RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
RPAIN-201ENST00000327154 C3orf67Q6ZVT6 689 aa18.43■□□□□ 0.54
RPAIN-201ENST00000327154 RBM17Q96I25 401 aaKnown RBP18.43■□□□□ 0.54
RPAIN-201ENST00000327154 DDX21Q9NR30 783 aaKnown RBP eCLIP18.43■□□□□ 0.54
RPAIN-201ENST00000327154 NLRP3Q96P20 1036 aa18.42■□□□□ 0.54
RPAIN-201ENST00000327154 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
RPAIN-201ENST00000327154 TIAM2Q8IVF5 1701 aa18.42■□□□□ 0.54
RPAIN-201ENST00000327154 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
RPAIN-201ENST00000327154 IARSP41252 1262 aaKnown RBP18.41■□□□□ 0.54
RPAIN-201ENST00000327154 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
RPAIN-201ENST00000327154 CC2D2BQ6DHV5 1058 aa18.41■□□□□ 0.54
RPAIN-201ENST00000327154 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
RPAIN-201ENST00000327154 CHPF2Q9P2E5 772 aa18.41■□□□□ 0.54
RPAIN-201ENST00000327154 NUP98P52948 1817 aa18.41■□□□□ 0.54
RPAIN-201ENST00000327154 CACNA1SQ13698 1873 aa18.4■□□□□ 0.54
RPAIN-201ENST00000327154 APAF1O14727 1248 aa18.4■□□□□ 0.54
RPAIN-201ENST00000327154 TCIRG1Q13488 830 aa18.4■□□□□ 0.54
RPAIN-201ENST00000327154 HSP90AB3PQ58FF7 597 aa18.4■□□□□ 0.54
RPAIN-201ENST00000327154 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
RPAIN-201ENST00000327154 KLRG1Q96E93 195 aa18.4■□□□□ 0.54
RPAIN-201ENST00000327154 PSMD1Q99460 953 aa18.4■□□□□ 0.54
RPAIN-201ENST00000327154 ARFGEF2Q9Y6D5 1785 aa18.4■□□□□ 0.54
RPAIN-201ENST00000327154 NLRP10Q86W26 655 aa18.39■□□□□ 0.53
RPAIN-201ENST00000327154 MBIPQ9NS73 344 aa18.39■□□□□ 0.53
RPAIN-201ENST00000327154 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
RPAIN-201ENST00000327154 ZNF541Q9H0D2 1346 aa18.39■□□□□ 0.53
RPAIN-201ENST00000327154 RIC1Q4ADV7 1423 aa18.39■□□□□ 0.53
RPAIN-201ENST00000327154 IQCA1LA6NCM1 817 aa18.38■□□□□ 0.53
RPAIN-201ENST00000327154 FZD9O00144 591 aa18.38■□□□□ 0.53
RPAIN-201ENST00000327154 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
RPAIN-201ENST00000327154 HOXB7P09629 217 aa18.38■□□□□ 0.53
RPAIN-201ENST00000327154 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
RPAIN-201ENST00000327154 POTEJP0CG39 1038 aa18.38■□□□□ 0.53
RPAIN-201ENST00000327154 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
RPAIN-201ENST00000327154 SLC51AQ86UW1 340 aa18.38■□□□□ 0.53
RPAIN-201ENST00000327154 L3MBTL3Q96JM7 780 aaPredicted RBP18.38■□□□□ 0.53
RPAIN-201ENST00000327154 DICER1Q9UPY3 1922 aaKnown RBP18.37■□□□□ 0.53
RPAIN-201ENST00000327154 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
RPAIN-201ENST00000327154 GRIPAP1Q4V328 841 aa18.37■□□□□ 0.53
RPAIN-201ENST00000327154 CHADLQ6NUI6 762 aa18.37■□□□□ 0.53
RPAIN-201ENST00000327154 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
RPAIN-201ENST00000327154 ZNF428Q96B54 188 aa18.37■□□□□ 0.53
RPAIN-201ENST00000327154 TAF1DQ9H5J8 278 aaPredicted RBP18.37■□□□□ 0.53
RPAIN-201ENST00000327154 DBF4Q9UBU7 674 aaPredicted RBP18.37■□□□□ 0.53
RPAIN-201ENST00000327154 TRMT112Q9UI30 125 aaKnown RBP18.37■□□□□ 0.53
RPAIN-201ENST00000327154 ZNF853P0CG23 659 aa18.36■□□□□ 0.53
RPAIN-201ENST00000327154 ANKRD13DQ6ZTN6 518 aa18.36■□□□□ 0.53
RPAIN-201ENST00000327154 PLBD2Q8NHP8 589 aa18.36■□□□□ 0.53
RPAIN-201ENST00000327154 SNED1Q8TER0 1413 aa18.35■□□□□ 0.53
RPAIN-201ENST00000327154 RNF123Q5XPI4 1314 aa18.35■□□□□ 0.53
RPAIN-201ENST00000327154 JMYQ8N9B5 988 aa18.35■□□□□ 0.53
RPAIN-201ENST00000327154 TMX4Q9H1E5 349 aaPredicted RBP18.35■□□□□ 0.53
RPAIN-201ENST00000327154 SH3TC1Q8TE82 1336 aa18.34■□□□□ 0.53
RPAIN-201ENST00000327154 LARGE2Q8N3Y3 721 aa18.34■□□□□ 0.53
RPAIN-201ENST00000327154 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
RPAIN-201ENST00000327154 HACL1Q9UJ83 578 aa18.34■□□□□ 0.53
RPAIN-201ENST00000327154 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
RPAIN-201ENST00000327154 ATP5J2-PTCD1G3V325 749 aa18.33■□□□□ 0.52
RPAIN-201ENST00000327154 ELL2O00472 640 aaPredicted RBP18.33■□□□□ 0.52
RPAIN-201ENST00000327154 BBOX1O75936 387 aa18.33■□□□□ 0.52
RPAIN-201ENST00000327154 EIF6P56537 245 aaKnown RBP18.33■□□□□ 0.52
RPAIN-201ENST00000327154 GNAI1P63096 354 aa18.33■□□□□ 0.52
RPAIN-201ENST00000327154 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.52
RPAIN-201ENST00000327154 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
RPAIN-201ENST00000327154 EAPPQ56P03 285 aaPredicted RBP18.33■□□□□ 0.52
RPAIN-201ENST00000327154 LDHDQ86WU2 507 aa18.33■□□□□ 0.52
RPAIN-201ENST00000327154 GPC2Q8N158 579 aa18.33■□□□□ 0.52
RPAIN-201ENST00000327154 IFT57Q9NWB7 429 aa18.33■□□□□ 0.52
RPAIN-201ENST00000327154 ABCC4O15439 1325 aa18.32■□□□□ 0.52
RPAIN-201ENST00000327154 EPHX2P34913 555 aa18.32■□□□□ 0.52
RPAIN-201ENST00000327154 IFFO2Q5TF58 517 aa18.32■□□□□ 0.52
RPAIN-201ENST00000327154 DDX46Q7L014 1031 aaKnown RBP18.32■□□□□ 0.52
RPAIN-201ENST00000327154 ISCA1Q9BUE6 129 aa18.32■□□□□ 0.52
RPAIN-201ENST00000327154 GJA3Q9Y6H8 435 aa18.32■□□□□ 0.52
RPAIN-201ENST00000327154 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
RPAIN-201ENST00000327154 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
RPAIN-201ENST00000327154 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
RPAIN-201ENST00000327154 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
RPAIN-201ENST00000327154 PPIP5K2O43314 1243 aa18.29■□□□□ 0.52
RPAIN-201ENST00000327154 GRAPQ13588 217 aa18.29■□□□□ 0.52
RPAIN-201ENST00000327154 AOC3Q16853 763 aa18.29■□□□□ 0.52
RPAIN-201ENST00000327154 PNMA8AQ86V59 439 aaPredicted RBP18.29■□□□□ 0.52
RPAIN-201ENST00000327154 NIM1KQ8IY84 436 aa18.29■□□□□ 0.52
RPAIN-201ENST00000327154 GRAPLQ8TC17 118 aaPredicted RBP18.29■□□□□ 0.52
RPAIN-201ENST00000327154 PHAXQ9H814 394 aaKnown RBP18.29■□□□□ 0.52
RPAIN-201ENST00000327154 CREBZFQ9NS37 354 aa18.29■□□□□ 0.52
RPAIN-201ENST00000327154 COL4A5P29400 1685 aa18.28■□□□□ 0.52
RPAIN-201ENST00000327154 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-201ENST00000327154 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-201ENST00000327154 DPP8Q6V1X1 898 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-201ENST00000327154 RIC3Q7Z5B4 369 aa18.28■□□□□ 0.52
RPAIN-201ENST00000327154 MPNDQ8N594 471 aa18.28■□□□□ 0.52
RPAIN-201ENST00000327154 SUPT20HQ8NEM7 779 aa18.28■□□□□ 0.52
RPAIN-201ENST00000327154 VPS33BQ9H267 617 aa18.28■□□□□ 0.52
RPAIN-201ENST00000327154 ITGBL1O95965 494 aaPredicted RBP18.27■□□□□ 0.52
RPAIN-201ENST00000327154 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
RPAIN-201ENST00000327154 TRIM28Q13263 835 aaKnown RBP18.27■□□□□ 0.52
RPAIN-201ENST00000327154 RTFDC1Q9BY42 306 aaPredicted RBP18.27■□□□□ 0.52
RPAIN-201ENST00000327154 PASKQ96RG2 1323 aa18.26■□□□□ 0.51
RPAIN-201ENST00000327154 LMOD1P29536 600 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms