RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TMX4Q9H1E5 349 aaPredicted RBP13.95□□□□□ -0.18
CAPN3-202ENST00000337571 DDNO94850 711 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-202ENST00000337571 HTRA3P83110 453 aa13.94□□□□□ -0.18
CAPN3-202ENST00000337571 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
CAPN3-202ENST00000337571 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
CAPN3-202ENST00000337571 KLRG1Q96E93 195 aa13.94□□□□□ -0.18
CAPN3-202ENST00000337571 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
CAPN3-202ENST00000337571 IQCA1LA6NCM1 817 aa13.93□□□□□ -0.18
CAPN3-202ENST00000337571 POTECB2RU33 542 aa13.93□□□□□ -0.18
CAPN3-202ENST00000337571 PARP10Q53GL7 1025 aa13.93□□□□□ -0.18
CAPN3-202ENST00000337571 IFFO2Q5TF58 517 aa13.93□□□□□ -0.18
CAPN3-202ENST00000337571 SUSD4Q5VX71 490 aa13.93□□□□□ -0.18
CAPN3-202ENST00000337571 CC2D2BQ6DHV5 1058 aa13.93□□□□□ -0.18
CAPN3-202ENST00000337571 RUNDC1Q96C34 613 aa13.93□□□□□ -0.18
CAPN3-202ENST00000337571 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
CAPN3-202ENST00000337571 ZNF277Q9NRM2 450 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-202ENST00000337571 SPDYE2BA6NHP3 402 aa13.92□□□□□ -0.18
CAPN3-202ENST00000337571 SPDYE6P0CI01 402 aa13.92□□□□□ -0.18
CAPN3-202ENST00000337571 SPDYE2Q495Y8 402 aa13.92□□□□□ -0.18
CAPN3-202ENST00000337571 GRIPAP1Q4V328 841 aa13.92□□□□□ -0.18
CAPN3-202ENST00000337571 ZNF34Q8IZ26 560 aa13.92□□□□□ -0.18
CAPN3-202ENST00000337571 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
CAPN3-202ENST00000337571 JDP2Q8WYK2 163 aa13.92□□□□□ -0.18
CAPN3-202ENST00000337571 NECTIN2Q92692 538 aa13.92□□□□□ -0.18
CAPN3-202ENST00000337571 NLRP3Q96P20 1036 aa13.92□□□□□ -0.18
CAPN3-202ENST00000337571 AIMP1Q12904 312 aaKnown RBP13.91□□□□□ -0.18
CAPN3-202ENST00000337571 CRY2Q49AN0 593 aa13.91□□□□□ -0.18
CAPN3-202ENST00000337571 HSP90AB3PQ58FF7 597 aa13.91□□□□□ -0.18
CAPN3-202ENST00000337571 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
CAPN3-202ENST00000337571 OLFM4Q6UX06 510 aa13.91□□□□□ -0.18
CAPN3-202ENST00000337571 UTP14AQ9BVJ6 771 aaKnown RBP13.91□□□□□ -0.18
CAPN3-202ENST00000337571 UBN2Q6ZU65 1347 aa13.9□□□□□ -0.18
CAPN3-202ENST00000337571 HOXA10P31260 410 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-202ENST00000337571 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
CAPN3-202ENST00000337571 PDIA6Q15084 440 aa13.9□□□□□ -0.18
CAPN3-202ENST00000337571 COPS6Q7L5N1 327 aa13.9□□□□□ -0.18
CAPN3-202ENST00000337571 ADAMTS8Q9UP79 889 aa13.9□□□□□ -0.18
CAPN3-202ENST00000337571 IBTKQ9P2D0 1353 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-202ENST00000337571 CHL1O00533 1208 aa13.89□□□□□ -0.19
CAPN3-202ENST00000337571 TCERG1O14776 1098 aaKnown RBP13.89□□□□□ -0.19
CAPN3-202ENST00000337571 NTSR2O95665 410 aa13.89□□□□□ -0.19
CAPN3-202ENST00000337571 ANXA1P04083 346 aa13.89□□□□□ -0.19
CAPN3-202ENST00000337571 CRAMP1Q96RY5 1269 aa13.89□□□□□ -0.19
CAPN3-202ENST00000337571 PSMD1Q99460 953 aa13.89□□□□□ -0.19
CAPN3-202ENST00000337571 DDX21Q9NR30 783 aaKnown RBP eCLIP13.89□□□□□ -0.19
CAPN3-202ENST00000337571 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
CAPN3-202ENST00000337571 SCN4AP35499 1836 aa13.88□□□□□ -0.19
CAPN3-202ENST00000337571 ABCC12Q96J65 1359 aa13.88□□□□□ -0.19
CAPN3-202ENST00000337571 PPEF1O14829 653 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-202ENST00000337571 EIF6P56537 245 aaKnown RBP13.88□□□□□ -0.19
CAPN3-202ENST00000337571 XAGE3Q8WTP9 111 aa13.88□□□□□ -0.19
CAPN3-202ENST00000337571 HACL1Q9UJ83 578 aa13.88□□□□□ -0.19
CAPN3-202ENST00000337571 PCNTO95613 3336 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 TCIRG1Q13488 830 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 PROSER3Q2NL68 480 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 EAPPQ56P03 285 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-202ENST00000337571 SLC10A5Q5PT55 438 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 PNMA8AQ86V59 439 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-202ENST00000337571 LDHDQ86WU2 507 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 GPC2Q8N158 579 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 JMYQ8N9B5 988 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 L3MBTL3Q96JM7 780 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-202ENST00000337571 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-202ENST00000337571 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 RIC1Q4ADV7 1423 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 RNF123Q5XPI4 1314 aa13.87□□□□□ -0.19
CAPN3-202ENST00000337571 FZD9O00144 591 aa13.86□□□□□ -0.19
CAPN3-202ENST00000337571 HDGFL1Q5TGJ6 251 aa13.86□□□□□ -0.19
CAPN3-202ENST00000337571 LRP10Q7Z4F1 713 aa13.86□□□□□ -0.19
CAPN3-202ENST00000337571 LARGE2Q8N3Y3 721 aa13.86□□□□□ -0.19
CAPN3-202ENST00000337571 PRKRIP1Q9H875 184 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-202ENST00000337571 DBF4Q9UBU7 674 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-202ENST00000337571 TRMT112Q9UI30 125 aaKnown RBP13.86□□□□□ -0.19
CAPN3-202ENST00000337571 GJA3Q9Y6H8 435 aa13.86□□□□□ -0.19
CAPN3-202ENST00000337571 BBOX1O75936 387 aa13.85□□□□□ -0.19
CAPN3-202ENST00000337571 EPHX2P34913 555 aa13.85□□□□□ -0.19
CAPN3-202ENST00000337571 CALD1Q05682 793 aaKnown RBP13.85□□□□□ -0.19
CAPN3-202ENST00000337571 DDX46Q7L014 1031 aaKnown RBP13.85□□□□□ -0.19
CAPN3-202ENST00000337571 NLRP10Q86W26 655 aa13.85□□□□□ -0.19
CAPN3-202ENST00000337571 CFAP44Q96MT7 982 aa13.85□□□□□ -0.19
CAPN3-202ENST00000337571 ZNF541Q9H0D2 1346 aa13.85□□□□□ -0.19
CAPN3-202ENST00000337571 HOXB7P09629 217 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 POTEIP0CG38 1075 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 POTEJP0CG39 1038 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 LMOD1P29536 600 aaPredicted RBP13.84□□□□□ -0.19
CAPN3-202ENST00000337571 KRT24Q2M2I5 525 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 ANKRD13DQ6ZTN6 518 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 VPS33BQ9H267 617 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 HYPKQ9NX55 129 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 CHPF2Q9P2E5 772 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 ATP6V0A2Q9Y487 856 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 SH3TC1Q8TE82 1336 aa13.84□□□□□ -0.19
CAPN3-202ENST00000337571 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.19
CAPN3-202ENST00000337571 HCLS1P14317 486 aaPredicted RBP13.83□□□□□ -0.2
CAPN3-202ENST00000337571 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
CAPN3-202ENST00000337571 NIM1KQ8IY84 436 aa13.83□□□□□ -0.2
CAPN3-202ENST00000337571 PLBD2Q8NHP8 589 aa13.83□□□□□ -0.2
CAPN3-202ENST00000337571 APAF1O14727 1248 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms