RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZSWIM4Q9H7M6 989 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 PALD1Q9ULE6 856 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 ADGRL2O95490 1459 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 SFPQP23246 707 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLIP4-201ENST00000320081 CCDC186Q7Z3E2 898 aa19.25■□□□□ 0.67
CLIP4-201ENST00000320081 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
CLIP4-201ENST00000320081 FILIP1LQ4L180 1135 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 MBD5Q9P267 1494 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 SHANK2Q9UPX8 1470 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 TNNT1P13805 278 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 APOBRQ0VD83 1088 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 LINS1Q8NG48 757 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 ZNF219Q9P2Y4 722 aaPredicted RBP19.24■□□□□ 0.67
CLIP4-201ENST00000320081 ANO6Q4KMQ2 910 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 PPFIBP1Q86W92 1011 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 PDCL2Q8N4E4 241 aa19.24■□□□□ 0.67
CLIP4-201ENST00000320081 ZNF594Q96JF6 807 aaPredicted RBP19.24■□□□□ 0.67
CLIP4-201ENST00000320081 GPS2Q13227 327 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 ENOX2Q16206 610 aaKnown RBP19.23■□□□□ 0.67
CLIP4-201ENST00000320081 CDK5RAP3Q96JB5 506 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 IGSF3O75054 1194 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 GADD45BO75293 160 aaPredicted RBP19.23■□□□□ 0.67
CLIP4-201ENST00000320081 RBM25P49756 843 aaKnown RBP19.23■□□□□ 0.67
CLIP4-201ENST00000320081 DNA2P51530 1060 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 F13A1P00488 732 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 RBM5P52756 815 aaKnown RBP eCLIP19.23■□□□□ 0.67
CLIP4-201ENST00000320081 ZSCAN25Q6NSZ9 544 aa19.23■□□□□ 0.67
CLIP4-201ENST00000320081 GOLGA8AA7E2F4 631 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 LTKP29376 864 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 PTPN14Q15678 1187 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 OTUD7BQ6GQQ9 843 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 ZSCAN29Q8IWY8 852 aaPredicted RBP19.22■□□□□ 0.67
CLIP4-201ENST00000320081 ERCC4Q92889 916 aaPredicted RBP19.22■□□□□ 0.67
CLIP4-201ENST00000320081 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 URI1O94763 535 aaPredicted RBP19.22■□□□□ 0.67
CLIP4-201ENST00000320081 CREB3L3Q68CJ9 461 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 TANGO6Q9C0B7 1094 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 SLC12A7Q9Y666 1083 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 TXLNAP40222 546 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 EPS15P42566 896 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 FAM89AQ96GI7 184 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 NCOA5Q9HCD5 579 aaKnown RBP19.22■□□□□ 0.67
CLIP4-201ENST00000320081 SLC26A6Q9BXS9 759 aa19.22■□□□□ 0.67
CLIP4-201ENST00000320081 SAMD9Q5K651 1589 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 AKAP4Q5JQC9 854 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 TMC6Q7Z403 805 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 CCDC43Q96MW1 224 aaKnown RBP19.21■□□□□ 0.67
CLIP4-201ENST00000320081 DBNDD2Q9BQY9 259 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 ZNF521Q96K83 1311 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 HSP90B2PQ58FF3 399 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 LUZP1Q86V48 1076 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 ANKRD18BA2A2Z9 1011 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 KRT18P05783 430 aaKnown RBP19.21■□□□□ 0.67
CLIP4-201ENST00000320081 TMEM67Q5HYA8 995 aa19.21■□□□□ 0.67
CLIP4-201ENST00000320081 CDKL5O76039 1030 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 SLC3A2P08195 630 aaKnown RBP19.2■□□□□ 0.66
CLIP4-201ENST00000320081 DHX37Q8IY37 1157 aaKnown RBP19.2■□□□□ 0.66
CLIP4-201ENST00000320081 TRERF1Q96PN7 1200 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 CLCN1P35523 988 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 VAT1LQ9HCJ6 419 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 SLC9C2Q5TAH2 1124 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 CCDC70Q6NSX1 233 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 GAS2L3Q86XJ1 694 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 IL17REQ8NFR9 667 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 ANO10Q9NW15 660 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 CTDP1Q9Y5B0 961 aaPredicted RBP19.2■□□□□ 0.66
CLIP4-201ENST00000320081 MAP3K12Q12852 859 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 CNNM3Q8NE01 707 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 MAP7D2Q96T17 732 aa19.2■□□□□ 0.66
CLIP4-201ENST00000320081 A1BGP04217 495 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 TEX35Q5T0J7 233 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 TTC21AQ8NDW8 1320 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 FAM193AP78312 1265 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
CLIP4-201ENST00000320081 IARSP41252 1262 aaKnown RBP19.18■□□□□ 0.66
CLIP4-201ENST00000320081 WWC3Q9ULE0 1092 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 MIGA1Q8NAN2 632 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 NPC1L1Q9UHC9 1359 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 LMOD1P29536 600 aaPredicted RBP19.18■□□□□ 0.66
CLIP4-201ENST00000320081 TRMT2AQ8IZ69 625 aaKnown RBP19.18■□□□□ 0.66
CLIP4-201ENST00000320081 USP44Q9H0E7 712 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 ANKIB1Q9P2G1 1089 aa19.18■□□□□ 0.66
CLIP4-201ENST00000320081 MAGEC2Q9UBF1 373 aaPredicted RBP19.18■□□□□ 0.66
CLIP4-201ENST00000320081 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 EXOC5O00471 708 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 ZKSCAN3Q9BRR0 538 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 MKNK2Q9HBH9 465 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 ZCRB1Q8TBF4 217 aaKnown RBP19.17■□□□□ 0.66
CLIP4-201ENST00000320081 TSC1Q92574 1164 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 RNF216Q9NWF9 866 aaPredicted RBP19.17■□□□□ 0.66
CLIP4-201ENST00000320081 ZHX1Q9UKY1 873 aaPredicted RBP19.17■□□□□ 0.66
CLIP4-201ENST00000320081 METAP2P50579 478 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLIP4-201ENST00000320081 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 MAP3K5Q99683 1374 aa19.17■□□□□ 0.66
CLIP4-201ENST00000320081 PLA2R1Q13018 1463 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms