RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 AFMP43652 599 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 CEBPAP49715 358 aaPredicted RBP24.07■■□□□ 1.44
KDM3B-201ENST00000314358 CALML4Q96GE6 196 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 DNAI2Q9GZS0 605 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 TMEM67Q5HYA8 995 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 USP16Q9Y5T5 823 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 MXRA7P84157 204 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 TBC1D2Q9BYX2 928 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 ZBTB3Q9H5J0 574 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 NSD3Q9BZ95 1437 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 LIMCH1Q9UPQ0 1083 aa24.07■■□□□ 1.44
KDM3B-201ENST00000314358 CALCOCO1Q9P1Z2 691 aa24.06■■□□□ 1.44
KDM3B-201ENST00000314358 TMEM110-MUSTN1A8MSY1 372 aa24.06■■□□□ 1.44
KDM3B-201ENST00000314358 SLC5A1P13866 664 aa24.06■■□□□ 1.44
KDM3B-201ENST00000314358 PTGS1P23219 599 aa24.06■■□□□ 1.44
KDM3B-201ENST00000314358 NAA15Q9BXJ9 866 aaKnown RBP24.06■■□□□ 1.44
KDM3B-201ENST00000314358 STX1AQ16623 288 aa24.06■■□□□ 1.44
KDM3B-201ENST00000314358 LRRC2Q9BYS8 371 aa24.06■■□□□ 1.44
KDM3B-201ENST00000314358 FEZ1Q99689 392 aa24.06■■□□□ 1.44
KDM3B-201ENST00000314358 CCDC160A6NGH7 325 aa24.05■■□□□ 1.44
KDM3B-201ENST00000314358 CAMSAP2Q08AD1 1489 aa24.05■■□□□ 1.44
KDM3B-201ENST00000314358 FERP16591 822 aa24.05■■□□□ 1.44
KDM3B-201ENST00000314358 BAG4O95429 457 aaKnown RBP24.05■■□□□ 1.44
KDM3B-201ENST00000314358 FBF1Q8TES7 1133 aa24.05■■□□□ 1.44
KDM3B-201ENST00000314358 C6orf229H3BNL8 230 aa24.05■■□□□ 1.44
KDM3B-201ENST00000314358 PHAXQ9H814 394 aaKnown RBP24.05■■□□□ 1.44
KDM3B-201ENST00000314358 ATP5J2-PTCD1G3V325 749 aa24.04■■□□□ 1.44
KDM3B-201ENST00000314358 RPGRQ92834 1020 aaKnown RBP24.04■■□□□ 1.44
KDM3B-201ENST00000314358 DPH6Q7L8W6 267 aa24.04■■□□□ 1.44
KDM3B-201ENST00000314358 NECAB1Q8N987 351 aa24.04■■□□□ 1.44
KDM3B-201ENST00000314358 FCHSD2O94868 740 aa24.04■■□□□ 1.44
KDM3B-201ENST00000314358 SH2B1Q9NRF2 756 aaPredicted RBP24.04■■□□□ 1.44
KDM3B-201ENST00000314358 ZNF652Q9Y2D9 606 aa24.04■■□□□ 1.44
KDM3B-201ENST00000314358 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.04■■□□□ 1.44
KDM3B-201ENST00000314358 V9GYY5 206 aaPredicted RBP24.04■■□□□ 1.44
KDM3B-201ENST00000314358 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
KDM3B-201ENST00000314358 HSF2BPO75031 334 aa24.03■■□□□ 1.44
KDM3B-201ENST00000314358 IKBKGQ9Y6K9 419 aa24.03■■□□□ 1.44
KDM3B-201ENST00000314358 A0A087WZG4 1122 aa24.03■■□□□ 1.44
KDM3B-201ENST00000314358 MNAT1P51948 309 aa24.03■■□□□ 1.44
KDM3B-201ENST00000314358 GIGYF2Q6Y7W6 1299 aaKnown RBP24.03■■□□□ 1.44
KDM3B-201ENST00000314358 CEP112Q8N8E3 955 aa24.03■■□□□ 1.44
KDM3B-201ENST00000314358 KIF20AO95235 890 aa24.03■■□□□ 1.44
KDM3B-201ENST00000314358 TCP11L1Q9NUJ3 509 aa24.03■■□□□ 1.44
KDM3B-201ENST00000314358 CUL7Q14999 1698 aa24.03■■□□□ 1.44
KDM3B-201ENST00000314358 MRPS9P82933 396 aaKnown RBP24.03■■□□□ 1.44
KDM3B-201ENST00000314358 TSPY2A6NKD2 308 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 TRIM47Q96LD4 638 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 KIF14Q15058 1648 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 SMIM23A6NLE4 172 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 TSNARE1Q96NA8 513 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 ARID5AQ03989 594 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 STX6O43752 255 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 SPECC1LQ69YQ0 1117 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 OTUD6BQ8N6M0 293 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 ADGRL1O94910 1474 aa24.02■■□□□ 1.44
KDM3B-201ENST00000314358 PLB1Q6P1J6 1458 aa24.01■■□□□ 1.43
KDM3B-201ENST00000314358 SYNCQ9H7C4 482 aa24.01■■□□□ 1.43
KDM3B-201ENST00000314358 CETN1Q12798 172 aa24.01■■□□□ 1.43
KDM3B-201ENST00000314358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.01■■□□□ 1.434e-7■■□□□ 12.6
KDM3B-201ENST00000314358 HCLS1P14317 486 aaPredicted RBP24.01■■□□□ 1.43
KDM3B-201ENST00000314358 PABPN1LA6NDY0 278 aaKnown RBP24.01■■□□□ 1.43
KDM3B-201ENST00000314358 IARSP41252 1262 aaKnown RBP24.01■■□□□ 1.43
KDM3B-201ENST00000314358 ZNF165P49910 485 aa24.01■■□□□ 1.43
KDM3B-201ENST00000314358 NGLY1Q96IV0 654 aa24.01■■□□□ 1.43
KDM3B-201ENST00000314358 CTAGE5O15320 804 aa24■■□□□ 1.43
KDM3B-201ENST00000314358 TCEANC2Q96MN5 208 aa24■■□□□ 1.43
KDM3B-201ENST00000314358 ORC3Q9UBD5 711 aaPredicted RBP24■■□□□ 1.43
KDM3B-201ENST00000314358 RSPH14Q9UHP6 348 aa24■■□□□ 1.43
KDM3B-201ENST00000314358 ANKRD18BA2A2Z9 1011 aa24■■□□□ 1.43
KDM3B-201ENST00000314358 MCM6Q14566 821 aa24■■□□□ 1.43
KDM3B-201ENST00000314358 KAT14Q9H8E8 782 aa24■■□□□ 1.43
KDM3B-201ENST00000314358 N4BP3O15049 544 aa24■■□□□ 1.43
KDM3B-201ENST00000314358 METAP2P50579 478 aaKnown RBP eCLIP24■■□□□ 1.436e-6■□□□□ 10.3
KDM3B-201ENST00000314358 KIAA0753Q2KHM9 967 aa23.99■■□□□ 1.43
KDM3B-201ENST00000314358 UBA7P41226 1012 aa23.99■■□□□ 1.43
KDM3B-201ENST00000314358 GRM1Q13255 1194 aa23.99■■□□□ 1.43
KDM3B-201ENST00000314358 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
KDM3B-201ENST00000314358 MAP3K2Q9Y2U5 619 aa23.99■■□□□ 1.43
KDM3B-201ENST00000314358 AKNAD1Q5T1N1 836 aa23.99■■□□□ 1.43
KDM3B-201ENST00000314358 CCDC6Q16204 474 aa23.98■■□□□ 1.43
KDM3B-201ENST00000314358 RRAGBQ5VZM2 374 aa23.98■■□□□ 1.43
KDM3B-201ENST00000314358 HMGB1P09429 215 aaKnown RBP23.98■■□□□ 1.43
KDM3B-201ENST00000314358 CCDC61Q9Y6R9 512 aa23.98■■□□□ 1.43
KDM3B-201ENST00000314358 RARSP54136 660 aaKnown RBP23.98■■□□□ 1.43
KDM3B-201ENST00000314358 C6orf163Q5TEZ5 329 aa23.98■■□□□ 1.43
KDM3B-201ENST00000314358 EXOC1Q9NV70 894 aa23.98■■□□□ 1.43
KDM3B-201ENST00000314358 WWC3Q9ULE0 1092 aa23.98■■□□□ 1.43
KDM3B-201ENST00000314358 CCDC63Q8NA47 563 aa23.98■■□□□ 1.43
KDM3B-201ENST00000314358 TBC1D9Q6ZT07 1266 aa23.97■■□□□ 1.43
KDM3B-201ENST00000314358 KCNH5Q8NCM2 988 aa23.97■■□□□ 1.43
KDM3B-201ENST00000314358 BMS1Q14692 1282 aaKnown RBP23.97■■□□□ 1.43
KDM3B-201ENST00000314358 DDX19AQ9NUU7 478 aaKnown RBP23.97■■□□□ 1.43
KDM3B-201ENST00000314358 IQSEC3Q9UPP2 1182 aaPredicted RBP23.97■■□□□ 1.43
KDM3B-201ENST00000314358 KRT13P13646 458 aa23.97■■□□□ 1.43
KDM3B-201ENST00000314358 GSDMDP57764 484 aa23.97■■□□□ 1.43
KDM3B-201ENST00000314358 NAIPQ13075 1403 aa23.97■■□□□ 1.43
KDM3B-201ENST00000314358 AMPD3Q01432 767 aa23.97■■□□□ 1.43
KDM3B-201ENST00000314358 NME9Q86XW9 330 aa23.97■■□□□ 1.43
KDM3B-201ENST00000314358 CAPZA3Q96KX2 299 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms