RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PLBD2Q8NHP8 589 aa18.95■□□□□ 0.62
PPP1CA-201ENST00000312989 ISCA1Q9BUE6 129 aa18.95■□□□□ 0.62
PPP1CA-201ENST00000312989 ANKRD36CQ5JPF3 1778 aa18.95■□□□□ 0.62
PPP1CA-201ENST00000312989 LMNB1P20700 586 aa18.94■□□□□ 0.62
PPP1CA-201ENST00000312989 SYNE4Q8N205 404 aa18.94■□□□□ 0.62
PPP1CA-201ENST00000312989 PHAXQ9H814 394 aaKnown RBP18.94■□□□□ 0.62
PPP1CA-201ENST00000312989 SPINK5Q9NQ38 1064 aaPredicted RBP18.94■□□□□ 0.62
PPP1CA-201ENST00000312989 ZNF219Q9P2Y4 722 aaPredicted RBP18.94■□□□□ 0.62
PPP1CA-201ENST00000312989 FER1L6Q2WGJ9 1857 aa18.94■□□□□ 0.62
PPP1CA-201ENST00000312989 HYPKQ9NX55 129 aa18.93■□□□□ 0.62
PPP1CA-201ENST00000312989 HSP90AB3PQ58FF7 597 aa18.93■□□□□ 0.62
PPP1CA-201ENST00000312989 ANKRD13DQ6ZTN6 518 aa18.93■□□□□ 0.62
PPP1CA-201ENST00000312989 UTP14AQ9BVJ6 771 aaKnown RBP18.93■□□□□ 0.62
PPP1CA-201ENST00000312989 NMRK2Q9NPI5 230 aa18.93■□□□□ 0.62
PPP1CA-201ENST00000312989 RNF123Q5XPI4 1314 aa18.93■□□□□ 0.62
PPP1CA-201ENST00000312989 ZNF521Q96K83 1311 aa18.93■□□□□ 0.62
PPP1CA-201ENST00000312989 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
PPP1CA-201ENST00000312989 ZC3H4Q9UPT8 1303 aaKnown RBP18.93■□□□□ 0.62
PPP1CA-201ENST00000312989 PPP1R42Q7Z4L9 355 aa18.92■□□□□ 0.62
PPP1CA-201ENST00000312989 GTF2E1P29083 439 aaPredicted RBP18.91■□□□□ 0.62
PPP1CA-201ENST00000312989 WDR63Q8IWG1 891 aa18.91■□□□□ 0.62
PPP1CA-201ENST00000312989 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
PPP1CA-201ENST00000312989 TAOK3Q9H2K8 898 aa18.9■□□□□ 0.62
PPP1CA-201ENST00000312989 TIAM2Q8IVF5 1701 aa18.89■□□□□ 0.61
PPP1CA-201ENST00000312989 TRIM28Q13263 835 aaKnown RBP18.89■□□□□ 0.61
PPP1CA-201ENST00000312989 ZNF428Q96B54 188 aa18.89■□□□□ 0.61
PPP1CA-201ENST00000312989 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
PPP1CA-201ENST00000312989 ATP5J2-PTCD1G3V325 749 aa18.88■□□□□ 0.61
PPP1CA-201ENST00000312989 ALDH1B1P30837 517 aa18.88■□□□□ 0.61
PPP1CA-201ENST00000312989 CCDC93Q567U6 631 aa18.88■□□□□ 0.61
PPP1CA-201ENST00000312989 SOGA3Q5TF21 947 aa18.88■□□□□ 0.61
PPP1CA-201ENST00000312989 CRAMP1Q96RY5 1269 aa18.88■□□□□ 0.61
PPP1CA-201ENST00000312989 CACNA1SQ13698 1873 aa18.88■□□□□ 0.61
PPP1CA-201ENST00000312989 COL4A1P02462 1669 aa18.87■□□□□ 0.61
PPP1CA-201ENST00000312989 SH3TC1Q8TE82 1336 aa18.87■□□□□ 0.61
PPP1CA-201ENST00000312989 CEP350Q5VT06 3117 aa18.87■□□□□ 0.61
PPP1CA-201ENST00000312989 HCLS1P14317 486 aaPredicted RBP18.87■□□□□ 0.61
PPP1CA-201ENST00000312989 TWISTNBQ3B726 338 aaPredicted RBP18.87■□□□□ 0.61
PPP1CA-201ENST00000312989 CCDC30Q5VVM6 783 aa18.87■□□□□ 0.61
PPP1CA-201ENST00000312989 COL4A5P29400 1685 aa18.87■□□□□ 0.61
PPP1CA-201ENST00000312989 ABCC4O15439 1325 aa18.86■□□□□ 0.61
PPP1CA-201ENST00000312989 POTECB2RU33 542 aa18.86■□□□□ 0.61
PPP1CA-201ENST00000312989 G2E3Q7L622 706 aa18.86■□□□□ 0.61
PPP1CA-201ENST00000312989 TRMT112Q9UI30 125 aaKnown RBP18.86■□□□□ 0.61
PPP1CA-201ENST00000312989 DDX60Q8IY21 1712 aaKnown RBP18.85■□□□□ 0.61
PPP1CA-201ENST00000312989 GLTPD2A6NH11 291 aa18.85■□□□□ 0.61
PPP1CA-201ENST00000312989 TCERG1O14776 1098 aaKnown RBP18.85■□□□□ 0.61
PPP1CA-201ENST00000312989 VAMP4O75379 141 aa18.85■□□□□ 0.61
PPP1CA-201ENST00000312989 FKBP4Q02790 459 aaKnown RBP eCLIP18.85■□□□□ 0.61
PPP1CA-201ENST00000312989 NLRP3Q96P20 1036 aa18.85■□□□□ 0.61
PPP1CA-201ENST00000312989 LAMB2P55268 1798 aa18.85■□□□□ 0.61
PPP1CA-201ENST00000312989 RPGRQ92834 1020 aaKnown RBP18.84■□□□□ 0.61
PPP1CA-201ENST00000312989 FAM89AQ96GI7 184 aa18.84■□□□□ 0.61
PPP1CA-201ENST00000312989 GOLGA2Q08379 1002 aa18.83■□□□□ 0.61
PPP1CA-201ENST00000312989 RBM17Q96I25 401 aaKnown RBP18.83■□□□□ 0.61
PPP1CA-201ENST00000312989 PSMD1Q99460 953 aa18.83■□□□□ 0.61
PPP1CA-201ENST00000312989 PPEF1O14829 653 aaPredicted RBP18.82■□□□□ 0.6
PPP1CA-201ENST00000312989 IGKV5-2P06315 115 aa18.82■□□□□ 0.6
PPP1CA-201ENST00000312989 EXOSC9Q06265 439 aaKnown RBP18.82■□□□□ 0.6
PPP1CA-201ENST00000312989 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
PPP1CA-201ENST00000312989 RTKN2Q8IZC4 609 aa18.82■□□□□ 0.6
PPP1CA-201ENST00000312989 METTL22Q9BUU2 404 aaPredicted RBP18.82■□□□□ 0.6
PPP1CA-201ENST00000312989 ZNF277Q9NRM2 450 aaPredicted RBP18.82■□□□□ 0.6
PPP1CA-201ENST00000312989 KDM2BQ8NHM5 1336 aa18.82■□□□□ 0.6
PPP1CA-201ENST00000312989 SF3B3Q15393 1217 aaKnown RBP18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 MYD88Q99836 296 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 WDR90Q96KV7 1748 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 DICER1Q9UPY3 1922 aaKnown RBP18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 PI4KAP2A4QPH2 592 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 TOMM70O94826 608 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 CC2D2BQ6DHV5 1058 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 KSR2Q6VAB6 950 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 PI4KAP1Q8N8J0 262 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 RRAGCQ9HB90 399 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 MAP3K2Q9Y2U5 619 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 ATP6V0A2Q9Y487 856 aa18.81■□□□□ 0.6
PPP1CA-201ENST00000312989 DUOX1Q9NRD9 1551 aa18.8■□□□□ 0.6
PPP1CA-201ENST00000312989 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
PPP1CA-201ENST00000312989 ZNF541Q9H0D2 1346 aa18.79■□□□□ 0.6
PPP1CA-201ENST00000312989 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
PPP1CA-201ENST00000312989 IARSP41252 1262 aaKnown RBP18.79■□□□□ 0.6
PPP1CA-201ENST00000312989 GRAPQ13588 217 aa18.79■□□□□ 0.6
PPP1CA-201ENST00000312989 RTL5Q5HYW3 569 aaPredicted RBP18.79■□□□□ 0.6
PPP1CA-201ENST00000312989 ZBTB38Q8NAP3 1195 aaPredicted RBP18.79■□□□□ 0.6
PPP1CA-201ENST00000312989 CCDC191Q8NCU4 936 aa18.79■□□□□ 0.6
PPP1CA-201ENST00000312989 GRAPLQ8TC17 118 aaPredicted RBP18.79■□□□□ 0.6
PPP1CA-201ENST00000312989 CHMP4AQ9BY43 222 aa18.79■□□□□ 0.6
PPP1CA-201ENST00000312989 CCDC88AQ3V6T2 1871 aa18.78■□□□□ 0.6
PPP1CA-201ENST00000312989 LRRC37AA6NMS7 1700 aa18.78■□□□□ 0.6
PPP1CA-201ENST00000312989 FZD9O00144 591 aa18.78■□□□□ 0.6
PPP1CA-201ENST00000312989 IRS4O14654 1257 aaPredicted RBP18.78■□□□□ 0.6
PPP1CA-201ENST00000312989 PCCAP05165 728 aaPredicted RBP18.78■□□□□ 0.6
PPP1CA-201ENST00000312989 FLIIQ13045 1269 aa18.78■□□□□ 0.6
PPP1CA-201ENST00000312989 CELF1Q92879 486 aaKnown RBP18.78■□□□□ 0.6
PPP1CA-201ENST00000312989 STK31Q9BXU1 1019 aa18.78■□□□□ 0.6
PPP1CA-201ENST00000312989 DDNO94850 711 aaPredicted RBP18.77■□□□□ 0.6
PPP1CA-201ENST00000312989 RBM46Q8TBY0 533 aaKnown RBP18.77■□□□□ 0.6
PPP1CA-201ENST00000312989 RTFDC1Q9BY42 306 aaPredicted RBP18.77■□□□□ 0.6
PPP1CA-201ENST00000312989 BBOX1O75936 387 aa18.76■□□□□ 0.59
PPP1CA-201ENST00000312989 DDX58O95786 925 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms