RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ALKQ9UM73 1620 aa13.01□□□□□ -0.33
TOP3A-201ENST00000321105 CDK11BP21127 795 aaKnown RBP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 GCKRQ14397 625 aa13.01□□□□□ -0.33
TOP3A-201ENST00000321105 EAF2Q96CJ1 260 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 ARAP3Q8WWN8 1544 aa13.01□□□□□ -0.33
TOP3A-201ENST00000321105 SHROOM2Q13796 1616 aa13.01□□□□□ -0.33
TOP3A-201ENST00000321105 STX6O43752 255 aa13.01□□□□□ -0.33
TOP3A-201ENST00000321105 POLR3DP05423 398 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 PHKG2P15735 406 aa13.01□□□□□ -0.33
TOP3A-201ENST00000321105 SAFBQ15424 915 aaKnown RBP eCLIP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 IMMTQ16891 758 aaKnown RBP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 NIP7Q9Y221 180 aaKnown RBP eCLIP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 R3HCC1Q9Y3T6 440 aaKnown RBP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 KINO60870 393 aaKnown RBP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 RXRAP19793 462 aa13.01□□□□□ -0.33
TOP3A-201ENST00000321105 MICU3Q86XE3 530 aa13.01□□□□□ -0.33
TOP3A-201ENST00000321105 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
TOP3A-201ENST00000321105 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 ZNF335Q9H4Z2 1342 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-201ENST00000321105 ANKRD1Q15327 319 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 BEND3Q5T5X7 828 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 DZIP3Q86Y13 1208 aaKnown RBP13□□□□□ -0.33
TOP3A-201ENST00000321105 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 FAM13BQ9NYF5 915 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 NEK1Q96PY6 1258 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 SEC62Q99442 399 aaKnown RBP13□□□□□ -0.33
TOP3A-201ENST00000321105 TNMDQ9H2S6 317 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 ARHGEF10O15013 1369 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 ZPR1O75312 459 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 XRCC6P12956 609 aaKnown RBP eCLIP13□□□□□ -0.33
TOP3A-201ENST00000321105 RBM25P49756 843 aaKnown RBP13□□□□□ -0.33
TOP3A-201ENST00000321105 ATP2B3Q16720 1220 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 NAPBQ9H115 298 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 AKAP2Q9Y2D5 859 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 KIDINS220Q9ULH0 1771 aa13□□□□□ -0.33
TOP3A-201ENST00000321105 METTL22Q9BUU2 404 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-201ENST00000321105 TLR7Q9NYK1 1049 aaKnown RBP12.99□□□□□ -0.33
TOP3A-201ENST00000321105 ADGRB3O60242 1522 aa12.99□□□□□ -0.33
TOP3A-201ENST00000321105 ZNF213O14771 459 aa12.99□□□□□ -0.33
TOP3A-201ENST00000321105 SART3Q15020 963 aaKnown RBP12.99□□□□□ -0.33
TOP3A-201ENST00000321105 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
TOP3A-201ENST00000321105 ANKIB1Q9P2G1 1089 aa12.99□□□□□ -0.33
TOP3A-201ENST00000321105 SLC9C2Q5TAH2 1124 aa12.99□□□□□ -0.33
TOP3A-201ENST00000321105 ATP7BP35670 1465 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 DNM1Q05193 864 aaKnown RBP12.98□□□□□ -0.33
TOP3A-201ENST00000321105 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-201ENST00000321105 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-201ENST00000321105 TAF5LO75529 589 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 KRT32Q14532 448 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 ISM2Q6H9L7 571 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 GIMAP6Q6P9H5 292 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 ZSCAN31Q96LW9 406 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-201ENST00000321105 RANBP6O60518 1105 aaKnown RBP12.98□□□□□ -0.33
TOP3A-201ENST00000321105 TPM4P67936 248 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 AMOTL1Q8IY63 956 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 MIGA1Q8NAN2 632 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 NACAP1Q9BZK3 213 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 GNL3LQ9NVN8 582 aaKnown RBP12.98□□□□□ -0.33
TOP3A-201ENST00000321105 ERBB3P21860 1342 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 A0A1B0GUL7 405 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 NEURL1BA8MQ27 555 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 GOLGA8BA8MQT2 603 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 CREB3L3Q68CJ9 461 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 SNX21Q969T3 373 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 USP25Q9UHP3 1055 aa12.98□□□□□ -0.33
TOP3A-201ENST00000321105 FAM98CQ17RN3 349 aaKnown RBP12.97□□□□□ -0.33
TOP3A-201ENST00000321105 UBAC1Q9BSL1 405 aa12.97□□□□□ -0.33
TOP3A-201ENST00000321105 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
TOP3A-201ENST00000321105 CTNNA3Q9UI47 895 aa12.97□□□□□ -0.33
TOP3A-201ENST00000321105 Q6ZUG5 572 aa12.97□□□□□ -0.33
TOP3A-201ENST00000321105 PTH1RQ03431 593 aa12.96□□□□□ -0.33
TOP3A-201ENST00000321105 SSH3Q8TE77 659 aa12.96□□□□□ -0.33
TOP3A-201ENST00000321105 ESPNB1AK53 854 aa12.96□□□□□ -0.33
TOP3A-201ENST00000321105 FILIP1Q7Z7B0 1213 aa12.96□□□□□ -0.33
TOP3A-201ENST00000321105 CCAR2Q8N163 923 aaKnown RBP12.96□□□□□ -0.33
TOP3A-201ENST00000321105 USP48Q86UV5 1035 aa12.96□□□□□ -0.34
TOP3A-201ENST00000321105 BIN1O00499 593 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 IL15P40933 162 aaPredicted RBP12.95□□□□□ -0.34
TOP3A-201ENST00000321105 RAB3GAP1Q15042 981 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 SLFNL1Q499Z3 407 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 DIP2CQ9Y2E4 1556 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 PCDH11XQ9BZA7 1347 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 PCDH11YQ9BZA8 1340 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 CYP27B1O15528 508 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 SGSM2O43147 1006 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 APOBRQ0VD83 1088 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 MCMDC2Q4G0Z9 681 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 LRRC24Q50LG9 513 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 NUP62CLQ9H1M0 184 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 NCOA5Q9HCD5 579 aaKnown RBP12.95□□□□□ -0.34
TOP3A-201ENST00000321105 PTPRMP28827 1452 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 IFIT3O14879 490 aaKnown RBP12.95□□□□□ -0.34
TOP3A-201ENST00000321105 BRPF1P55201 1214 aaPredicted RBP12.95□□□□□ -0.34
TOP3A-201ENST00000321105 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
TOP3A-201ENST00000321105 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms