.56
COMMD4-202ENST00000338995 WBP1LQ9NX94 342 aa18.58■□□□□ 0.56
COMMD4-202ENST00000338995 ZNRF3Q9ULT6 936 aa18.58■□□□□ 0.56
COMMD4-202ENST00000338995 KDM3BQ7LBC6 1761 aa18.58■□□□□ 0.56
COMMD4-202ENST00000338995 EPS15P42566 896 aa18.57■□□□□ 0.56
COMMD4-202ENST00000338995 TCIRG1Q13488 830 aa18.57■□□□□ 0.56
COMMD4-202ENST00000338995 MPNDQ8N594 471 aa18.57■□□□□ 0.56
COMMD4-202ENST00000338995 BEGAINQ9BUH8 593 aa18.57■□□□□ 0.56
COMMD4-202ENST00000338995 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
COMMD4-202ENST00000338995 WDR33Q9C0J8 1336 aaKnown RBP18.56■□□□□ 0.56
COMMD4-202ENST00000338995 SCNN1DP51172 638 aa18.56■□□□□ 0.56
COMMD4-202ENST00000338995 TNIP1Q15025 636 aa18.56■□□□□ 0.56
COMMD4-202ENST00000338995 AOC3Q16853 763 aa18.56■□□□□ 0.56
COMMD4-202ENST00000338995 TMC4Q7Z404 712 aa18.56■□□□□ 0.56
COMMD4-202ENST00000338995 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
COMMD4-202ENST00000338995 NECTIN2Q92692 538 aa18.56■□□□□ 0.56
COMMD4-202ENST00000338995 RTFDC1Q9BY42 306 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-202ENST00000338995 ADARB2Q9NS39 739 aaKnown RBP18.56■□□□□ 0.56
COMMD4-202ENST00000338995 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
COMMD4-202ENST00000338995 ANXA1P04083 346 aa18.55■□□□□ 0.56
COMMD4-202ENST00000338995 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
COMMD4-202ENST00000338995 C3orf67Q6ZVT6 689 aa18.55■□□□□ 0.56
COMMD4-202ENST00000338995 PAXIP1Q6ZW49 1069 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-202ENST00000338995 LRP10Q7Z4F1 713 aa18.55■□□□□ 0.56
COMMD4-202ENST00000338995 NLRP10Q86W26 655 aa18.55■□□□□ 0.56
COMMD4-202ENST00000338995 LAS1LQ9Y4W2 734 aaKnown RBP18.55■□□□□ 0.56
COMMD4-202ENST00000338995 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
COMMD4-202ENST00000338995 HCLS1P14317 486 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-202ENST00000338995 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
COMMD4-202ENST00000338995 PROSER3Q2NL68 480 aa18.54■□□□□ 0.56
COMMD4-202ENST00000338995 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
COMMD4-202ENST00000338995 GPRC5DQ9NZD1 345 aa18.54■□□□□ 0.56
COMMD4-202ENST00000338995 ABCC4O15439 1325 aa18.53■□□□□ 0.56
COMMD4-202ENST00000338995 CHL1O00533 1208 aa18.53■□□□□ 0.56
COMMD4-202ENST00000338995 LBX1P52954 281 aa18.53■□□□□ 0.56
COMMD4-202ENST00000338995 CXCL9Q07325 125 aa18.53■□□□□ 0.56
COMMD4-202ENST00000338995 GRAPQ13588 217 aa18.53■□□□□ 0.56
COMMD4-202ENST00000338995 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
COMMD4-202ENST00000338995 GRAPLQ8TC17 118 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-202ENST00000338995 RUNDC1Q96C34 613 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms