RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 DDX21Q9NR30 783 aaKnown RBP eCLIP24.9■■□□□ 1.58
CPNE7-202ENST00000319518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.9■■□□□ 1.58
CPNE7-202ENST00000319518 PHF14O94880 888 aa24.89■■□□□ 1.58
CPNE7-202ENST00000319518 C9orf78Q9NZ63 289 aaPredicted RBP24.89■■□□□ 1.58
CPNE7-202ENST00000319518 F13A1P00488 732 aa24.88■■□□□ 1.57
CPNE7-202ENST00000319518 ST3GAL1Q11201 340 aa24.88■■□□□ 1.57
CPNE7-202ENST00000319518 OS9Q13438 667 aaPredicted RBP24.88■■□□□ 1.57
CPNE7-202ENST00000319518 USP16Q9Y5T5 823 aa24.88■■□□□ 1.57
CPNE7-202ENST00000319518 TOM1L2Q6ZVM7 507 aa24.88■■□□□ 1.57
CPNE7-202ENST00000319518 DCAF5Q96JK2 942 aa24.88■■□□□ 1.57
CPNE7-202ENST00000319518 SOS2Q07890 1332 aaPredicted RBP24.88■■□□□ 1.57
CPNE7-202ENST00000319518 TPRNQ4KMQ1 711 aa24.87■■□□□ 1.57
CPNE7-202ENST00000319518 CCDC183Q5T5S1 534 aa24.87■■□□□ 1.57
CPNE7-202ENST00000319518 DIAPH3Q9NSV4 1193 aa24.87■■□□□ 1.57
CPNE7-202ENST00000319518 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.87■■□□□ 1.57
CPNE7-202ENST00000319518 SMC3Q9UQE7 1217 aa24.87■■□□□ 1.57
CPNE7-202ENST00000319518 COL9A3Q14050 684 aaPredicted RBP24.86■■□□□ 1.57
CPNE7-202ENST00000319518 PRPF40BQ6NWY9 871 aaKnown RBP24.86■■□□□ 1.57
CPNE7-202ENST00000319518 CLASRPQ8N2M8 674 aaKnown RBP24.86■■□□□ 1.57
CPNE7-202ENST00000319518 KCNB2Q92953 911 aa24.86■■□□□ 1.57
CPNE7-202ENST00000319518 ECHDC1Q9NTX5 307 aa24.86■■□□□ 1.57
CPNE7-202ENST00000319518 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.86■■□□□ 1.57
CPNE7-202ENST00000319518 CCDC83Q8IWF9 413 aa24.86■■□□□ 1.57
CPNE7-202ENST00000319518 UBE2HP62256 183 aa24.85■■□□□ 1.57
CPNE7-202ENST00000319518 JAKMIP1Q96N16 626 aaKnown RBP24.85■■□□□ 1.57
CPNE7-202ENST00000319518 DDX54Q8TDD1 881 aaKnown RBP24.85■■□□□ 1.57
CPNE7-202ENST00000319518 XAGE3Q8WTP9 111 aa24.85■■□□□ 1.57
CPNE7-202ENST00000319518 FIBPO43427 364 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 GJB2P29033 226 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 CABP4P57796 275 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 TTC5Q8N0Z6 440 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 ZSWIM6Q9HCJ5 1215 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 STRN4Q9NRL3 753 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 MTMR6Q9Y217 621 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 WDR17Q8IZU2 1322 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 NECTIN1Q15223 517 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 VPS53Q5VIR6 699 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 RIC3Q7Z5B4 369 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 MPNDQ8N594 471 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 KAZALD1Q96I82 304 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 USP25Q9UHP3 1055 aa24.84■■□□□ 1.57
CPNE7-202ENST00000319518 PKD1L3Q7Z443 1732 aa24.83■■□□□ 1.57
CPNE7-202ENST00000319518 ALDH1L1O75891 902 aa24.83■■□□□ 1.57
CPNE7-202ENST00000319518 COPS6Q7L5N1 327 aa24.83■■□□□ 1.57
CPNE7-202ENST00000319518 PDRG1Q9NUG6 133 aa24.83■■□□□ 1.57
CPNE7-202ENST00000319518 IGKV5-2P06315 115 aa24.83■■□□□ 1.56
CPNE7-202ENST00000319518 HCLS1P14317 486 aaPredicted RBP24.83■■□□□ 1.56
CPNE7-202ENST00000319518 FAM184AQ8NB25 1140 aa24.83■■□□□ 1.56
CPNE7-202ENST00000319518 ABCC6O95255 1503 aa24.82■■□□□ 1.56
CPNE7-202ENST00000319518 UVSSAQ2YD98 709 aa24.82■■□□□ 1.56
CPNE7-202ENST00000319518 LINS1Q8NG48 757 aa24.82■■□□□ 1.56
CPNE7-202ENST00000319518 RUFY2Q8WXA3 655 aa24.82■■□□□ 1.56
CPNE7-202ENST00000319518 SUCLG2Q96I99 432 aa24.82■■□□□ 1.56
CPNE7-202ENST00000319518 DDX58O95786 925 aaKnown RBP24.82■■□□□ 1.56
CPNE7-202ENST00000319518 PTMAP06454 111 aaKnown RBP24.82■■□□□ 1.56
CPNE7-202ENST00000319518 RBM10P98175 930 aaKnown RBP24.82■■□□□ 1.56
CPNE7-202ENST00000319518 DNM1Q05193 864 aaKnown RBP24.82■■□□□ 1.56
CPNE7-202ENST00000319518 ME3Q16798 604 aa24.82■■□□□ 1.56
CPNE7-202ENST00000319518 CSPP1Q1MSJ5 1256 aa24.82■■□□□ 1.56
CPNE7-202ENST00000319518 FUCA2Q9BTY2 467 aa24.82■■□□□ 1.56
CPNE7-202ENST00000319518 FAM227BQ96M60 508 aa24.81■■□□□ 1.56
CPNE7-202ENST00000319518 TM6SF1Q9BZW5 370 aa24.81■■□□□ 1.56
CPNE7-202ENST00000319518 UQCRHLA0A096LP55 91 aa24.81■■□□□ 1.56
CPNE7-202ENST00000319518 SASH1O94885 1247 aa24.81■■□□□ 1.56
CPNE7-202ENST00000319518 UQCRHP07919 91 aa24.81■■□□□ 1.56
CPNE7-202ENST00000319518 IFIT2P09913 472 aaKnown RBP24.81■■□□□ 1.56
CPNE7-202ENST00000319518 AACSQ86V21 672 aa24.81■■□□□ 1.56
CPNE7-202ENST00000319518 PDCL3Q9H2J4 239 aa24.81■■□□□ 1.56
CPNE7-202ENST00000319518 CCDC171Q6TFL3 1326 aa24.81■■□□□ 1.56
CPNE7-202ENST00000319518 COL5A2P05997 1499 aaPredicted RBP24.8■■□□□ 1.56
CPNE7-202ENST00000319518 MRC1P22897 1456 aa24.8■■□□□ 1.56
CPNE7-202ENST00000319518 GRM8O00222 908 aa24.8■■□□□ 1.56
CPNE7-202ENST00000319518 SNRPA1P09661 255 aaKnown RBP24.8■■□□□ 1.56
CPNE7-202ENST00000319518 JARID2Q92833 1246 aaPredicted RBP24.8■■□□□ 1.56
CPNE7-202ENST00000319518 LARP1Q6PKG0 1096 aaKnown RBP24.8■■□□□ 1.56
CPNE7-202ENST00000319518 EVI5LQ96CN4 794 aa24.8■■□□□ 1.56
CPNE7-202ENST00000319518 ZNF830Q96NB3 372 aaPredicted RBP24.8■■□□□ 1.56
CPNE7-202ENST00000319518 CYP46A1Q9Y6A2 500 aa24.8■■□□□ 1.56
CPNE7-202ENST00000319518 NECAB1Q8N987 351 aa24.79■■□□□ 1.56
CPNE7-202ENST00000319518 ZCRB1Q8TBF4 217 aaKnown RBP24.79■■□□□ 1.56
CPNE7-202ENST00000319518 EAF2Q96CJ1 260 aaPredicted RBP24.79■■□□□ 1.56
CPNE7-202ENST00000319518 FMNL2Q96PY5 1086 aa24.79■■□□□ 1.56
CPNE7-202ENST00000319518 LRP10Q7Z4F1 713 aa24.78■■□□□ 1.56
CPNE7-202ENST00000319518 MYD88Q99836 296 aa24.78■■□□□ 1.56
CPNE7-202ENST00000319518 BICC1Q9H694 974 aaKnown RBP24.78■■□□□ 1.56
CPNE7-202ENST00000319518 TLR7Q9NYK1 1049 aaKnown RBP24.78■■□□□ 1.56
CPNE7-202ENST00000319518 RBM8AQ9Y5S9 174 aaKnown RBP24.78■■□□□ 1.56
CPNE7-202ENST00000319518 ADCY5O95622 1261 aa24.78■■□□□ 1.56
CPNE7-202ENST00000319518 GIMAP6Q6P9H5 292 aa24.78■■□□□ 1.56
CPNE7-202ENST00000319518 TPCN1Q9ULQ1 816 aa24.78■■□□□ 1.56
CPNE7-202ENST00000319518 CREB3L3Q68CJ9 461 aa24.77■■□□□ 1.56
CPNE7-202ENST00000319518 ERC1Q8IUD2 1116 aa24.77■■□□□ 1.56
CPNE7-202ENST00000319518 ATP6V1DQ9Y5K8 247 aa24.77■■□□□ 1.56
CPNE7-202ENST00000319518 NMIQ13287 307 aaPredicted RBP24.77■■□□□ 1.56
CPNE7-202ENST00000319518 GLIPR1L2Q4G1C9 344 aa24.77■■□□□ 1.56
CPNE7-202ENST00000319518 MAP4K1Q92918 833 aa24.77■■□□□ 1.56
CPNE7-202ENST00000319518 SH2B1Q9NRF2 756 aaPredicted RBP24.77■■□□□ 1.56
CPNE7-202ENST00000319518 LETM1O95202 739 aaPredicted RBP24.76■■□□□ 1.55
CPNE7-202ENST00000319518 KIAA2012Q0VF49 1180 aa24.76■■□□□ 1.55
CPNE7-202ENST00000319518 GPATCH3Q96I76 525 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms