RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 DYDC1Q8WWB3 177 aa16.08■□□□□ 0.16
PRKCB-201ENST00000303531 SLC26A6Q9BXS9 759 aa16.08■□□□□ 0.16
PRKCB-201ENST00000303531 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
PRKCB-201ENST00000303531 ZSCAN16Q9H4T2 348 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-201ENST00000303531 PDE1AP54750 535 aa16.07■□□□□ 0.16
PRKCB-201ENST00000303531 DDX46Q7L014 1031 aaKnown RBP16.07■□□□□ 0.16
PRKCB-201ENST00000303531 BRF1Q92994 677 aa16.07■□□□□ 0.16
PRKCB-201ENST00000303531 CCDC102BQ68D86 513 aa16.07■□□□□ 0.16
PRKCB-201ENST00000303531 KIF20AO95235 890 aa16.07■□□□□ 0.16
PRKCB-201ENST00000303531 CNPY2Q9Y2B0 182 aa16.07■□□□□ 0.16
PRKCB-201ENST00000303531 CAVIN2O95810 425 aa16.06■□□□□ 0.16
PRKCB-201ENST00000303531 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
PRKCB-201ENST00000303531 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
PRKCB-201ENST00000303531 CUL5Q93034 780 aa16.06■□□□□ 0.16
PRKCB-201ENST00000303531 CEBPAP49715 358 aaPredicted RBP16.06■□□□□ 0.16
PRKCB-201ENST00000303531 ESYT1Q9BSJ8 1104 aa16.06■□□□□ 0.16
PRKCB-201ENST00000303531 KIF5BP33176 963 aa16.06■□□□□ 0.16
PRKCB-201ENST00000303531 IFFO1Q0D2I5 559 aa16.06■□□□□ 0.16
PRKCB-201ENST00000303531 KRT28Q7Z3Y7 464 aa16.06■□□□□ 0.16
PRKCB-201ENST00000303531 CALML4Q96GE6 196 aa16.06■□□□□ 0.16
PRKCB-201ENST00000303531 THOC2Q8NI27 1593 aaKnown RBP16.05■□□□□ 0.16
PRKCB-201ENST00000303531 ANKRD44Q8N8A2 993 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 ANKRD24Q8TF21 1146 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 GOPCQ9HD26 462 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 FANCAO15360 1455 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 SNRPA1P09661 255 aaKnown RBP16.05■□□□□ 0.16
PRKCB-201ENST00000303531 RPGRQ92834 1020 aaKnown RBP16.05■□□□□ 0.16
PRKCB-201ENST00000303531 LAMC3Q9Y6N6 1575 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 TSPY2A6NKD2 308 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 IDEP14735 1019 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 CEP135Q66GS9 1140 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 MRPL50Q8N5N7 158 aaKnown RBP16.05■□□□□ 0.16
PRKCB-201ENST00000303531 TCEANC2Q96MN5 208 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 NEBLO76041 1014 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 ANKRD13DQ6ZTN6 518 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 MAP2K1Q02750 393 aaPredicted RBP16.05■□□□□ 0.16
PRKCB-201ENST00000303531 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 CCDC150Q8NCX0 1101 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 LRRC2Q9BYS8 371 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 KLF18A0A0U1RQI7 1052 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 AMPD3Q01432 767 aa16.05■□□□□ 0.16
PRKCB-201ENST00000303531 CCDC12Q8WUD4 166 aaPredicted RBP16.05■□□□□ 0.16
PRKCB-201ENST00000303531 ALS2CR12Q96Q35 445 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 GOLGA6L9A6NEM1 432 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 TEX13AQ9BXU3 409 aaPredicted RBP16.04■□□□□ 0.16
PRKCB-201ENST00000303531 ADAMTS2O95450 1211 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 C8orf34Q49A92 452 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 KAT14Q9H8E8 782 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 CCDC40Q4G0X9 1142 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 CDC5LQ99459 802 aaKnown RBP16.04■□□□□ 0.16
PRKCB-201ENST00000303531 RBM8AQ9Y5S9 174 aaKnown RBP16.04■□□□□ 0.16
PRKCB-201ENST00000303531 UBA7P41226 1012 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 PDE4BQ07343 736 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 VAT1LQ9HCJ6 419 aa16.04■□□□□ 0.16
PRKCB-201ENST00000303531 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
PRKCB-201ENST00000303531 SYKP43405 635 aa16.03■□□□□ 0.16
PRKCB-201ENST00000303531 EXOC5O00471 708 aa16.03■□□□□ 0.16
PRKCB-201ENST00000303531 SLC4A8Q2Y0W8 1093 aa16.03■□□□□ 0.16
PRKCB-201ENST00000303531 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
PRKCB-201ENST00000303531 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
PRKCB-201ENST00000303531 ZNF830Q96NB3 372 aaPredicted RBP16.03■□□□□ 0.16
PRKCB-201ENST00000303531 BCCIPQ9P287 314 aaKnown RBP eCLIP16.03■□□□□ 0.16
PRKCB-201ENST00000303531 ANO6Q4KMQ2 910 aa16.03■□□□□ 0.16
PRKCB-201ENST00000303531 PYM1Q9BRP8 204 aaKnown RBP16.03■□□□□ 0.16
PRKCB-201ENST00000303531 MAPKBP1O60336 1514 aa16.03■□□□□ 0.16
PRKCB-201ENST00000303531 ANAPC15P60006 121 aa16.03■□□□□ 0.16
PRKCB-201ENST00000303531 TCERG1LQ5VWI1 586 aa16.02■□□□□ 0.16
PRKCB-201ENST00000303531 PPP4R3AQ6IN85 833 aa16.02■□□□□ 0.16
PRKCB-201ENST00000303531 CTNNBL1Q8WYA6 563 aaPredicted RBP16.02■□□□□ 0.16
PRKCB-201ENST00000303531 GNG11P61952 73 aa16.02■□□□□ 0.15
PRKCB-201ENST00000303531 FAM114A1Q8IWE2 563 aa16.02■□□□□ 0.15
PRKCB-201ENST00000303531 PAXBP1Q9Y5B6 917 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
PRKCB-201ENST00000303531 ATP8B2P98198 1209 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 SNX21Q969T3 373 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 GPATCH8Q9UKJ3 1502 aaKnown RBP16.01■□□□□ 0.15
PRKCB-201ENST00000303531 MACROD2A1Z1Q3 448 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 HLTFQ14527 1009 aaKnown RBP eCLIP16.01■□□□□ 0.15
PRKCB-201ENST00000303531 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 KDM5BQ9UGL1 1544 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 TMCO5BA8MYB1 307 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 PARD3Q8TEW0 1356 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 DENND4BO75064 1496 aaPredicted RBP16.01■□□□□ 0.15
PRKCB-201ENST00000303531 MAPK8IP2Q13387 824 aaPredicted RBP16.01■□□□□ 0.15
PRKCB-201ENST00000303531 SPTY2D1Q68D10 685 aaPredicted RBP16.01■□□□□ 0.15
PRKCB-201ENST00000303531 ZSWIM4Q9H7M6 989 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 UQCRFS1P1P0C7P4 283 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.151e-7■■■■□ 19.5
PRKCB-201ENST00000303531 WTAPQ15007 396 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 CCDC91Q7Z6B0 441 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 NAA15Q9BXJ9 866 aaKnown RBP16.01■□□□□ 0.15
PRKCB-201ENST00000303531 DYNC1I1O14576 645 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 XAGE3Q8WTP9 111 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 TNNQ9UQP3 1299 aa16.01■□□□□ 0.15
PRKCB-201ENST00000303531 C6orf229H3BNL8 230 aa16■□□□□ 0.15
PRKCB-201ENST00000303531 N4BP3O15049 544 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms