RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ROBO2Q9HCK4 1378 aa28.64■■■□□ 2.18
SOX1-201ENST00000330949 TPM4P67936 248 aa28.64■■■□□ 2.17
SOX1-201ENST00000330949 TTC21BQ7Z4L5 1316 aa28.63■■■□□ 2.17
SOX1-201ENST00000330949 PNMA6AP0CW24 399 aaPredicted RBP28.63■■■□□ 2.17
SOX1-201ENST00000330949 MUM1L1Q5H9M0 696 aa28.63■■■□□ 2.17
SOX1-201ENST00000330949 TRMT1Q9NXH9 659 aaKnown RBP28.63■■■□□ 2.17
SOX1-201ENST00000330949 ACEP12821 1306 aa28.63■■■□□ 2.17
SOX1-201ENST00000330949 CCDC69A6NI79 296 aa28.63■■■□□ 2.17
SOX1-201ENST00000330949 CLCN6P51797 869 aa28.63■■■□□ 2.17
SOX1-201ENST00000330949 NPHP1O15259 732 aa28.62■■■□□ 2.17
SOX1-201ENST00000330949 CCZ1BP86790 482 aa28.62■■■□□ 2.17
SOX1-201ENST00000330949 CCZ1P86791 482 aaPredicted RBP28.62■■■□□ 2.17
SOX1-201ENST00000330949 ERCC6LQ2NKX8 1250 aa28.62■■■□□ 2.17
SOX1-201ENST00000330949 EFCC1Q9HA90 598 aa28.62■■■□□ 2.17
SOX1-201ENST00000330949 ARID5BQ14865 1188 aa28.62■■■□□ 2.17
SOX1-201ENST00000330949 PPP6R1Q9UPN7 881 aa28.62■■■□□ 2.17
SOX1-201ENST00000330949 CEBPAP49715 358 aaPredicted RBP28.61■■■□□ 2.17
SOX1-201ENST00000330949 CPA1P15085 419 aa28.61■■■□□ 2.17
SOX1-201ENST00000330949 ARGLU1Q9NWB6 273 aaPredicted RBP28.61■■■□□ 2.17
SOX1-201ENST00000330949 CYP46A1Q9Y6A2 500 aa28.61■■■□□ 2.17
SOX1-201ENST00000330949 TNNT3P45378 269 aaPredicted RBP28.61■■■□□ 2.17
SOX1-201ENST00000330949 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
SOX1-201ENST00000330949 FERMT3Q86UX7 667 aa28.61■■■□□ 2.17
SOX1-201ENST00000330949 CHMP4AQ9BY43 222 aa28.61■■■□□ 2.17
SOX1-201ENST00000330949 TM6SF1Q9BZW5 370 aa28.61■■■□□ 2.17
SOX1-201ENST00000330949 CDC37L1Q7L3B6 337 aa28.6■■■□□ 2.17
SOX1-201ENST00000330949 G2E3Q7L622 706 aa28.6■■■□□ 2.17
SOX1-201ENST00000330949 CNTROBQ8N137 903 aa28.6■■■□□ 2.17
SOX1-201ENST00000330949 AATKQ6ZMQ8 1374 aa28.6■■■□□ 2.17
SOX1-201ENST00000330949 LTKP29376 864 aa28.6■■■□□ 2.17
SOX1-201ENST00000330949 PLA2G4AP47712 749 aa28.6■■■□□ 2.17
SOX1-201ENST00000330949 NUTM2GQ5VZR2 741 aa28.6■■■□□ 2.17
SOX1-201ENST00000330949 IQCB1Q15051 598 aa28.59■■■□□ 2.17
SOX1-201ENST00000330949 FILIP1Q7Z7B0 1213 aa28.59■■■□□ 2.17
SOX1-201ENST00000330949 ARHGEF10O15013 1369 aa28.59■■■□□ 2.17
SOX1-201ENST00000330949 JAKMIP1Q96N16 626 aaKnown RBP28.59■■■□□ 2.17
SOX1-201ENST00000330949 ADGRL3Q9HAR2 1447 aa28.59■■■□□ 2.17
SOX1-201ENST00000330949 SNW1Q13573 536 aaKnown RBP28.58■■■□□ 2.17
SOX1-201ENST00000330949 NR1I2O75469 434 aa28.58■■■□□ 2.17
SOX1-201ENST00000330949 LEO1Q8WVC0 666 aaPredicted RBP28.58■■■□□ 2.17
SOX1-201ENST00000330949 ZSWIM6Q9HCJ5 1215 aa28.58■■■□□ 2.17
SOX1-201ENST00000330949 GSDMDP57764 484 aa28.57■■■□□ 2.16
SOX1-201ENST00000330949 ST3GAL1Q11201 340 aa28.57■■■□□ 2.16
SOX1-201ENST00000330949 ME3Q16798 604 aa28.57■■■□□ 2.16
SOX1-201ENST00000330949 BICD2Q8TD16 824 aa28.57■■■□□ 2.16
SOX1-201ENST00000330949 RASSF4Q9H2L5 321 aa28.57■■■□□ 2.16
SOX1-201ENST00000330949 TUBB4AP04350 444 aa28.57■■■□□ 2.16
SOX1-201ENST00000330949 FAM173BQ6P4H8 233 aa28.57■■■□□ 2.16
SOX1-201ENST00000330949 AGLP35573 1532 aa28.57■■■□□ 2.16
SOX1-201ENST00000330949 MAP4K4O95819 1239 aaPredicted RBP28.56■■■□□ 2.16
SOX1-201ENST00000330949 TMCO3Q6UWJ1 677 aa28.56■■■□□ 2.16
SOX1-201ENST00000330949 IL1RAPL2Q9NP60 686 aa28.56■■■□□ 2.16
SOX1-201ENST00000330949 GPS2Q13227 327 aa28.56■■■□□ 2.16
SOX1-201ENST00000330949 SOS1Q07889 1333 aaPredicted RBP28.56■■■□□ 2.16
SOX1-201ENST00000330949 NUTM1Q86Y26 1132 aa28.56■■■□□ 2.16
SOX1-201ENST00000330949 PI4K2BQ8TCG2 481 aa28.56■■■□□ 2.16
SOX1-201ENST00000330949 USP16Q9Y5T5 823 aa28.56■■■□□ 2.16
SOX1-201ENST00000330949 ZRANB2O95218 330 aaKnown RBP eCLIP28.55■■■□□ 2.16
SOX1-201ENST00000330949 ARHGAP29Q52LW3 1261 aa28.55■■■□□ 2.16
SOX1-201ENST00000330949 CCDC93Q567U6 631 aa28.55■■■□□ 2.16
SOX1-201ENST00000330949 DTNBO60941 627 aa28.55■■■□□ 2.16
SOX1-201ENST00000330949 CWC27Q6UX04 472 aaKnown RBP28.55■■■□□ 2.16
SOX1-201ENST00000330949 SPG7Q9UQ90 795 aa28.55■■■□□ 2.16
SOX1-201ENST00000330949 TSPYL4Q9UJ04 414 aa28.54■■■□□ 2.16
SOX1-201ENST00000330949 RAB11FIP3O75154 756 aa28.54■■■□□ 2.16
SOX1-201ENST00000330949 NECAB1Q8N987 351 aa28.54■■■□□ 2.16
SOX1-201ENST00000330949 NEK11Q8NG66 645 aa28.54■■■□□ 2.16
SOX1-201ENST00000330949 BECN2A8MW95 431 aa28.53■■■□□ 2.16
SOX1-201ENST00000330949 TFIP11Q9UBB9 837 aaKnown RBP28.53■■■□□ 2.16
SOX1-201ENST00000330949 ATP8B1O43520 1251 aa28.53■■■□□ 2.16
SOX1-201ENST00000330949 RUFY2Q8WXA3 655 aa28.53■■■□□ 2.16
SOX1-201ENST00000330949 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.53■■■□□ 2.16
SOX1-201ENST00000330949 CHD2O14647 1828 aaKnown RBP28.53■■■□□ 2.16
SOX1-201ENST00000330949 STX1AQ16623 288 aa28.52■■■□□ 2.16
SOX1-201ENST00000330949 ADCK5Q3MIX3 580 aa28.52■■■□□ 2.16
SOX1-201ENST00000330949 MTHFSDQ2M296 383 aaKnown RBP28.51■■■□□ 2.15
SOX1-201ENST00000330949 KRBA2Q6ZNG9 492 aa28.51■■■□□ 2.15
SOX1-201ENST00000330949 LTV1Q96GA3 475 aaPredicted RBP28.51■■■□□ 2.15
SOX1-201ENST00000330949 RSPH14Q9UHP6 348 aa28.51■■■□□ 2.15
SOX1-201ENST00000330949 LRRFIP2Q9Y608 721 aaKnown RBP28.51■■■□□ 2.15
SOX1-201ENST00000330949 CWC15Q9P013 229 aaKnown RBP28.51■■■□□ 2.15
SOX1-201ENST00000330949 POLR3GO15318 223 aaPredicted RBP28.5■■■□□ 2.15
SOX1-201ENST00000330949 CTAGE5O15320 804 aa28.5■■■□□ 2.15
SOX1-201ENST00000330949 TRHP20396 242 aaPredicted RBP28.5■■■□□ 2.15
SOX1-201ENST00000330949 KCNB2Q92953 911 aa28.5■■■□□ 2.15
SOX1-201ENST00000330949 PRPF40BQ6NWY9 871 aaKnown RBP28.5■■■□□ 2.15
SOX1-201ENST00000330949 UBXN4Q92575 508 aa28.5■■■□□ 2.15
SOX1-201ENST00000330949 STK31Q9BXU1 1019 aa28.5■■■□□ 2.15
SOX1-201ENST00000330949 MAP3K19Q56UN5 1328 aa28.49■■■□□ 2.15
SOX1-201ENST00000330949 PSDA5PKW4 1024 aaPredicted RBP28.49■■■□□ 2.15
SOX1-201ENST00000330949 ZKSCAN1P17029 563 aaPredicted RBP28.49■■■□□ 2.15
SOX1-201ENST00000330949 C11orf57Q6ZUT1 292 aaPredicted RBP28.49■■■□□ 2.15
SOX1-201ENST00000330949 PGBD1Q96JS3 809 aa28.49■■■□□ 2.15
SOX1-201ENST00000330949 IMPACTQ9P2X3 320 aa28.49■■■□□ 2.15
SOX1-201ENST00000330949 TPCN1Q9ULQ1 816 aa28.49■■■□□ 2.15
SOX1-201ENST00000330949 SYT10Q6XYQ8 523 aa28.49■■■□□ 2.15
SOX1-201ENST00000330949 TNRQ92752 1358 aa28.49■■■□□ 2.15
SOX1-201ENST00000330949 OSBPL5Q9H0X9 879 aaPredicted RBP28.48■■■□□ 2.15
SOX1-201ENST00000330949 YY1AP1Q9H869 796 aa28.48■■■□□ 2.15
SOX1-201ENST00000330949 TMEM2Q9UHN6 1383 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms