RNA–Protein interactions for RNA: ENST00000298876.8

SMCO2-201, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMCO2, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-201ENST00000298876 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
SMCO2-201ENST00000298876 C8orf58Q8NAV2 365 aa10.64□□□□□ -0.71
SMCO2-201ENST00000298876 FBXO3Q9UK99 471 aa10.64□□□□□ -0.71
SMCO2-201ENST00000298876 ATP10DQ9P241 1426 aa10.64□□□□□ -0.71
SMCO2-201ENST00000298876 TCIRG1Q13488 830 aa10.63□□□□□ -0.71
SMCO2-201ENST00000298876 PROSER3Q2NL68 480 aa10.63□□□□□ -0.71
SMCO2-201ENST00000298876 ZNF34Q8IZ26 560 aa10.63□□□□□ -0.71
SMCO2-201ENST00000298876 NLRP3Q96P20 1036 aa10.63□□□□□ -0.71
SMCO2-201ENST00000298876 TRMT112Q9UI30 125 aaKnown RBP10.63□□□□□ -0.71
SMCO2-201ENST00000298876 FANCIQ9NVI1 1328 aa10.62□□□□□ -0.71
SMCO2-201ENST00000298876 SRGNP10124 158 aa10.62□□□□□ -0.71
SMCO2-201ENST00000298876 KCNA3P22001 575 aa10.62□□□□□ -0.71
SMCO2-201ENST00000298876 IBTKQ9P2D0 1353 aaPredicted RBP10.62□□□□□ -0.71
SMCO2-201ENST00000298876 E9PSI1 815 aa10.61□□□□□ -0.71
SMCO2-201ENST00000298876 ERFEQ4G0M1 354 aa10.61□□□□□ -0.71
SMCO2-201ENST00000298876 SUSD4Q5VX71 490 aa10.61□□□□□ -0.71
SMCO2-201ENST00000298876 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
SMCO2-201ENST00000298876 RBM17Q96I25 401 aaKnown RBP10.61□□□□□ -0.71
SMCO2-201ENST00000298876 KIF13BQ9NQT8 1826 aa10.61□□□□□ -0.71
SMCO2-201ENST00000298876 SH3TC1Q8TE82 1336 aa10.6□□□□□ -0.71
SMCO2-201ENST00000298876 BCORQ6W2J9 1755 aa10.6□□□□□ -0.71
SMCO2-201ENST00000298876 EXOSC9Q06265 439 aaKnown RBP10.6□□□□□ -0.71
SMCO2-201ENST00000298876 LRP10Q7Z4F1 713 aa10.6□□□□□ -0.71
SMCO2-201ENST00000298876 NLRP10Q86W26 655 aa10.6□□□□□ -0.71
SMCO2-201ENST00000298876 TSPYL6Q8N831 410 aa10.6□□□□□ -0.71
SMCO2-201ENST00000298876 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
SMCO2-201ENST00000298876 C21orf2O43822 256 aa10.59□□□□□ -0.71
SMCO2-201ENST00000298876 FKBP5Q13451 457 aaPredicted RBP10.59□□□□□ -0.71
SMCO2-201ENST00000298876 GRIPAP1Q4V328 841 aa10.59□□□□□ -0.71
SMCO2-201ENST00000298876 PRPF40BQ6NWY9 871 aaKnown RBP10.59□□□□□ -0.71
SMCO2-201ENST00000298876 KSR2Q6VAB6 950 aa10.59□□□□□ -0.71
SMCO2-201ENST00000298876 RTKN2Q8IZC4 609 aa10.59□□□□□ -0.71
SMCO2-201ENST00000298876 MIER1Q8N108 512 aa10.59□□□□□ -0.71
SMCO2-201ENST00000298876 MYD88Q99836 296 aa10.59□□□□□ -0.71
SMCO2-201ENST00000298876 PHAXQ9H814 394 aaKnown RBP10.59□□□□□ -0.71
SMCO2-201ENST00000298876 GPBP1L1Q9HC44 474 aaPredicted RBP10.59□□□□□ -0.71
SMCO2-201ENST00000298876 UBN2Q6ZU65 1347 aa10.58□□□□□ -0.71
SMCO2-201ENST00000298876 NRXN2Q9P2S2 1712 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 N4BP2Q86UW6 1770 aaPredicted RBP10.58□□□□□ -0.72
SMCO2-201ENST00000298876 KLRG2A4D1S0 409 aaPredicted RBP10.58□□□□□ -0.72
SMCO2-201ENST00000298876 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
SMCO2-201ENST00000298876 NTSR2O95665 410 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 LMNB1P20700 586 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 CCDC93Q567U6 631 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 SLC10A5Q5PT55 438 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 CC2D2BQ6DHV5 1058 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 DDX46Q7L014 1031 aaKnown RBP10.58□□□□□ -0.72
SMCO2-201ENST00000298876 ZNF784Q8NCA9 323 aaPredicted RBP10.58□□□□□ -0.72
SMCO2-201ENST00000298876 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 CWC25Q9NXE8 425 aaPredicted RBP10.58□□□□□ -0.72
SMCO2-201ENST00000298876 RNF181Q9P0P0 153 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 MAP3K2Q9Y2U5 619 aa10.58□□□□□ -0.72
SMCO2-201ENST00000298876 AFDNP55196 1824 aaKnown RBP10.57□□□□□ -0.72
SMCO2-201ENST00000298876 PI4KAP2A4QPH2 592 aa10.57□□□□□ -0.72
SMCO2-201ENST00000298876 VAMP4O75379 141 aa10.57□□□□□ -0.72
SMCO2-201ENST00000298876 FLIIQ13045 1269 aa10.57□□□□□ -0.72
SMCO2-201ENST00000298876 TRIM28Q13263 835 aaKnown RBP10.57□□□□□ -0.72
SMCO2-201ENST00000298876 C9orf131Q5VYM1 1079 aa10.57□□□□□ -0.72
SMCO2-201ENST00000298876 PI4KAP1Q8N8J0 262 aa10.57□□□□□ -0.72
SMCO2-201ENST00000298876 ZNF428Q96B54 188 aa10.57□□□□□ -0.72
SMCO2-201ENST00000298876 METTL22Q9BUU2 404 aaPredicted RBP10.57□□□□□ -0.72
SMCO2-201ENST00000298876 TAOK3Q9H2K8 898 aa10.57□□□□□ -0.72
SMCO2-201ENST00000298876 GOLGB1Q14789 3259 aaKnown RBP10.57□□□□□ -0.72
SMCO2-201ENST00000298876 KDM2BQ8NHM5 1336 aa10.57□□□□□ -0.72
SMCO2-201ENST00000298876 BBOX1O75936 387 aa10.56□□□□□ -0.72
SMCO2-201ENST00000298876 HOXA10P31260 410 aaPredicted RBP10.56□□□□□ -0.72
SMCO2-201ENST00000298876 CRY2Q49AN0 593 aa10.56□□□□□ -0.72
SMCO2-201ENST00000298876 DPY19L2Q6NUT2 758 aa10.56□□□□□ -0.72
SMCO2-201ENST00000298876 ZBTB38Q8NAP3 1195 aaPredicted RBP10.56□□□□□ -0.72
SMCO2-201ENST00000298876 ZNF526Q8TF50 670 aaPredicted RBP10.56□□□□□ -0.72
SMCO2-201ENST00000298876 FAM89AQ96GI7 184 aa10.56□□□□□ -0.72
SMCO2-201ENST00000298876 CRAMP1Q96RY5 1269 aa10.56□□□□□ -0.72
SMCO2-201ENST00000298876 ISCA1Q9BUE6 129 aa10.56□□□□□ -0.72
SMCO2-201ENST00000298876 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
SMCO2-201ENST00000298876 CHD4Q14839 1912 aa10.55□□□□□ -0.72
SMCO2-201ENST00000298876 IRS4O14654 1257 aaPredicted RBP10.55□□□□□ -0.72
SMCO2-201ENST00000298876 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
SMCO2-201ENST00000298876 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
SMCO2-201ENST00000298876 RTL5Q5HYW3 569 aaPredicted RBP10.55□□□□□ -0.72
SMCO2-201ENST00000298876 TMC4Q7Z404 712 aa10.55□□□□□ -0.72
SMCO2-201ENST00000298876 C16orf71Q8IYS4 520 aaPredicted RBP10.55□□□□□ -0.72
SMCO2-201ENST00000298876 ZC3H4Q9UPT8 1303 aaKnown RBP10.55□□□□□ -0.72
SMCO2-201ENST00000298876 ABCC12Q96J65 1359 aa10.54□□□□□ -0.72
SMCO2-201ENST00000298876 UTRNP46939 3433 aa10.54□□□□□ -0.72
SMCO2-201ENST00000298876 NUP98P52948 1817 aa10.54□□□□□ -0.72
SMCO2-201ENST00000298876 PCCAP05165 728 aaPredicted RBP10.54□□□□□ -0.72
SMCO2-201ENST00000298876 CT47B1P0C2W7 299 aaPredicted RBP10.54□□□□□ -0.72
SMCO2-201ENST00000298876 HNRNPUQ00839 825 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMCO2-201ENST00000298876 SLFN5Q08AF3 891 aa10.54□□□□□ -0.72
SMCO2-201ENST00000298876 SUPT20HQ8NEM7 779 aa10.54□□□□□ -0.72
SMCO2-201ENST00000298876 DNAAF4Q8WXU2 420 aa10.54□□□□□ -0.72
SMCO2-201ENST00000298876 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
SMCO2-201ENST00000298876 PDE8AO60658 829 aa10.53□□□□□ -0.72
SMCO2-201ENST00000298876 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMCO2-201ENST00000298876 RASSF7Q02833 373 aa10.53□□□□□ -0.72
SMCO2-201ENST00000298876 CCDC152Q4G0S7 254 aa10.53□□□□□ -0.72
SMCO2-201ENST00000298876 LINS1Q8NG48 757 aa10.53□□□□□ -0.72
SMCO2-201ENST00000298876 JDP2Q8WYK2 163 aa10.53□□□□□ -0.72
SMCO2-201ENST00000298876 LTBP3Q9NS15 1303 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms