RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TRMT112Q9UI30 125 aaKnown RBP19.49■□□□□ 0.71
SEC13-201ENST00000337354 CD2APQ9Y5K6 639 aa19.49■□□□□ 0.71
SEC13-201ENST00000337354 AFDNP55196 1824 aaKnown RBP19.49■□□□□ 0.71
SEC13-201ENST00000337354 NEURL1BA8MQ27 555 aa19.48■□□□□ 0.71
SEC13-201ENST00000337354 ALDH1L1O75891 902 aa19.48■□□□□ 0.71
SEC13-201ENST00000337354 ST5P78524 1137 aa19.48■□□□□ 0.71
SEC13-201ENST00000337354 NLGN2Q8NFZ4 835 aa19.48■□□□□ 0.71
SEC13-201ENST00000337354 SRCIN1Q9C0H9 1055 aa19.48■□□□□ 0.71
SEC13-201ENST00000337354 FAM177BA6PVY3 158 aa19.47■□□□□ 0.71
SEC13-201ENST00000337354 NTSR2O95665 410 aa19.47■□□□□ 0.71
SEC13-201ENST00000337354 MS4A1P11836 297 aa19.47■□□□□ 0.71
SEC13-201ENST00000337354 CCT4P50991 539 aaKnown RBP19.47■□□□□ 0.71
SEC13-201ENST00000337354 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
SEC13-201ENST00000337354 ZBTB38Q8NAP3 1195 aaPredicted RBP19.47■□□□□ 0.71
SEC13-201ENST00000337354 BRIP1Q9BX63 1249 aa19.47■□□□□ 0.71
SEC13-201ENST00000337354 N4BP2Q86UW6 1770 aaPredicted RBP19.47■□□□□ 0.71
SEC13-201ENST00000337354 TRIM27P14373 513 aa19.46■□□□□ 0.71
SEC13-201ENST00000337354 HSP90B1P14625 803 aaKnown RBP19.46■□□□□ 0.71
SEC13-201ENST00000337354 GCKRQ14397 625 aa19.46■□□□□ 0.71
SEC13-201ENST00000337354 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
SEC13-201ENST00000337354 SLC10A5Q5PT55 438 aa19.46■□□□□ 0.71
SEC13-201ENST00000337354 PELP1Q8IZL8 1130 aaKnown RBP19.46■□□□□ 0.71
SEC13-201ENST00000337354 PDZRN3Q9UPQ7 1066 aa19.46■□□□□ 0.71
SEC13-201ENST00000337354 SH3TC1Q8TE82 1336 aa19.46■□□□□ 0.71
SEC13-201ENST00000337354 PCCAP05165 728 aaPredicted RBP19.45■□□□□ 0.7
SEC13-201ENST00000337354 TGFB2P61812 414 aa19.45■□□□□ 0.7
SEC13-201ENST00000337354 KIAA1551Q9HCM1 1747 aa19.45■□□□□ 0.7
SEC13-201ENST00000337354 C10orf71Q711Q0 1435 aa19.45■□□□□ 0.7
SEC13-201ENST00000337354 PDE6BP35913 854 aa19.44■□□□□ 0.7
SEC13-201ENST00000337354 CACNA1FO60840 1977 aa19.44■□□□□ 0.7
SEC13-201ENST00000337354 H7C1W4 665 aa19.44■□□□□ 0.7
SEC13-201ENST00000337354 ERFEQ4G0M1 354 aa19.44■□□□□ 0.7
SEC13-201ENST00000337354 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
SEC13-201ENST00000337354 NUTM1Q86Y26 1132 aa19.44■□□□□ 0.7
SEC13-201ENST00000337354 FAM89AQ96GI7 184 aa19.44■□□□□ 0.7
SEC13-201ENST00000337354 ABCC4O15439 1325 aa19.43■□□□□ 0.7
SEC13-201ENST00000337354 NRXN2Q9P2S2 1712 aa19.43■□□□□ 0.7
SEC13-201ENST00000337354 DZIP1LQ8IYY4 767 aaKnown RBP19.43■□□□□ 0.7
SEC13-201ENST00000337354 PXDNLA1KZ92 1463 aa19.42■□□□□ 0.7
SEC13-201ENST00000337354 KLRG2A4D1S0 409 aaPredicted RBP19.42■□□□□ 0.7
SEC13-201ENST00000337354 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
SEC13-201ENST00000337354 NLRP3Q96P20 1036 aa19.42■□□□□ 0.7
SEC13-201ENST00000337354 C9orf78Q9NZ63 289 aaPredicted RBP19.42■□□□□ 0.7
SEC13-201ENST00000337354 GRM8O00222 908 aa19.41■□□□□ 0.7
SEC13-201ENST00000337354 CCDC24Q8N4L8 307 aa19.41■□□□□ 0.7
SEC13-201ENST00000337354 CLUAP1Q96AJ1 413 aa19.41■□□□□ 0.7
SEC13-201ENST00000337354 CDHR2Q9BYE9 1310 aa19.41■□□□□ 0.7
SEC13-201ENST00000337354 NUP98P52948 1817 aa19.4■□□□□ 0.7
SEC13-201ENST00000337354 H0YIN7 160 aa19.4■□□□□ 0.7
SEC13-201ENST00000337354 IRS4O14654 1257 aaPredicted RBP19.4■□□□□ 0.7
SEC13-201ENST00000337354 GPR162Q16538 588 aa19.4■□□□□ 0.7
SEC13-201ENST00000337354 RIC1Q4ADV7 1423 aa19.4■□□□□ 0.7
SEC13-201ENST00000337354 CHD4Q14839 1912 aa19.4■□□□□ 0.7
SEC13-201ENST00000337354 UTYO14607 1347 aa19.39■□□□□ 0.69
SEC13-201ENST00000337354 BRCA1P38398 1863 aaKnown RBP19.39■□□□□ 0.69
SEC13-201ENST00000337354 PDE3AQ14432 1141 aa19.39■□□□□ 0.69
SEC13-201ENST00000337354 WWC3Q9ULE0 1092 aa19.39■□□□□ 0.69
SEC13-201ENST00000337354 HDAC5Q9UQL6 1122 aa19.39■□□□□ 0.69
SEC13-201ENST00000337354 PDE8AO60658 829 aa19.38■□□□□ 0.69
SEC13-201ENST00000337354 CRY2Q49AN0 593 aa19.38■□□□□ 0.69
SEC13-201ENST00000337354 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
SEC13-201ENST00000337354 UBE3BQ7Z3V4 1068 aa19.38■□□□□ 0.69
SEC13-201ENST00000337354 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
SEC13-201ENST00000337354 USP44Q9H0E7 712 aa19.38■□□□□ 0.69
SEC13-201ENST00000337354 ARFGEF2Q9Y6D5 1785 aa19.38■□□□□ 0.69
SEC13-201ENST00000337354 HCLS1P14317 486 aaPredicted RBP19.37■□□□□ 0.69
SEC13-201ENST00000337354 CASP7P55210 303 aa19.37■□□□□ 0.69
SEC13-201ENST00000337354 C2CD5Q86YS7 1000 aa19.37■□□□□ 0.69
SEC13-201ENST00000337354 TMEM57Q8N5G2 664 aa19.37■□□□□ 0.69
SEC13-201ENST00000337354 PLA2G12BQ9BX93 195 aa19.37■□□□□ 0.69
SEC13-201ENST00000337354 TNNQ9UQP3 1299 aa19.37■□□□□ 0.69
SEC13-201ENST00000337354 ANKRD31Q8N7Z5 1873 aa19.36■□□□□ 0.69
SEC13-201ENST00000337354 ABCC12Q96J65 1359 aa19.36■□□□□ 0.69
SEC13-201ENST00000337354 DLEC1Q9Y238 1755 aa19.36■□□□□ 0.69
SEC13-201ENST00000337354 PLIN1O60240 522 aa19.36■□□□□ 0.69
SEC13-201ENST00000337354 SRGNP10124 158 aa19.36■□□□□ 0.69
SEC13-201ENST00000337354 SF3B3Q15393 1217 aaKnown RBP19.36■□□□□ 0.69
SEC13-201ENST00000337354 ANKRD36CQ5JPF3 1778 aa19.36■□□□□ 0.69
SEC13-201ENST00000337354 A0A0G2JLW4 131 aa19.35■□□□□ 0.69
SEC13-201ENST00000337354 NBPF7P0C2Y1 421 aaPredicted RBP19.35■□□□□ 0.69
SEC13-201ENST00000337354 NPR1P16066 1061 aa19.35■□□□□ 0.69
SEC13-201ENST00000337354 DPEP1P16444 411 aa19.35■□□□□ 0.69
SEC13-201ENST00000337354 RRP1P56182 461 aaKnown RBP19.35■□□□□ 0.69
SEC13-201ENST00000337354 JARID2Q92833 1246 aaPredicted RBP19.35■□□□□ 0.69
SEC13-201ENST00000337354 MASTLQ96GX5 879 aa19.35■□□□□ 0.69
SEC13-201ENST00000337354 GNAI3P08754 354 aa19.34■□□□□ 0.69
SEC13-201ENST00000337354 RLBP1P12271 317 aa19.34■□□□□ 0.69
SEC13-201ENST00000337354 STYK1Q6J9G0 422 aa19.34■□□□□ 0.69
SEC13-201ENST00000337354 PIM2Q9P1W9 311 aa19.34■□□□□ 0.69
SEC13-201ENST00000337354 COL11A2P13942 1736 aaPredicted RBP19.33■□□□□ 0.69
SEC13-201ENST00000337354 KCNA3P22001 575 aa19.33■□□□□ 0.69
SEC13-201ENST00000337354 CHRNA5P30532 468 aa19.33■□□□□ 0.69
SEC13-201ENST00000337354 ALDH1B1P30837 517 aa19.33■□□□□ 0.69
SEC13-201ENST00000337354 HOXA10P31260 410 aaPredicted RBP19.33■□□□□ 0.69
SEC13-201ENST00000337354 PANK1Q8TE04 598 aa19.33■□□□□ 0.69
SEC13-201ENST00000337354 RPGRQ92834 1020 aaKnown RBP19.33■□□□□ 0.69
SEC13-201ENST00000337354 CHMP4BQ9H444 224 aaKnown RBP19.33■□□□□ 0.69
SEC13-201ENST00000337354 CACNA1SQ13698 1873 aa19.33■□□□□ 0.69
SEC13-201ENST00000337354 UBTFL1P0CB47 393 aaPredicted RBP19.32■□□□□ 0.68
SEC13-201ENST00000337354 CCDC152Q4G0S7 254 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms