RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 BEND3Q5T5X7 828 aa15.09■□□□□ 0.01
SPTLC1-202ENST00000337841 BRIP1Q9BX63 1249 aa15.09■□□□□ 0.01
SPTLC1-202ENST00000337841 SRCIN1Q9C0H9 1055 aa15.09■□□□□ 0.01
SPTLC1-202ENST00000337841 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
SPTLC1-202ENST00000337841 UBN2Q6ZU65 1347 aa15.09■□□□□ 0.01
SPTLC1-202ENST00000337841 NEURL1BA8MQ27 555 aa15.08■□□□□ 0
SPTLC1-202ENST00000337841 IGKV5-2P06315 115 aa15.08■□□□□ 0
SPTLC1-202ENST00000337841 MS4A1P11836 297 aa15.08■□□□□ 0
SPTLC1-202ENST00000337841 PDE6BP35913 854 aa15.08■□□□□ 0
SPTLC1-202ENST00000337841 TGFB2P61812 414 aa15.08■□□□□ 0
SPTLC1-202ENST00000337841 ATF7IPQ6VMQ6 1270 aa15.08■□□□□ 0
SPTLC1-202ENST00000337841 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.08■□□□□ 0
SPTLC1-202ENST00000337841 FHDC1Q9C0D6 1143 aaPredicted RBP15.08■□□□□ 0
SPTLC1-202ENST00000337841 PDZRN3Q9UPQ7 1066 aa15.08■□□□□ 0
SPTLC1-202ENST00000337841 SH3TC1Q8TE82 1336 aa15.08■□□□□ 0
SPTLC1-202ENST00000337841 C4AP0C0L4 1744 aa15.07■□□□□ 0
SPTLC1-202ENST00000337841 NTSR2O95665 410 aa15.07■□□□□ 0
SPTLC1-202ENST00000337841 PCCAP05165 728 aaPredicted RBP15.07■□□□□ 0
SPTLC1-202ENST00000337841 CCT4P50991 539 aaKnown RBP15.07■□□□□ 0
SPTLC1-202ENST00000337841 GCKRQ14397 625 aa15.07■□□□□ 0
SPTLC1-202ENST00000337841 CWF19L2Q2TBE0 894 aaKnown RBP15.07■□□□□ 0
SPTLC1-202ENST00000337841 ERFEQ4G0M1 354 aa15.07■□□□□ 0
SPTLC1-202ENST00000337841 SLC10A5Q5PT55 438 aa15.07■□□□□ 0
SPTLC1-202ENST00000337841 NUTM1Q86Y26 1132 aa15.07■□□□□ 0
SPTLC1-202ENST00000337841 CCDC24Q8N4L8 307 aa15.07■□□□□ 0
SPTLC1-202ENST00000337841 ZBTB38Q8NAP3 1195 aaPredicted RBP15.07■□□□□ 0
SPTLC1-202ENST00000337841 FAM89AQ96GI7 184 aa15.06■□□□□ 0
SPTLC1-202ENST00000337841 NLRP3Q96P20 1036 aa15.06■□□□□ 0
SPTLC1-202ENST00000337841 SYT17Q9BSW7 474 aa15.06■□□□□ 0
SPTLC1-202ENST00000337841 C9orf78Q9NZ63 289 aaPredicted RBP15.06■□□□□ 0
SPTLC1-202ENST00000337841 IBTKQ9P2D0 1353 aaPredicted RBP15.06■□□□□ 0
SPTLC1-202ENST00000337841 H0YIN7 160 aa15.05■□□□□ -0
SPTLC1-202ENST00000337841 H7C1W4 665 aa15.05■□□□□ -0
SPTLC1-202ENST00000337841 IRS4O14654 1257 aaPredicted RBP15.04■□□□□ -0
SPTLC1-202ENST00000337841 ZBTB22O15209 634 aa15.04■□□□□ -0
SPTLC1-202ENST00000337841 TRIM27P14373 513 aa15.04■□□□□ -0
SPTLC1-202ENST00000337841 RTL5Q5HYW3 569 aaPredicted RBP15.04■□□□□ -0
SPTLC1-202ENST00000337841 C2CD5Q86YS7 1000 aa15.04■□□□□ -0
SPTLC1-202ENST00000337841 FTSJ3Q8IY81 847 aaKnown RBP15.04■□□□□ -0
SPTLC1-202ENST00000337841 DZIP1LQ8IYY4 767 aaKnown RBP15.04■□□□□ -0
SPTLC1-202ENST00000337841 CLUAP1Q96AJ1 413 aa15.04■□□□□ -0
SPTLC1-202ENST00000337841 SCN7AQ01118 1682 aa15.03■□□□□ -0
SPTLC1-202ENST00000337841 A0A0G2JLW4 131 aa15.03■□□□□ -0
SPTLC1-202ENST00000337841 HCLS1P14317 486 aaPredicted RBP15.03■□□□□ -0
SPTLC1-202ENST00000337841 INTS3Q68E01 1043 aaKnown RBP15.03■□□□□ -0
SPTLC1-202ENST00000337841 SYNE4Q8N205 404 aa15.03■□□□□ -0
SPTLC1-202ENST00000337841 JARID2Q92833 1246 aaPredicted RBP15.03■□□□□ -0
SPTLC1-202ENST00000337841 HDAC5Q9UQL6 1122 aa15.03■□□□□ -0
SPTLC1-202ENST00000337841 CACNA1FO60840 1977 aa15.03■□□□□ -0
SPTLC1-202ENST00000337841 KLRG2A4D1S0 409 aaPredicted RBP15.02■□□□□ -0
SPTLC1-202ENST00000337841 GRM8O00222 908 aa15.02■□□□□ -0
SPTLC1-202ENST00000337841 DPEP1P16444 411 aa15.02■□□□□ -0
SPTLC1-202ENST00000337841 UBE3BQ7Z3V4 1068 aa15.02■□□□□ -0
SPTLC1-202ENST00000337841 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
SPTLC1-202ENST00000337841 CDHR2Q9BYE9 1310 aa15.01□□□□□ -0.01
SPTLC1-202ENST00000337841 PDE8AO60658 829 aa15.01□□□□□ -0.01
SPTLC1-202ENST00000337841 ZNF622Q969S3 477 aaKnown RBP eCLIP15.01□□□□□ -0.012e-11■■□□□ 12.6
SPTLC1-202ENST00000337841 PIM2Q9P1W9 311 aa15.01□□□□□ -0.01
SPTLC1-202ENST00000337841 C10orf71Q711Q0 1435 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 ABCC4O15439 1325 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 PLIN1O60240 522 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 SRGNP10124 158 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 NPR1P16066 1061 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 CHRNA5P30532 468 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 STYK1Q6J9G0 422 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 NLGN2Q8NFZ4 835 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 RPGRQ92834 1020 aaKnown RBP15□□□□□ -0.01
SPTLC1-202ENST00000337841 MASTLQ96GX5 879 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 RBM17Q96I25 401 aaKnown RBP15□□□□□ -0.01
SPTLC1-202ENST00000337841 USP44Q9H0E7 712 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 NUP98P52948 1817 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 COL24A1Q17RW2 1714 aa15□□□□□ -0.01
SPTLC1-202ENST00000337841 ALDH1B1P30837 517 aa14.99□□□□□ -0.01
SPTLC1-202ENST00000337841 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
SPTLC1-202ENST00000337841 PDE3AQ14432 1141 aa14.99□□□□□ -0.01
SPTLC1-202ENST00000337841 SF3B3Q15393 1217 aaKnown RBP14.99□□□□□ -0.01
SPTLC1-202ENST00000337841 TMEM57Q8N5G2 664 aa14.99□□□□□ -0.01
SPTLC1-202ENST00000337841 CNKSR1Q969H4 720 aa14.99□□□□□ -0.01
SPTLC1-202ENST00000337841 TNNQ9UQP3 1299 aa14.99□□□□□ -0.01
SPTLC1-202ENST00000337841 GNAI3P08754 354 aa14.98□□□□□ -0.01
SPTLC1-202ENST00000337841 KCNA3P22001 575 aa14.98□□□□□ -0.01
SPTLC1-202ENST00000337841 CASP7P55210 303 aa14.98□□□□□ -0.01
SPTLC1-202ENST00000337841 DDX46Q7L014 1031 aaKnown RBP14.98□□□□□ -0.01
SPTLC1-202ENST00000337841 TTLL6Q8N841 843 aa14.98□□□□□ -0.01
SPTLC1-202ENST00000337841 PLA2G12BQ9BX93 195 aa14.98□□□□□ -0.01
SPTLC1-202ENST00000337841 LRP5O75197 1615 aa14.98□□□□□ -0.01
SPTLC1-202ENST00000337841 ABCC12Q96J65 1359 aa14.98□□□□□ -0.01
SPTLC1-202ENST00000337841 UTYO14607 1347 aa14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 PXDNLA1KZ92 1463 aa14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 NBPF7P0C2Y1 421 aaPredicted RBP14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 UBTFL1P0CB47 393 aaPredicted RBP14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 HOXA10P31260 410 aaPredicted RBP14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 CRY2Q49AN0 593 aa14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 CCDC152Q4G0S7 254 aa14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 DALRD3Q5D0E6 543 aaKnown RBP14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 ITPRIPQ8IWB1 547 aa14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 PANK1Q8TE04 598 aa14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 CRAMP1Q96RY5 1269 aa14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 CHMP4BQ9H444 224 aaKnown RBP14.97□□□□□ -0.01
SPTLC1-202ENST00000337841 CTSWP56202 376 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms