RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 EID1Q9Y6B2 187 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 SMC1BQ8NDV3 1235 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 PDCD2Q16342 344 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 ICE2Q659A1 982 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 RASAL2Q9UJF2 1139 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 RPGRIP1LQ68CZ1 1315 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 KANK3Q6NY19 840 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 TDRD12Q587J7 1177 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 ARHGAP24Q8N264 748 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 GBP5Q96PP8 586 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 TSGA10Q9BZW7 698 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 MYH9P35579 1960 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 CEP85LQ5SZL2 805 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 SH3GL3Q99963 347 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 JRKLQ9Y4A0 524 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 PPFIA2O75334 1257 aa11.77□□□□□ -0.52
SPTBN1-201ENST00000333896 LRPPRCP42704 1394 aaKnown RBP11.77□□□□□ -0.52
SPTBN1-201ENST00000333896 NDUFAB1O14561 156 aa11.77□□□□□ -0.52
SPTBN1-201ENST00000333896 VAV2P52735 878 aa11.77□□□□□ -0.52
SPTBN1-201ENST00000333896 CCDC170Q8IYT3 715 aa11.77□□□□□ -0.52
SPTBN1-201ENST00000333896 ATP8B1O43520 1251 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 CCDC92Q53HC0 331 aaPredicted RBP11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 POLR1AO95602 1720 aaPredicted RBP11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 SRGAP3O43295 1099 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 NOP2P46087 812 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 IRX1P78414 480 aaPredicted RBP11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 CCDC63Q8NA47 563 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 STMN1P16949 149 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 PRR16Q569H4 304 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 GTF3C6Q969F1 213 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 TRIM63Q969Q1 353 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 CARMIL1Q5VZK9 1371 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 CHMP2AO43633 222 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 PSMD7P51665 324 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 FERMT1Q9BQL6 677 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 PLVAPQ9BX97 442 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 UBA5Q9GZZ9 404 aa11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 PHAXQ9H814 394 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.77□□□□□ -0.532e-7■■□□□ 14.5
SPTBN1-201ENST00000333896 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-201ENST00000333896 TMC6Q7Z403 805 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 RNF10Q8N5U6 811 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 TRAK1Q9UPV9 953 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 YY1AP1Q9H869 796 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 PFDN1O60925 122 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 GIGYF1O75420 1035 aaPredicted RBP11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 LRRD1A4D1F6 860 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 GOLGA6CA6NDK9 693 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 GOLGA6DP0CG33 693 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 GOLGA6AQ9NYA3 693 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 SATB2Q9UPW6 733 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 SH3BP5O60239 455 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 ZSWIM4Q9H7M6 989 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 HSP90AA5PQ58FG0 334 aa11.76□□□□□ -0.53
SPTBN1-201ENST00000333896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 ZNF445P59923 1031 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 DTNBP1Q96EV8 351 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 ZSCAN16Q9H4T2 348 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 LIMCH1Q9UPQ0 1083 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 SURF6O75683 361 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 ZMYM3Q14202 1370 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 SELENOOQ9BVL4 669 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 CCDC141Q6ZP82 1450 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 EVC2Q86UK5 1308 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 U2AF2P26368 475 aaKnown RBP eCLIP11.75□□□□□ -0.533e-7■■□□□ 13.4
SPTBN1-201ENST00000333896 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 CASQ2O14958 399 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 USP5P45974 858 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 RMDN2Q96LZ7 410 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 GEMIN8Q9NWZ8 242 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 KIF5AQ12840 1032 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 SNCBQ16143 134 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 PDCD7Q8N8D1 485 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 CPLX3Q8WVH0 158 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 IMPACTQ9P2X3 320 aa11.75□□□□□ -0.53
SPTBN1-201ENST00000333896 MYH11P35749 1972 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 PRPHP41219 470 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 BMP2KLQ5H9B9 411 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 SEPT8Q92599 483 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 LRRC45Q96CN5 670 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 NDC80O14777 642 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 CCDC144CPQ8IYA2 1237 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 GPR161Q8N6U8 529 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 TBC1D31Q96DN5 1066 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 NACAP1Q9BZK3 213 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 PPP4R3AQ6IN85 833 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 MIER3Q7Z3K6 550 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 PDRG1Q9NUG6 133 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 RNF8O76064 485 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 CHMP4BP1P59074 171 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms