RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CC2D2BQ6DHV5 1058 aa15.27■□□□□ 0.03
CSMD2-202ENST00000338325 NUTM1Q86Y26 1132 aa15.27■□□□□ 0.03
CSMD2-202ENST00000338325 THSD7BQ9C0I4 1608 aa15.26■□□□□ 0.03
CSMD2-202ENST00000338325 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
CSMD2-202ENST00000338325 KIF6Q6ZMV9 814 aa15.26■□□□□ 0.03
CSMD2-202ENST00000338325 NGEFQ8N5V2 710 aa15.26■□□□□ 0.03
CSMD2-202ENST00000338325 PNISRQ8TF01 805 aaKnown RBP15.26■□□□□ 0.03
CSMD2-202ENST00000338325 RPGRQ92834 1020 aaKnown RBP15.26■□□□□ 0.03
CSMD2-202ENST00000338325 WBP1LQ9NX94 342 aa15.26■□□□□ 0.03
CSMD2-202ENST00000338325 EIF6P56537 245 aaKnown RBP15.25■□□□□ 0.03
CSMD2-202ENST00000338325 NEFMP07197 916 aa15.24■□□□□ 0.03
CSMD2-202ENST00000338325 LMOD1P29536 600 aaPredicted RBP15.24■□□□□ 0.03
CSMD2-202ENST00000338325 HOXA10P31260 410 aaPredicted RBP15.24■□□□□ 0.03
CSMD2-202ENST00000338325 DEFB115Q30KQ5 88 aa15.24■□□□□ 0.03
CSMD2-202ENST00000338325 GRIPAP1Q4V328 841 aa15.24■□□□□ 0.03
CSMD2-202ENST00000338325 TTLL7Q6ZT98 887 aa15.24■□□□□ 0.03
CSMD2-202ENST00000338325 GJA3Q9Y6H8 435 aa15.24■□□□□ 0.03
CSMD2-202ENST00000338325 UBN2Q6ZU65 1347 aa15.24■□□□□ 0.03
CSMD2-202ENST00000338325 EIF4A1P60842 406 aaKnown RBP15.23■□□□□ 0.03
CSMD2-202ENST00000338325 RRP7AQ9Y3A4 280 aaKnown RBP15.23■□□□□ 0.03
CSMD2-202ENST00000338325 ANKRD36CQ5JPF3 1778 aa15.23■□□□□ 0.03
CSMD2-202ENST00000338325 GPTP24298 496 aa15.22■□□□□ 0.03
CSMD2-202ENST00000338325 LBX1P52954 281 aa15.22■□□□□ 0.03
CSMD2-202ENST00000338325 LARGE2Q8N3Y3 721 aa15.22■□□□□ 0.03
CSMD2-202ENST00000338325 DDX21Q9NR30 783 aaKnown RBP eCLIP15.22■□□□□ 0.03
CSMD2-202ENST00000338325 ABT1Q9ULW3 272 aaKnown RBP15.22■□□□□ 0.03
CSMD2-202ENST00000338325 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
CSMD2-202ENST00000338325 LAMB2P55268 1798 aa15.22■□□□□ 0.03
CSMD2-202ENST00000338325 PPEF1O14829 653 aaPredicted RBP15.22■□□□□ 0.03
CSMD2-202ENST00000338325 MYL6BP14649 208 aa15.22■□□□□ 0.03
CSMD2-202ENST00000338325 SCNN1DP51172 638 aa15.22■□□□□ 0.03
CSMD2-202ENST00000338325 SUSD4Q5VX71 490 aa15.22■□□□□ 0.03
CSMD2-202ENST00000338325 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
CSMD2-202ENST00000338325 CRAMP1Q96RY5 1269 aa15.22■□□□□ 0.03
CSMD2-202ENST00000338325 ZBTB3Q9H5J0 574 aa15.22■□□□□ 0.03
CSMD2-202ENST00000338325 NTSR2O95665 410 aa15.21■□□□□ 0.03
CSMD2-202ENST00000338325 HSPA8P11142 646 aaKnown RBP15.21■□□□□ 0.03
CSMD2-202ENST00000338325 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.03
CSMD2-202ENST00000338325 ZNF34Q8IZ26 560 aa15.21■□□□□ 0.03
CSMD2-202ENST00000338325 EPS15P42566 896 aa15.2■□□□□ 0.02
CSMD2-202ENST00000338325 ERBB4Q15303 1308 aa15.2■□□□□ 0.02
CSMD2-202ENST00000338325 NFE2L2Q16236 605 aa15.19■□□□□ 0.02
CSMD2-202ENST00000338325 GIGYF2Q6Y7W6 1299 aaKnown RBP15.19■□□□□ 0.02
CSMD2-202ENST00000338325 USP50Q70EL3 339 aaPredicted RBP15.19■□□□□ 0.02
CSMD2-202ENST00000338325 PPP1R42Q7Z4L9 355 aa15.19■□□□□ 0.02
CSMD2-202ENST00000338325 SLC51AQ86UW1 340 aa15.19■□□□□ 0.02
CSMD2-202ENST00000338325 NIM1KQ8IY84 436 aa15.19■□□□□ 0.02
CSMD2-202ENST00000338325 PLEKHF1Q96S99 279 aa15.19■□□□□ 0.02
CSMD2-202ENST00000338325 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
CSMD2-202ENST00000338325 PARP10Q53GL7 1025 aa15.18■□□□□ 0.02
CSMD2-202ENST00000338325 C3orf67Q6ZVT6 689 aa15.18■□□□□ 0.02
CSMD2-202ENST00000338325 THUMPD2Q9BTF0 503 aaKnown RBP15.18■□□□□ 0.02
CSMD2-202ENST00000338325 PPIP5K2O43314 1243 aa15.17■□□□□ 0.02
CSMD2-202ENST00000338325 FMR1Q06787 632 aaKnown RBP eCLIP15.17■□□□□ 0.02
CSMD2-202ENST00000338325 PAXIP1Q6ZW49 1069 aaPredicted RBP15.17■□□□□ 0.02
CSMD2-202ENST00000338325 TMX4Q9H1E5 349 aaPredicted RBP15.17■□□□□ 0.02
CSMD2-202ENST00000338325 ECE1P42892 770 aa15.17■□□□□ 0.02
CSMD2-202ENST00000338325 AOC3Q16853 763 aa15.17■□□□□ 0.02
CSMD2-202ENST00000338325 CAPNS2Q96L46 248 aa15.17■□□□□ 0.02
CSMD2-202ENST00000338325 NLRP3Q96P20 1036 aa15.17■□□□□ 0.02
CSMD2-202ENST00000338325 VPS33BQ9H267 617 aa15.17■□□□□ 0.02
CSMD2-202ENST00000338325 ATP6V0A2Q9Y487 856 aa15.17■□□□□ 0.02
CSMD2-202ENST00000338325 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
CSMD2-202ENST00000338325 TRAF5O00463 557 aa15.16■□□□□ 0.02
CSMD2-202ENST00000338325 ABHD8Q96I13 439 aa15.16■□□□□ 0.02
CSMD2-202ENST00000338325 ADARB2Q9NS39 739 aaKnown RBP15.16■□□□□ 0.02
CSMD2-202ENST00000338325 CST9Q5W186 159 aa15.15■□□□□ 0.02
CSMD2-202ENST00000338325 CYP4F22Q6NT55 531 aa15.15■□□□□ 0.02
CSMD2-202ENST00000338325 LRP10Q7Z4F1 713 aa15.15■□□□□ 0.02
CSMD2-202ENST00000338325 SUPT20HQ8NEM7 779 aa15.15■□□□□ 0.02
CSMD2-202ENST00000338325 BEGAINQ9BUH8 593 aa15.15■□□□□ 0.02
CSMD2-202ENST00000338325 UTP14AQ9BVJ6 771 aaKnown RBP15.15■□□□□ 0.02
CSMD2-202ENST00000338325 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
CSMD2-202ENST00000338325 GPRC5DQ9NZD1 345 aa15.15■□□□□ 0.02
CSMD2-202ENST00000338325 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
CSMD2-202ENST00000338325 TLL2Q9Y6L7 1015 aa15.15■□□□□ 0.02
CSMD2-202ENST00000338325 ABCC4O15439 1325 aa15.15■□□□□ 0.02
CSMD2-202ENST00000338325 GRM1Q13255 1194 aa15.14■□□□□ 0.01
CSMD2-202ENST00000338325 SLC10A5Q5PT55 438 aa15.14■□□□□ 0.01
CSMD2-202ENST00000338325 GPR101Q96P66 508 aaPredicted RBP15.14■□□□□ 0.01
CSMD2-202ENST00000338325 RTFDC1Q9BY42 306 aaPredicted RBP15.14■□□□□ 0.01
CSMD2-202ENST00000338325 ZNRF3Q9ULT6 936 aa15.14■□□□□ 0.01
CSMD2-202ENST00000338325 TAF1P21675 1872 aa15.13■□□□□ 0.01
CSMD2-202ENST00000338325 LRRC37AA6NMS7 1700 aa15.13■□□□□ 0.01
CSMD2-202ENST00000338325 PDIA6Q15084 440 aa15.13■□□□□ 0.01
CSMD2-202ENST00000338325 CDHR2Q9BYE9 1310 aa15.12■□□□□ 0.01
CSMD2-202ENST00000338325 EIF2S2P20042 333 aaKnown RBP15.12■□□□□ 0.01
CSMD2-202ENST00000338325 CXCL9Q07325 125 aa15.12■□□□□ 0.01
CSMD2-202ENST00000338325 GMPSP49915 693 aaPredicted RBP15.12■□□□□ 0.01
CSMD2-202ENST00000338325 PROSER3Q2NL68 480 aa15.12■□□□□ 0.01
CSMD2-202ENST00000338325 DPP8Q6V1X1 898 aaPredicted RBP15.12■□□□□ 0.01
CSMD2-202ENST00000338325 SP8Q8IXZ3 490 aa15.12■□□□□ 0.01
CSMD2-202ENST00000338325 DDX60Q8IY21 1712 aaKnown RBP15.12■□□□□ 0.01
CSMD2-202ENST00000338325 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
CSMD2-202ENST00000338325 BBOX1O75936 387 aa15.11■□□□□ 0.01
CSMD2-202ENST00000338325 ANXA1P04083 346 aa15.11■□□□□ 0.01
CSMD2-202ENST00000338325 MAP2K2P36507 400 aa15.11■□□□□ 0.01
CSMD2-202ENST00000338325 KIAA2012Q0VF49 1180 aa15.11■□□□□ 0.01
CSMD2-202ENST00000338325 HSP90AB3PQ58FF7 597 aa15.11■□□□□ 0.01
CSMD2-202ENST00000338325 CIAPIN1Q6FI81 312 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms