RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 NBPF5PQ86XG9 351 aaPredicted RBP8.75□□□□□ -1.01
ITGB1-201ENST00000302278 NBPF15Q8N660 670 aa8.75□□□□□ -1.01
ITGB1-201ENST00000302278 RNF123Q5XPI4 1314 aa8.75□□□□□ -1.01
ITGB1-201ENST00000302278 SNRPA1P09661 255 aaKnown RBP8.75□□□□□ -1.01
ITGB1-201ENST00000302278 CAPNS2Q96L46 248 aa8.75□□□□□ -1.01
ITGB1-201ENST00000302278 TAF1P21675 1872 aa8.75□□□□□ -1.01
ITGB1-201ENST00000302278 NYXQ9GZU5 481 aa8.74□□□□□ -1.01
ITGB1-201ENST00000302278 SAGE1Q9NXZ1 904 aa8.74□□□□□ -1.01
ITGB1-201ENST00000302278 USP16Q9Y5T5 823 aa8.74□□□□□ -1.01
ITGB1-201ENST00000302278 BTBD11A6QL63 1104 aa8.74□□□□□ -1.01
ITGB1-201ENST00000302278 MAP1SQ66K74 1059 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-201ENST00000302278 ZC3H15Q8WU90 426 aaKnown RBP8.74□□□□□ -1.01
ITGB1-201ENST00000302278 ERBB4Q15303 1308 aa8.73□□□□□ -1.01
ITGB1-201ENST00000302278 KCNQ3O43525 872 aa8.73□□□□□ -1.01
ITGB1-201ENST00000302278 SAPCD2Q86UD0 394 aa8.73□□□□□ -1.01
ITGB1-201ENST00000302278 CCDC24Q8N4L8 307 aa8.73□□□□□ -1.01
ITGB1-201ENST00000302278 ADARB2Q9NS39 739 aaKnown RBP8.73□□□□□ -1.01
ITGB1-201ENST00000302278 PAPPA2Q9BXP8 1791 aa8.72□□□□□ -1.01
ITGB1-201ENST00000302278 EIF6P56537 245 aaKnown RBP8.72□□□□□ -1.01
ITGB1-201ENST00000302278 EAPPQ56P03 285 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-201ENST00000302278 SLC10A5Q5PT55 438 aa8.72□□□□□ -1.01
ITGB1-201ENST00000302278 GPRC5DQ9NZD1 345 aa8.72□□□□□ -1.01
ITGB1-201ENST00000302278 ZNF219Q9P2Y4 722 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-201ENST00000302278 OLFM4Q6UX06 510 aa8.72□□□□□ -1.01
ITGB1-201ENST00000302278 ZNF34Q8IZ26 560 aa8.72□□□□□ -1.01
ITGB1-201ENST00000302278 GPR101Q96P66 508 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-201ENST00000302278 NIP7Q9Y221 180 aaKnown RBP eCLIP8.72□□□□□ -1.01
ITGB1-201ENST00000302278 MAP3K15Q6ZN16 1313 aa8.72□□□□□ -1.01
ITGB1-201ENST00000302278 TRIM26Q12899 539 aaPredicted RBP8.71□□□□□ -1.01
ITGB1-201ENST00000302278 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.01
ITGB1-201ENST00000302278 JDP2Q8WYK2 163 aa8.71□□□□□ -1.01
ITGB1-201ENST00000302278 NTSR2O95665 410 aa8.71□□□□□ -1.02
ITGB1-201ENST00000302278 LMOD1P29536 600 aaPredicted RBP8.71□□□□□ -1.02
ITGB1-201ENST00000302278 HLFQ16534 295 aa8.71□□□□□ -1.02
ITGB1-201ENST00000302278 PHACTR3Q96KR7 559 aa8.71□□□□□ -1.02
ITGB1-201ENST00000302278 MCOLN1Q9GZU1 580 aa8.71□□□□□ -1.02
ITGB1-201ENST00000302278 UBN2Q6ZU65 1347 aa8.71□□□□□ -1.02
ITGB1-201ENST00000302278 CASP8AP2Q9UKL3 1982 aa8.71□□□□□ -1.02
ITGB1-201ENST00000302278 PRAMEF22A3QJZ6 481 aa8.71□□□□□ -1.02
ITGB1-201ENST00000302278 ABT1Q9ULW3 272 aaKnown RBP8.71□□□□□ -1.02
ITGB1-201ENST00000302278 EPS15P42566 896 aa8.7□□□□□ -1.02
ITGB1-201ENST00000302278 CYP4F22Q6NT55 531 aa8.7□□□□□ -1.02
ITGB1-201ENST00000302278 FAM155AB1AL88 458 aaPredicted RBP8.7□□□□□ -1.02
ITGB1-201ENST00000302278 CLEC11AQ9Y240 323 aa8.7□□□□□ -1.02
ITGB1-201ENST00000302278 ATP6V0A2Q9Y487 856 aa8.7□□□□□ -1.02
ITGB1-201ENST00000302278 SUPT20HQ8NEM7 779 aa8.69□□□□□ -1.02
ITGB1-201ENST00000302278 RBM17Q96I25 401 aaKnown RBP8.69□□□□□ -1.02
ITGB1-201ENST00000302278 ECM29Q5VYK3 1845 aa8.69□□□□□ -1.02
ITGB1-201ENST00000302278 PPEF1O14829 653 aaPredicted RBP8.69□□□□□ -1.02
ITGB1-201ENST00000302278 COL4A1P02462 1669 aa8.69□□□□□ -1.02
ITGB1-201ENST00000302278 PNISRQ8TF01 805 aaKnown RBP8.69□□□□□ -1.02
ITGB1-201ENST00000302278 ZNRF3Q9ULT6 936 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 POLR2AP24928 1970 aaKnown RBP8.68□□□□□ -1.02
ITGB1-201ENST00000302278 SCN9AQ15858 1988 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 REM2Q8IYK8 340 aaPredicted RBP8.68□□□□□ -1.02
ITGB1-201ENST00000302278 TRAF5O00463 557 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 AOC2O75106 756 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 PRKAR2BP31323 418 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 KIAA2012Q0VF49 1180 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 NOGQ13253 232 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 PARP10Q53GL7 1025 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
ITGB1-201ENST00000302278 NIM1KQ8IY84 436 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 BEGAINQ9BUH8 593 aa8.68□□□□□ -1.02
ITGB1-201ENST00000302278 TAF7Q15545 349 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-201ENST00000302278 TMC4Q7Z404 712 aa8.67□□□□□ -1.02
ITGB1-201ENST00000302278 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
ITGB1-201ENST00000302278 FMR1Q06787 632 aaKnown RBP eCLIP8.67□□□□□ -1.022e-15■■■□□ 17.5
ITGB1-201ENST00000302278 NOM1Q5C9Z4 860 aaKnown RBP8.67□□□□□ -1.02
ITGB1-201ENST00000302278 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
ITGB1-201ENST00000302278 NPHP1O15259 732 aa8.67□□□□□ -1.02
ITGB1-201ENST00000302278 HIRAP54198 1017 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-201ENST00000302278 SUSD4Q5VX71 490 aa8.67□□□□□ -1.02
ITGB1-201ENST00000302278 LARGE2Q8N3Y3 721 aa8.67□□□□□ -1.02
ITGB1-201ENST00000302278 DPF2Q92785 391 aa8.67□□□□□ -1.02
ITGB1-201ENST00000302278 BABAM1Q9NWV8 329 aa8.67□□□□□ -1.02
ITGB1-201ENST00000302278 ABCC4O15439 1325 aa8.66□□□□□ -1.02
ITGB1-201ENST00000302278 CCDC85CA6NKD9 419 aa8.66□□□□□ -1.02
ITGB1-201ENST00000302278 CXCL9Q07325 125 aa8.66□□□□□ -1.02
ITGB1-201ENST00000302278 RPGRQ92834 1020 aaKnown RBP8.66□□□□□ -1.02
ITGB1-201ENST00000302278 EIF4A1P60842 406 aaKnown RBP8.66□□□□□ -1.02
ITGB1-201ENST00000302278 CDC37L1Q7L3B6 337 aa8.66□□□□□ -1.02
ITGB1-201ENST00000302278 BBOX1O75936 387 aa8.66□□□□□ -1.02
ITGB1-201ENST00000302278 C3orf67Q6ZVT6 689 aa8.66□□□□□ -1.02
ITGB1-201ENST00000302278 NECTIN2Q92692 538 aa8.66□□□□□ -1.02
ITGB1-201ENST00000302278 A0A1B0GUL6 1792 aa8.66□□□□□ -1.02
ITGB1-201ENST00000302278 TNIP1Q15025 636 aa8.65□□□□□ -1.02
ITGB1-201ENST00000302278 POLR3GLQ9BT43 218 aa8.65□□□□□ -1.02
ITGB1-201ENST00000302278 CFHR5Q9BXR6 569 aa8.65□□□□□ -1.02
ITGB1-201ENST00000302278 CELF2O95319 508 aaKnown RBP8.65□□□□□ -1.02
ITGB1-201ENST00000302278 PIP4K2AP48426 406 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-201ENST00000302278 GMPSP49915 693 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-201ENST00000302278 PDIA6Q15084 440 aa8.65□□□□□ -1.02
ITGB1-201ENST00000302278 PLEKHF1Q96S99 279 aa8.65□□□□□ -1.02
ITGB1-201ENST00000302278 ZNF330Q9Y3S2 320 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-201ENST00000302278 GJA3Q9Y6H8 435 aa8.65□□□□□ -1.02
ITGB1-201ENST00000302278 RPS12P25398 132 aaKnown RBP8.65□□□□□ -1.03
ITGB1-201ENST00000302278 PRPF38BQ5VTL8 546 aaKnown RBP8.65□□□□□ -1.03
ITGB1-201ENST00000302278 PPP1R42Q7Z4L9 355 aa8.65□□□□□ -1.03
ITGB1-201ENST00000302278 PPIP5K2O43314 1243 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms