RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 FAM227BQ96M60 508 aa16.04■□□□□ 0.16
PRKD1-201ENST00000331968 CWC22Q9HCG8 908 aaKnown RBP16.04■□□□□ 0.16
PRKD1-201ENST00000331968 UBAP1LF5GYI3 381 aa16.04■□□□□ 0.16
PRKD1-201ENST00000331968 HTATSF1O43719 755 aaKnown RBP16.04■□□□□ 0.16
PRKD1-201ENST00000331968 PHKG2P15735 406 aa16.04■□□□□ 0.16
PRKD1-201ENST00000331968 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
PRKD1-201ENST00000331968 TRIM5Q9C035 493 aa16.04■□□□□ 0.16
PRKD1-201ENST00000331968 CNPY2Q9Y2B0 182 aa16.04■□□□□ 0.16
PRKD1-201ENST00000331968 MPHOSPH8Q99549 860 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 USP26Q9BXU7 913 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 TFIP11Q9UBB9 837 aaKnown RBP16.03■□□□□ 0.16
PRKD1-201ENST00000331968 DEPDC5O75140 1603 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 SLFNL1Q499Z3 407 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 CYP27B1O15528 508 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 RAD21O60216 631 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 GADD45BO75293 160 aaPredicted RBP16.03■□□□□ 0.16
PRKD1-201ENST00000331968 ERC1Q8IUD2 1116 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 PIBF1Q8WXW3 757 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 DCAF5Q96JK2 942 aa16.03■□□□□ 0.16
PRKD1-201ENST00000331968 ERBB3P21860 1342 aa16.02■□□□□ 0.16
PRKD1-201ENST00000331968 CHMLP26374 656 aa16.02■□□□□ 0.16
PRKD1-201ENST00000331968 PDRG1Q9NUG6 133 aa16.02■□□□□ 0.16
PRKD1-201ENST00000331968 CYP46A1Q9Y6A2 500 aa16.02■□□□□ 0.16
PRKD1-201ENST00000331968 SETBP1Q9Y6X0 1596 aa16.02■□□□□ 0.16
PRKD1-201ENST00000331968 RAB11FIP3O75154 756 aa16.02■□□□□ 0.15
PRKD1-201ENST00000331968 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.15
PRKD1-201ENST00000331968 CCT2P78371 535 aaKnown RBP16.02■□□□□ 0.15
PRKD1-201ENST00000331968 TLR7Q9NYK1 1049 aaKnown RBP16.02■□□□□ 0.15
PRKD1-201ENST00000331968 ARHGEF10O15013 1369 aa16.02■□□□□ 0.15
PRKD1-201ENST00000331968 ADCY5O95622 1261 aa16.02■□□□□ 0.15
PRKD1-201ENST00000331968 RNF20Q5VTR2 975 aa16.02■□□□□ 0.15
PRKD1-201ENST00000331968 DBNDD2Q9BQY9 259 aa16.02■□□□□ 0.15
PRKD1-201ENST00000331968 TMEM131LA2VDJ0 1609 aa16.01■□□□□ 0.15
PRKD1-201ENST00000331968 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
PRKD1-201ENST00000331968 LMBRD1Q9NUN5 540 aa16.01■□□□□ 0.15
PRKD1-201ENST00000331968 CWC25Q9NXE8 425 aaPredicted RBP16.01■□□□□ 0.15
PRKD1-201ENST00000331968 CDK11BP21127 795 aaKnown RBP16.01■□□□□ 0.15
PRKD1-201ENST00000331968 FAM173BQ6P4H8 233 aa16.01■□□□□ 0.15
PRKD1-201ENST00000331968 OFD1O75665 1012 aa16.01■□□□□ 0.15
PRKD1-201ENST00000331968 BEND3Q5T5X7 828 aa16.01■□□□□ 0.15
PRKD1-201ENST00000331968 USP48Q86UV5 1035 aa16.01■□□□□ 0.15
PRKD1-201ENST00000331968 BLOC1S2Q6QNY1 142 aa16■□□□□ 0.15
PRKD1-201ENST00000331968 BRINP3Q76B58 766 aa16■□□□□ 0.15
PRKD1-201ENST00000331968 PPLO60437 1756 aa16■□□□□ 0.15
PRKD1-201ENST00000331968 CCDC158Q5M9N0 1113 aa16■□□□□ 0.15
PRKD1-201ENST00000331968 BECN2A8MW95 431 aa15.99■□□□□ 0.15
PRKD1-201ENST00000331968 CPLX1O14810 134 aa15.99■□□□□ 0.15
PRKD1-201ENST00000331968 IFIT5Q13325 482 aaKnown RBP15.99■□□□□ 0.15
PRKD1-201ENST00000331968 NFXL1Q6ZNB6 911 aa15.99■□□□□ 0.15
PRKD1-201ENST00000331968 SEC62Q99442 399 aaKnown RBP15.99■□□□□ 0.15
PRKD1-201ENST00000331968 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
PRKD1-201ENST00000331968 SF3A1Q15459 793 aaKnown RBP15.99■□□□□ 0.15
PRKD1-201ENST00000331968 LRSAM1Q6UWE0 723 aa15.99■□□□□ 0.15
PRKD1-201ENST00000331968 GPT2Q8TD30 523 aa15.99■□□□□ 0.15
PRKD1-201ENST00000331968 EAF2Q96CJ1 260 aaPredicted RBP15.99■□□□□ 0.15
PRKD1-201ENST00000331968 ZKSCAN5Q9Y2L8 839 aa15.99■□□□□ 0.15
PRKD1-201ENST00000331968 ATP6V1AP38606 617 aa15.99■□□□□ 0.15
PRKD1-201ENST00000331968 NMIQ13287 307 aaPredicted RBP15.99■□□□□ 0.15
PRKD1-201ENST00000331968 CHGBP05060 677 aa15.98■□□□□ 0.15
PRKD1-201ENST00000331968 CCDC144CPQ8IYA2 1237 aa15.98■□□□□ 0.15
PRKD1-201ENST00000331968 GOLGA6L19H0YKK7 550 aa15.98■□□□□ 0.15
PRKD1-201ENST00000331968 CREBRFQ8IUR6 639 aa15.98■□□□□ 0.15
PRKD1-201ENST00000331968 C16orf45Q96MC5 204 aaPredicted RBP15.98■□□□□ 0.15
PRKD1-201ENST00000331968 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRKD1-201ENST00000331968 FAM98CQ17RN3 349 aaKnown RBP15.98■□□□□ 0.15
PRKD1-201ENST00000331968 LARP1BQ659C4 914 aaKnown RBP15.98■□□□□ 0.15
PRKD1-201ENST00000331968 FILIP1Q7Z7B0 1213 aa15.98■□□□□ 0.15
PRKD1-201ENST00000331968 CDK12Q9NYV4 1490 aaPredicted RBP15.98■□□□□ 0.15
PRKD1-201ENST00000331968 SNAP23O00161 211 aa15.97■□□□□ 0.15
PRKD1-201ENST00000331968 WDR33Q9C0J8 1336 aaKnown RBP15.97■□□□□ 0.15
PRKD1-201ENST00000331968 ZC3H13Q5T200 1668 aaKnown RBP15.97■□□□□ 0.15
PRKD1-201ENST00000331968 MAP2P11137 1827 aaKnown RBP15.97■□□□□ 0.15
PRKD1-201ENST00000331968 LAMC1P11047 1609 aa15.97■□□□□ 0.15
PRKD1-201ENST00000331968 GCKRQ14397 625 aa15.97■□□□□ 0.15
PRKD1-201ENST00000331968 EPHA10Q5JZY3 1008 aa15.97■□□□□ 0.15
PRKD1-201ENST00000331968 RALYLQ86SE5 291 aaKnown RBP15.97■□□□□ 0.15
PRKD1-201ENST00000331968 DDB1Q16531 1140 aa15.97■□□□□ 0.15
PRKD1-201ENST00000331968 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
PRKD1-201ENST00000331968 ATP6V1DQ9Y5K8 247 aa15.97■□□□□ 0.15
PRKD1-201ENST00000331968 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
PRKD1-201ENST00000331968 CCAR2Q8N163 923 aaKnown RBP15.96■□□□□ 0.15
PRKD1-201ENST00000331968 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.96■□□□□ 0.15
PRKD1-201ENST00000331968 V9GYY5 206 aaPredicted RBP15.96■□□□□ 0.15
PRKD1-201ENST00000331968 RBM8AQ9Y5S9 174 aaKnown RBP15.96■□□□□ 0.15
PRKD1-201ENST00000331968 PPP4R3BQ5MIZ7 849 aa15.96■□□□□ 0.15
PRKD1-201ENST00000331968 SASS6Q6UVJ0 657 aa15.96■□□□□ 0.15
PRKD1-201ENST00000331968 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
PRKD1-201ENST00000331968 TPD52L1Q16890 204 aaPredicted RBP15.95■□□□□ 0.14
PRKD1-201ENST00000331968 PUS3Q9BZE2 481 aaKnown RBP15.95■□□□□ 0.14
PRKD1-201ENST00000331968 RICTORQ6R327 1708 aa15.95■□□□□ 0.14
PRKD1-201ENST00000331968 TRDNQ13061 729 aa15.95■□□□□ 0.14
PRKD1-201ENST00000331968 KLHL34Q8N239 644 aa15.95■□□□□ 0.14
PRKD1-201ENST00000331968 TRERF1Q96PN7 1200 aa15.95■□□□□ 0.14
PRKD1-201ENST00000331968 LMTK3Q96Q04 1460 aa15.94■□□□□ 0.14
PRKD1-201ENST00000331968 NEURL1BA8MQ27 555 aa15.94■□□□□ 0.14
PRKD1-201ENST00000331968 G3V3G9 751 aa15.94■□□□□ 0.14
PRKD1-201ENST00000331968 TAF5LO75529 589 aa15.94■□□□□ 0.14
PRKD1-201ENST00000331968 LRRC24Q50LG9 513 aa15.94■□□□□ 0.14
PRKD1-201ENST00000331968 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms