RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 CCDC63Q8NA47 563 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 TMCO4Q5TGY1 634 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 GPATCH11Q8N954 259 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
CLN8-201ENST00000331222 SBNO2Q9Y2G9 1366 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 IPO4Q8TEX9 1081 aaKnown RBP12.15□□□□□ -0.46
CLN8-201ENST00000331222 PPM1EQ8WY54 764 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 GJA3Q9Y6H8 435 aa12.15□□□□□ -0.46
CLN8-201ENST00000331222 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.47
CLN8-201ENST00000331222 TCP11L1Q9NUJ3 509 aa12.15□□□□□ -0.47
CLN8-201ENST00000331222 SMIM23A6NLE4 172 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 USO1O60763 962 aaKnown RBP12.14□□□□□ -0.47
CLN8-201ENST00000331222 PPARDQ03181 441 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 MFSD6Q6ZSS7 791 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 PDCL2Q8N4E4 241 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 PAFAH1B1P43034 410 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 TAF12Q16514 161 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 MTERF4Q7Z6M4 381 aaKnown RBP12.14□□□□□ -0.47
CLN8-201ENST00000331222 FSD2A1L4K1 749 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 GJB2P29033 226 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 ATP6V1AP38606 617 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 BICRAQ9NZM4 1560 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 USP16Q9Y5T5 823 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 PRG4Q92954 1404 aaPredicted RBP12.14□□□□□ -0.47
CLN8-201ENST00000331222 MXRA7P84157 204 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 CHST3Q7LGC8 479 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 ANO10Q9NW15 660 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 IKBKGQ9Y6K9 419 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 CETN1Q12798 172 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
CLN8-201ENST00000331222 PLIN2Q99541 437 aa12.14□□□□□ -0.47
CLN8-201ENST00000331222 GLRX3O76003 335 aaKnown RBP12.13□□□□□ -0.47
CLN8-201ENST00000331222 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLN8-201ENST00000331222 PDE3AQ14432 1141 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 NCOA2Q15596 1464 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 GSTA5Q7RTV2 222 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 TCHPQ9BT92 498 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 FAM83GA6ND36 823 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 EEF2P13639 858 aaKnown RBP12.13□□□□□ -0.47
CLN8-201ENST00000331222 EXOC1Q9NV70 894 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 TOP2BQ02880 1626 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 EP400NLQ6ZTU2 488 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 PDE4BQ07343 736 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 KRT28Q7Z3Y7 464 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
CLN8-201ENST00000331222 BAG3O95817 575 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 IFIT1BQ5T764 474 aaKnown RBP12.12□□□□□ -0.47
CLN8-201ENST00000331222 KCNH5Q8NCM2 988 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 YEATS4O95619 227 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 NECAB1Q8N987 351 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 CSPG5O95196 566 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 USP25Q9UHP3 1055 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 ANKRD30BQ9BXX2 1392 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 STX6O43752 255 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 MAP9Q49MG5 647 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 CWC25Q9NXE8 425 aaPredicted RBP12.12□□□□□ -0.47
CLN8-201ENST00000331222 EMILIN1Q9Y6C2 1016 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 UBA7P41226 1012 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 CCDC183Q5T5S1 534 aa12.12□□□□□ -0.47
CLN8-201ENST00000331222 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
CLN8-201ENST00000331222 KRT13P13646 458 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 C20orf194Q5TEA3 1177 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 RAB3IL1Q8TBN0 382 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 TBCAO75347 108 aaKnown RBP12.11□□□□□ -0.47
CLN8-201ENST00000331222 HARSP12081 509 aaKnown RBP12.11□□□□□ -0.47
CLN8-201ENST00000331222 SSFA2P28290 1259 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 TAOK3Q9H2K8 898 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 CCDC160A6NGH7 325 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 CCDC175P0C221 793 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 TBC1D5Q92609 795 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 TCEANC2Q96MN5 208 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 CDC5LQ99459 802 aaKnown RBP12.11□□□□□ -0.47
CLN8-201ENST00000331222 ZWINTO95229 277 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 CYP7A1P22680 504 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 PRKG1Q13976 671 aa12.11□□□□□ -0.47
CLN8-201ENST00000331222 ZNF830Q96NB3 372 aaPredicted RBP12.11□□□□□ -0.47
CLN8-201ENST00000331222 AAMPQ13685 434 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 ZSCAN12O43309 604 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 ACTN2P35609 894 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 STAT6P42226 847 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 SYNJ2O15056 1496 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 IRX5P78411 483 aaPredicted RBP12.1□□□□□ -0.47
CLN8-201ENST00000331222 PPP2R5CQ13362 524 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 CFAP58Q5T655 872 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 KIF18AQ8NI77 898 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 MPHOSPH6Q99547 160 aaKnown RBP12.1□□□□□ -0.47
CLN8-201ENST00000331222 SAP30BPQ9UHR5 308 aaKnown RBP12.1□□□□□ -0.47
CLN8-201ENST00000331222 IGF1RP08069 1367 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 MCM4P33991 863 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
CLN8-201ENST00000331222 SLC39A6Q13433 755 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 ALS2CR12Q96Q35 445 aa12.1□□□□□ -0.47
CLN8-201ENST00000331222 SLC4A4Q9Y6R1 1079 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms