RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 BICDL1Q6ZP65 573 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 NEK1Q96PY6 1258 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 CFAP74Q9C0B2 1584 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 SBNO1A3KN83 1393 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 NOLC1Q14978 699 aaKnown RBP eCLIP18■□□□□ 0.47
GCFC2-201ENST00000321027 DACT1Q9NYF0 836 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
GCFC2-201ENST00000321027 EPS15P42566 896 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 HAND2P61296 217 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 CFAP100Q494V2 611 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 CCDC82Q8N4S0 544 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 SYT1P21579 422 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 UVSSAQ2YD98 709 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 FSIP1Q8NA03 581 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 PLXNC1O60486 1568 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 C8orf76Q96K31 380 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 EXOC5O00471 708 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 AK7Q96M32 723 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 ANO10Q9NW15 660 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 USP19O94966 1318 aa17.99■□□□□ 0.47
GCFC2-201ENST00000321027 LRRIQ1Q96JM4 1722 aa17.98■□□□□ 0.47
GCFC2-201ENST00000321027 SIRT1Q96EB6 747 aa17.98■□□□□ 0.47
GCFC2-201ENST00000321027 LMBRD1Q9NUN5 540 aa17.98■□□□□ 0.47
GCFC2-201ENST00000321027 SFPQP23246 707 aaKnown RBP eCLIP17.98■□□□□ 0.47
GCFC2-201ENST00000321027 ZCRB1Q8TBF4 217 aaKnown RBP17.98■□□□□ 0.47
GCFC2-201ENST00000321027 INTS4Q96HW7 963 aaKnown RBP17.98■□□□□ 0.47
GCFC2-201ENST00000321027 KSR2Q6VAB6 950 aa17.98■□□□□ 0.47
GCFC2-201ENST00000321027 CCDC69A6NI79 296 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 POLR3DP05423 398 aaPredicted RBP17.97■□□□□ 0.47
GCFC2-201ENST00000321027 SKIDA1Q1XH10 827 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 IFIT5Q13325 482 aaKnown RBP17.97■□□□□ 0.47
GCFC2-201ENST00000321027 CCDC186Q7Z3E2 898 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 IQGAP3Q86VI3 1631 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 GRM8O00222 908 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 AEBP2Q6ZN18 517 aaPredicted RBP17.97■□□□□ 0.47
GCFC2-201ENST00000321027 ZMYND15Q9H091 742 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 DYNC1I1O14576 645 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 TXLNAP40222 546 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 ISM2Q6H9L7 571 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 UBE2Q2Q8WVN8 375 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 TRMT112Q9UI30 125 aaKnown RBP17.97■□□□□ 0.47
GCFC2-201ENST00000321027 HECW2Q9P2P5 1572 aa17.97■□□□□ 0.47
GCFC2-201ENST00000321027 SPDYE4A6NLX3 237 aa17.96■□□□□ 0.47
GCFC2-201ENST00000321027 NMIQ13287 307 aaPredicted RBP17.96■□□□□ 0.47
GCFC2-201ENST00000321027 GNL3LQ9NVN8 582 aaKnown RBP17.96■□□□□ 0.47
GCFC2-201ENST00000321027 ANO6Q4KMQ2 910 aa17.96■□□□□ 0.47
GCFC2-201ENST00000321027 ZFYVE27Q5T4F4 411 aa17.96■□□□□ 0.47
GCFC2-201ENST00000321027 FAM173BQ6P4H8 233 aa17.96■□□□□ 0.47
GCFC2-201ENST00000321027 ABCC4O15439 1325 aa17.96■□□□□ 0.47
GCFC2-201ENST00000321027 LGR6Q9HBX8 967 aa17.96■□□□□ 0.47
GCFC2-201ENST00000321027 TMEM63CQ9P1W3 806 aa17.95■□□□□ 0.46
GCFC2-201ENST00000321027 SMARCE1Q969G3 411 aa17.95■□□□□ 0.46
GCFC2-201ENST00000321027 TDO2P48775 406 aa17.95■□□□□ 0.46
GCFC2-201ENST00000321027 CCAR1Q8IX12 1150 aaKnown RBP17.95■□□□□ 0.46
GCFC2-201ENST00000321027 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
GCFC2-201ENST00000321027 NACAP1Q9BZK3 213 aa17.95■□□□□ 0.46
GCFC2-201ENST00000321027 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.95■□□□□ 0.46
GCFC2-201ENST00000321027 GOLGA8BA8MQT2 603 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 CCP110O43303 1012 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 PPP4R3BQ5MIZ7 849 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 FAM200AQ8TCP9 573 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 PIBF1Q8WXW3 757 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 ABCC3O15438 1527 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 RNMTO43148 476 aaKnown RBP17.94■□□□□ 0.46
GCFC2-201ENST00000321027 ALDH1L1O75891 902 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 HMGB1P09429 215 aaKnown RBP17.94■□□□□ 0.46
GCFC2-201ENST00000321027 NBPF6Q5VWK0 638 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 ZSCAN25Q6NSZ9 544 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 NBPF4Q96M43 638 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 AKAP2Q9Y2D5 859 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 CDC42BPBQ9Y5S2 1711 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 GADD45BO75293 160 aaPredicted RBP17.94■□□□□ 0.46
GCFC2-201ENST00000321027 CDKL5O76039 1030 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 LINS1Q8NG48 757 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 AIDAQ96BJ3 306 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 DNAJC25Q9H1X3 360 aa17.94■□□□□ 0.46
GCFC2-201ENST00000321027 SYNMO15061 1565 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 KIF18AQ8NI77 898 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 EFCAB6Q5THR3 1501 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 TET3O43151 1660 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 ZNF445P59923 1031 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 CDK5RAP3Q96JB5 506 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 ABCF2Q9UG63 623 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 IGHMBP2P38935 993 aaKnown RBP17.93■□□□□ 0.46
GCFC2-201ENST00000321027 CDR1P51861 262 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 ATP2B2Q01814 1243 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 HS1BP3Q53T59 392 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 MAGEC2Q9UBF1 373 aaPredicted RBP17.93■□□□□ 0.46
GCFC2-201ENST00000321027 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
GCFC2-201ENST00000321027 SMTNL1A8MU46 457 aa17.92■□□□□ 0.46
GCFC2-201ENST00000321027 NBPF7P0C2Y1 421 aaPredicted RBP17.92■□□□□ 0.46
GCFC2-201ENST00000321027 AXDND1Q5T1B0 1012 aaPredicted RBP17.92■□□□□ 0.46
GCFC2-201ENST00000321027 CREB3L3Q68CJ9 461 aa17.92■□□□□ 0.46
GCFC2-201ENST00000321027 PPFIBP1Q86W92 1011 aa17.92■□□□□ 0.46
GCFC2-201ENST00000321027 UBXN4Q92575 508 aa17.92■□□□□ 0.46
GCFC2-201ENST00000321027 FBXO3Q9UK99 471 aa17.92■□□□□ 0.46
GCFC2-201ENST00000321027 USP16Q9Y5T5 823 aa17.92■□□□□ 0.46
GCFC2-201ENST00000321027 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
GCFC2-201ENST00000321027 HMG20BQ9P0W2 317 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms