RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SDF4Q9BRK5 362 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 ARHGEF40Q8TER5 1519 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 UQCRFS1P1P0C7P4 283 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 CEBPZQ03701 1054 aaKnown RBP16.19■□□□□ 0.18
DDX54-202ENST00000314045 CAVIN1Q6NZI2 390 aaKnown RBP16.19■□□□□ 0.18
DDX54-202ENST00000314045 ABCC4O15439 1325 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 ZNF853P0CG23 659 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 CCDC83Q8IWF9 413 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 PNMA6EA0A0J9YXQ4 647 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 GCKRQ14397 625 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 ESYT1Q9BSJ8 1104 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 ZNF213O14771 459 aa16.18■□□□□ 0.18
DDX54-202ENST00000314045 KDM2BQ8NHM5 1336 aa16.18■□□□□ 0.18
DDX54-202ENST00000314045 GNPATO15228 680 aa16.18■□□□□ 0.18
DDX54-202ENST00000314045 TPD52L1Q16890 204 aaPredicted RBP16.18■□□□□ 0.18
DDX54-202ENST00000314045 HELBQ8NG08 1087 aaPredicted RBP16.18■□□□□ 0.18
DDX54-202ENST00000314045 DDX11Q96FC9 970 aa16.18■□□□□ 0.18
DDX54-202ENST00000314045 ZSCAN29Q8IWY8 852 aaPredicted RBP16.18■□□□□ 0.18
DDX54-202ENST00000314045 OTUD7AQ8TE49 926 aaPredicted RBP16.18■□□□□ 0.18
DDX54-202ENST00000314045 USP44Q9H0E7 712 aa16.18■□□□□ 0.18
DDX54-202ENST00000314045 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
DDX54-202ENST00000314045 TTC41PQ6P2S7 1318 aa16.18■□□□□ 0.18
DDX54-202ENST00000314045 TFCP2Q12800 502 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 SASS6Q6UVJ0 657 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 KLHDC4Q8TBB5 520 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 CCNL1Q9UK58 526 aaPredicted RBP16.17■□□□□ 0.18
DDX54-202ENST00000314045 TULP4Q9NRJ4 1543 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 USP5P45974 858 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 HOOK1Q9UJC3 728 aaKnown RBP16.17■□□□□ 0.18
DDX54-202ENST00000314045 IQSEC3Q9UPP2 1182 aaPredicted RBP16.17■□□□□ 0.18
DDX54-202ENST00000314045 LIMCH1Q9UPQ0 1083 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 PTPRMP28827 1452 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 ADAMTS13Q76LX8 1427 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 MCM4P33991 863 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 STK38Q15208 465 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 SUCLG2Q96I99 432 aa16.17■□□□□ 0.18
DDX54-202ENST00000314045 ZNF396Q96N95 335 aaPredicted RBP16.17■□□□□ 0.18
DDX54-202ENST00000314045 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
DDX54-202ENST00000314045 PRKCSHP14314 528 aaPredicted RBP16.16■□□□□ 0.18
DDX54-202ENST00000314045 SH3TC1Q8TE82 1336 aa16.16■□□□□ 0.18
DDX54-202ENST00000314045 HMGB1P09429 215 aaKnown RBP16.16■□□□□ 0.18
DDX54-202ENST00000314045 KRT85P78386 507 aa16.16■□□□□ 0.18
DDX54-202ENST00000314045 ST5P78524 1137 aa16.16■□□□□ 0.18
DDX54-202ENST00000314045 PES1O00541 588 aaKnown RBP16.15■□□□□ 0.18
DDX54-202ENST00000314045 CDKL5O76039 1030 aa16.15■□□□□ 0.18
DDX54-202ENST00000314045 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
DDX54-202ENST00000314045 SH2B1Q9NRF2 756 aaPredicted RBP16.15■□□□□ 0.18
DDX54-202ENST00000314045 CCDC87Q9NVE4 849 aa16.15■□□□□ 0.18
DDX54-202ENST00000314045 AXIN2Q9Y2T1 843 aa16.15■□□□□ 0.18
DDX54-202ENST00000314045 TFCP2L1Q9NZI6 479 aa16.15■□□□□ 0.18
DDX54-202ENST00000314045 QRICH2Q9H0J4 1663 aa16.15■□□□□ 0.18
DDX54-202ENST00000314045 PIK3C2BO00750 1634 aa16.15■□□□□ 0.18
DDX54-202ENST00000314045 HAND2P61296 217 aa16.15■□□□□ 0.18
DDX54-202ENST00000314045 ZFYP08048 801 aaPredicted RBP16.14■□□□□ 0.17
DDX54-202ENST00000314045 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
DDX54-202ENST00000314045 TIMM10P62072 90 aa16.14■□□□□ 0.17
DDX54-202ENST00000314045 FERMT3Q86UX7 667 aa16.14■□□□□ 0.17
DDX54-202ENST00000314045 EYA2O00167 538 aa16.14■□□□□ 0.17
DDX54-202ENST00000314045 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
DDX54-202ENST00000314045 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
DDX54-202ENST00000314045 ZNF622Q969S3 477 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■□□□ 13.1
DDX54-202ENST00000314045 ANO8Q9HCE9 1232 aaPredicted RBP16.13■□□□□ 0.17
DDX54-202ENST00000314045 KINO60870 393 aaKnown RBP16.13■□□□□ 0.17
DDX54-202ENST00000314045 SEC24BO95487 1268 aa16.13■□□□□ 0.17
DDX54-202ENST00000314045 TRAPPC3LQ5T215 181 aa16.13■□□□□ 0.17
DDX54-202ENST00000314045 CCDC47Q96A33 483 aaKnown RBP16.13■□□□□ 0.17
DDX54-202ENST00000314045 CPSF1Q10570 1443 aaKnown RBP16.13■□□□□ 0.17
DDX54-202ENST00000314045 NEURL1BA8MQ27 555 aa16.13■□□□□ 0.17
DDX54-202ENST00000314045 RNF214Q8ND24 703 aa16.13■□□□□ 0.17
DDX54-202ENST00000314045 LAMC1P11047 1609 aa16.13■□□□□ 0.17
DDX54-202ENST00000314045 TTLL7Q6ZT98 887 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 MKNK2Q9HBH9 465 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 PDIA4P13667 645 aaKnown RBP16.12■□□□□ 0.17
DDX54-202ENST00000314045 PROSER3Q2NL68 480 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 PAG1Q9NWQ8 432 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 RBM8AQ9Y5S9 174 aaKnown RBP16.12■□□□□ 0.17
DDX54-202ENST00000314045 RANBP6O60518 1105 aaKnown RBP16.12■□□□□ 0.17
DDX54-202ENST00000314045 NEK1Q96PY6 1258 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 HMG20BQ9P0W2 317 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 TCEAL9Q9UHQ7 104 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 USP31Q70CQ4 1352 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 PNPLA6Q8IY17 1366 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 LDHCP07864 332 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
DDX54-202ENST00000314045 BRPF1P55201 1214 aaPredicted RBP16.11■□□□□ 0.17
DDX54-202ENST00000314045 TCIRG1Q13488 830 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 SLC9C2Q5TAH2 1124 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 RNF41Q9H4P4 317 aaPredicted RBP16.11■□□□□ 0.17
DDX54-202ENST00000314045 TMOD2Q9NZR1 351 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 FRMPD1Q5SYB0 1578 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 CHMLP26374 656 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 ME1P48163 572 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 BEND3Q5T5X7 828 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 JMYQ8N9B5 988 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 ZC3H13Q5T200 1668 aaKnown RBP16.11■□□□□ 0.17
DDX54-202ENST00000314045 NMIQ13287 307 aaPredicted RBP16.11■□□□□ 0.17
DDX54-202ENST00000314045 ZNF594Q96JF6 807 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms