RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 RTL5Q5HYW3 569 aaPredicted RBP21.99■■□□□ 1.11
PUF60-201ENST00000313352 SRGNP10124 158 aa21.98■■□□□ 1.11
PUF60-201ENST00000313352 PARP10Q53GL7 1025 aa21.98■■□□□ 1.11
PUF60-201ENST00000313352 HSP90AB3PQ58FF7 597 aa21.98■■□□□ 1.11
PUF60-201ENST00000313352 UTP14AQ9BVJ6 771 aaKnown RBP21.98■■□□□ 1.11
PUF60-201ENST00000313352 NYXQ9GZU5 481 aa21.98■■□□□ 1.11
PUF60-201ENST00000313352 PPP1R42Q7Z4L9 355 aa21.97■■□□□ 1.11
PUF60-201ENST00000313352 JARID2Q92833 1246 aaPredicted RBP21.97■■□□□ 1.11
PUF60-201ENST00000313352 DALRD3Q5D0E6 543 aaKnown RBP21.96■■□□□ 1.11
PUF60-201ENST00000313352 KSR2Q6VAB6 950 aa21.96■■□□□ 1.11
PUF60-201ENST00000313352 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
PUF60-201ENST00000313352 KLRG2A4D1S0 409 aaPredicted RBP21.96■■□□□ 1.11
PUF60-201ENST00000313352 HCLS1P14317 486 aaPredicted RBP21.96■■□□□ 1.11
PUF60-201ENST00000313352 SLC51AQ86UW1 340 aa21.96■■□□□ 1.11
PUF60-201ENST00000313352 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
PUF60-201ENST00000313352 METTL22Q9BUU2 404 aaPredicted RBP21.96■■□□□ 1.11
PUF60-201ENST00000313352 ZNF219Q9P2Y4 722 aaPredicted RBP21.96■■□□□ 1.11
PUF60-201ENST00000313352 TRMT112Q9UI30 125 aaKnown RBP21.96■■□□□ 1.11
PUF60-201ENST00000313352 IBTKQ9P2D0 1353 aaPredicted RBP21.95■■□□□ 1.11
PUF60-201ENST00000313352 CACNA1SQ13698 1873 aa21.95■■□□□ 1.1
PUF60-201ENST00000313352 F6X3S4 739 aa21.95■■□□□ 1.1
PUF60-201ENST00000313352 CHMP4AQ9BY43 222 aa21.95■■□□□ 1.1
PUF60-201ENST00000313352 IGKV5-2P06315 115 aa21.94■■□□□ 1.1
PUF60-201ENST00000313352 FKBP5Q13451 457 aaPredicted RBP21.94■■□□□ 1.1
PUF60-201ENST00000313352 GRIN3BO60391 1043 aa21.94■■□□□ 1.1
PUF60-201ENST00000313352 DDX58O95786 925 aaKnown RBP21.94■■□□□ 1.1
PUF60-201ENST00000313352 CWF19L2Q2TBE0 894 aaKnown RBP21.94■■□□□ 1.1
PUF60-201ENST00000313352 TTLL6Q8N841 843 aa21.94■■□□□ 1.1
PUF60-201ENST00000313352 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
PUF60-201ENST00000313352 SLX4Q8IY92 1834 aa21.93■■□□□ 1.1
PUF60-201ENST00000313352 ARFGEF1Q9Y6D6 1849 aa21.92■■□□□ 1.1
PUF60-201ENST00000313352 MRPL50Q8N5N7 158 aaKnown RBP21.92■■□□□ 1.1
PUF60-201ENST00000313352 MASTLQ96GX5 879 aa21.92■■□□□ 1.1
PUF60-201ENST00000313352 TRIM28Q13263 835 aaKnown RBP21.92■■□□□ 1.1
PUF60-201ENST00000313352 OLFM4Q6UX06 510 aa21.92■■□□□ 1.1
PUF60-201ENST00000313352 ARHGAP27Q6ZUM4 889 aa21.92■■□□□ 1.1
PUF60-201ENST00000313352 CRY2Q49AN0 593 aa21.91■■□□□ 1.1
PUF60-201ENST00000313352 SLC10A5Q5PT55 438 aa21.91■■□□□ 1.1
PUF60-201ENST00000313352 SH3TC1Q8TE82 1336 aa21.9■■□□□ 1.1
PUF60-201ENST00000313352 C21orf2O43822 256 aa21.9■■□□□ 1.1
PUF60-201ENST00000313352 STYK1Q6J9G0 422 aa21.9■■□□□ 1.1
PUF60-201ENST00000313352 PRPF40BQ6NWY9 871 aaKnown RBP21.9■■□□□ 1.1
PUF60-201ENST00000313352 CACNA1FO60840 1977 aa21.9■■□□□ 1.1
PUF60-201ENST00000313352 LAMB2P55268 1798 aa21.9■■□□□ 1.1
PUF60-201ENST00000313352 DDX60Q8IY21 1712 aaKnown RBP21.9■■□□□ 1.1
PUF60-201ENST00000313352 NPR1P16066 1061 aa21.9■■□□□ 1.1
PUF60-201ENST00000313352 YY1P25490 414 aa21.9■■□□□ 1.1
PUF60-201ENST00000313352 DNAAF4Q8WXU2 420 aa21.89■■□□□ 1.09
PUF60-201ENST00000313352 CHD4Q14839 1912 aa21.89■■□□□ 1.09
PUF60-201ENST00000313352 RIC1Q4ADV7 1423 aa21.88■■□□□ 1.09
PUF60-201ENST00000313352 NEURL1BA8MQ27 555 aa21.87■■□□□ 1.09
PUF60-201ENST00000313352 PRELPP51888 382 aa21.87■■□□□ 1.09
PUF60-201ENST00000313352 RASSF7Q02833 373 aa21.87■■□□□ 1.09
PUF60-201ENST00000313352 CCDC191Q8NCU4 936 aa21.87■■□□□ 1.09
PUF60-201ENST00000313352 NLRP3Q96P20 1036 aa21.87■■□□□ 1.09
PUF60-201ENST00000313352 CWC25Q9NXE8 425 aaPredicted RBP21.87■■□□□ 1.09
PUF60-201ENST00000313352 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
PUF60-201ENST00000313352 COL4A1P02462 1669 aa21.87■■□□□ 1.09
PUF60-201ENST00000313352 ZBED9Q6R2W3 1325 aa21.87■■□□□ 1.09
PUF60-201ENST00000313352 CNKSR1Q969H4 720 aa21.87■■□□□ 1.09
PUF60-201ENST00000313352 TAF1P21675 1872 aa21.86■■□□□ 1.09
PUF60-201ENST00000313352 ZBTB38Q8NAP3 1195 aaPredicted RBP21.86■■□□□ 1.09
PUF60-201ENST00000313352 IRS4O14654 1257 aaPredicted RBP21.85■■□□□ 1.09
PUF60-201ENST00000313352 C7orf43Q8WVR3 580 aa21.85■■□□□ 1.09
PUF60-201ENST00000313352 RNF123Q5XPI4 1314 aa21.85■■□□□ 1.09
PUF60-201ENST00000313352 NEXNQ0ZGT2 675 aa21.85■■□□□ 1.09
PUF60-201ENST00000313352 RPGRQ92834 1020 aaKnown RBP21.85■■□□□ 1.09
PUF60-201ENST00000313352 SMC4Q9NTJ3 1288 aa21.85■■□□□ 1.09
PUF60-201ENST00000313352 NFKBIEO00221 500 aa21.84■■□□□ 1.09
PUF60-201ENST00000313352 PCCAP05165 728 aaPredicted RBP21.84■■□□□ 1.09
PUF60-201ENST00000313352 HOXA10P31260 410 aaPredicted RBP21.84■■□□□ 1.09
PUF60-201ENST00000313352 BEND3Q5T5X7 828 aa21.84■■□□□ 1.09
PUF60-201ENST00000313352 SLC4A10Q6U841 1118 aa21.83■■□□□ 1.09
PUF60-201ENST00000313352 RARSP54136 660 aaKnown RBP21.83■■□□□ 1.08
PUF60-201ENST00000313352 GCKRQ14397 625 aa21.83■■□□□ 1.08
PUF60-201ENST00000313352 CCDC85AQ96PX6 553 aaPredicted RBP21.83■■□□□ 1.08
PUF60-201ENST00000313352 ABCC4O15439 1325 aa21.82■■□□□ 1.08
PUF60-201ENST00000313352 ALDH1L2Q3SY69 923 aa21.82■■□□□ 1.08
PUF60-201ENST00000313352 ALDH1B1P30837 517 aa21.81■■□□□ 1.08
PUF60-201ENST00000313352 UBE3BQ7Z3V4 1068 aa21.81■■□□□ 1.08
PUF60-201ENST00000313352 LINS1Q8NG48 757 aa21.81■■□□□ 1.08
PUF60-201ENST00000313352 RBM17Q96I25 401 aaKnown RBP21.81■■□□□ 1.08
PUF60-201ENST00000313352 H7C1W4 665 aa21.8■■□□□ 1.08
PUF60-201ENST00000313352 BCAR3O75815 825 aa21.8■■□□□ 1.08
PUF60-201ENST00000313352 CASP7P55210 303 aa21.8■■□□□ 1.08
PUF60-201ENST00000313352 CRAMP1Q96RY5 1269 aa21.8■■□□□ 1.08
PUF60-201ENST00000313352 NOB1Q9ULX3 412 aaKnown RBP21.8■■□□□ 1.08
PUF60-201ENST00000313352 SBF1O95248 1867 aa21.79■■□□□ 1.08
PUF60-201ENST00000313352 FER1L6Q2WGJ9 1857 aa21.79■■□□□ 1.08
PUF60-201ENST00000313352 SF3B3Q15393 1217 aaKnown RBP21.79■■□□□ 1.08
PUF60-201ENST00000313352 C9orf131Q5VYM1 1079 aa21.79■■□□□ 1.08
PUF60-201ENST00000313352 SEC31BQ9NQW1 1179 aa21.79■■□□□ 1.08
PUF60-201ENST00000313352 CT47B1P0C2W7 299 aaPredicted RBP21.78■■□□□ 1.08
PUF60-201ENST00000313352 CELF1Q92879 486 aaKnown RBP21.78■■□□□ 1.08
PUF60-201ENST00000313352 TNNQ9UQP3 1299 aa21.78■■□□□ 1.08
PUF60-201ENST00000313352 SNED1Q8TER0 1413 aa21.77■■□□□ 1.08
PUF60-201ENST00000313352 PPEF1O14829 653 aaPredicted RBP21.77■■□□□ 1.08
PUF60-201ENST00000313352 CDHR2Q9BYE9 1310 aa21.77■■□□□ 1.08
PUF60-201ENST00000313352 CCDC88AQ3V6T2 1871 aa21.76■■□□□ 1.07
PUF60-201ENST00000313352 PDE8AO60658 829 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms