RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 DCTN1Q14203 1278 aa13.97□□□□□ -0.17
RFC4-201ENST00000296273 DEFB115Q30KQ5 88 aa13.97□□□□□ -0.17
RFC4-201ENST00000296273 PNISRQ8TF01 805 aaKnown RBP13.97□□□□□ -0.17
RFC4-201ENST00000296273 WBP1LQ9NX94 342 aa13.97□□□□□ -0.17
RFC4-201ENST00000296273 RIC1Q4ADV7 1423 aa13.97□□□□□ -0.17
RFC4-201ENST00000296273 SNED1Q8TER0 1413 aa13.97□□□□□ -0.17
RFC4-201ENST00000296273 LAMB4A4D0S4 1761 aa13.97□□□□□ -0.17
RFC4-201ENST00000296273 PPP2R1AP30153 589 aa13.96□□□□□ -0.17
RFC4-201ENST00000296273 OLFM4Q6UX06 510 aa13.96□□□□□ -0.17
RFC4-201ENST00000296273 IBTKQ9P2D0 1353 aaPredicted RBP13.96□□□□□ -0.17
RFC4-201ENST00000296273 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.18
RFC4-201ENST00000296273 MAP2K1Q02750 393 aaPredicted RBP13.96□□□□□ -0.18
RFC4-201ENST00000296273 KIF6Q6ZMV9 814 aa13.96□□□□□ -0.18
RFC4-201ENST00000296273 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.18
RFC4-201ENST00000296273 MAP3K15Q6ZN16 1313 aa13.96□□□□□ -0.18
RFC4-201ENST00000296273 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
RFC4-201ENST00000296273 MAP1SQ66K74 1059 aaPredicted RBP13.95□□□□□ -0.18
RFC4-201ENST00000296273 ABCC12Q96J65 1359 aa13.94□□□□□ -0.18
RFC4-201ENST00000296273 WDR33Q9C0J8 1336 aaKnown RBP13.94□□□□□ -0.18
RFC4-201ENST00000296273 NUTM1Q86Y26 1132 aa13.94□□□□□ -0.18
RFC4-201ENST00000296273 DDX21Q9NR30 783 aaKnown RBP eCLIP13.94□□□□□ -0.18
RFC4-201ENST00000296273 LBX1P52954 281 aa13.93□□□□□ -0.18
RFC4-201ENST00000296273 LARGE2Q8N3Y3 721 aa13.93□□□□□ -0.18
RFC4-201ENST00000296273 NGEFQ8N5V2 710 aa13.93□□□□□ -0.18
RFC4-201ENST00000296273 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
RFC4-201ENST00000296273 CRAMP1Q96RY5 1269 aa13.93□□□□□ -0.18
RFC4-201ENST00000296273 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
RFC4-201ENST00000296273 VPS33BQ9H267 617 aa13.93□□□□□ -0.18
RFC4-201ENST00000296273 MIS18AQ9NYP9 233 aa13.93□□□□□ -0.18
RFC4-201ENST00000296273 ABT1Q9ULW3 272 aaKnown RBP13.93□□□□□ -0.18
RFC4-201ENST00000296273 GJA3Q9Y6H8 435 aa13.93□□□□□ -0.18
RFC4-201ENST00000296273 ERBB4Q15303 1308 aa13.92□□□□□ -0.18
RFC4-201ENST00000296273 ECE1P42892 770 aa13.92□□□□□ -0.18
RFC4-201ENST00000296273 EIF4A1P60842 406 aaKnown RBP13.92□□□□□ -0.18
RFC4-201ENST00000296273 USP50Q70EL3 339 aaPredicted RBP13.92□□□□□ -0.18
RFC4-201ENST00000296273 RRP7AQ9Y3A4 280 aaKnown RBP13.92□□□□□ -0.18
RFC4-201ENST00000296273 KDM3BQ7LBC6 1761 aa13.91□□□□□ -0.18
RFC4-201ENST00000296273 UBN2Q6ZU65 1347 aa13.91□□□□□ -0.18
RFC4-201ENST00000296273 PPEF1O14829 653 aaPredicted RBP13.91□□□□□ -0.18
RFC4-201ENST00000296273 HSPA8P11142 646 aaKnown RBP13.91□□□□□ -0.18
RFC4-201ENST00000296273 SCNN1DP51172 638 aa13.91□□□□□ -0.18
RFC4-201ENST00000296273 TTLL7Q6ZT98 887 aa13.91□□□□□ -0.18
RFC4-201ENST00000296273 PPP1R42Q7Z4L9 355 aa13.91□□□□□ -0.18
RFC4-201ENST00000296273 ZNF34Q8IZ26 560 aa13.91□□□□□ -0.18
RFC4-201ENST00000296273 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
RFC4-201ENST00000296273 NUP98P52948 1817 aa13.91□□□□□ -0.18
RFC4-201ENST00000296273 MYL6BP14649 208 aa13.9□□□□□ -0.18
RFC4-201ENST00000296273 GPTP24298 496 aa13.9□□□□□ -0.18
RFC4-201ENST00000296273 PARP10Q53GL7 1025 aa13.9□□□□□ -0.18
RFC4-201ENST00000296273 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
RFC4-201ENST00000296273 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
RFC4-201ENST00000296273 NIM1KQ8IY84 436 aa13.9□□□□□ -0.18
RFC4-201ENST00000296273 NLRP3Q96P20 1036 aa13.9□□□□□ -0.18
RFC4-201ENST00000296273 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
RFC4-201ENST00000296273 COL4A5P29400 1685 aa13.89□□□□□ -0.19
RFC4-201ENST00000296273 NTSR2O95665 410 aa13.89□□□□□ -0.19
RFC4-201ENST00000296273 EPS15P42566 896 aa13.89□□□□□ -0.19
RFC4-201ENST00000296273 SUPT20HQ8NEM7 779 aa13.89□□□□□ -0.19
RFC4-201ENST00000296273 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
RFC4-201ENST00000296273 LTBP1Q14766 1721 aa13.89□□□□□ -0.19
RFC4-201ENST00000296273 THSD7BQ9C0I4 1608 aa13.88□□□□□ -0.19
RFC4-201ENST00000296273 PPIP5K2O43314 1243 aa13.88□□□□□ -0.19
RFC4-201ENST00000296273 NFE2L2Q16236 605 aa13.88□□□□□ -0.19
RFC4-201ENST00000296273 CAPNS2Q96L46 248 aa13.88□□□□□ -0.19
RFC4-201ENST00000296273 PLEKHF1Q96S99 279 aa13.88□□□□□ -0.19
RFC4-201ENST00000296273 ADARB2Q9NS39 739 aaKnown RBP13.88□□□□□ -0.19
RFC4-201ENST00000296273 PAXIP1Q6ZW49 1069 aaPredicted RBP13.87□□□□□ -0.19
RFC4-201ENST00000296273 ABHD8Q96I13 439 aa13.87□□□□□ -0.19
RFC4-201ENST00000296273 GPR101Q96P66 508 aaPredicted RBP13.87□□□□□ -0.19
RFC4-201ENST00000296273 ATP6V0A2Q9Y487 856 aa13.87□□□□□ -0.19
RFC4-201ENST00000296273 TLL2Q9Y6L7 1015 aa13.87□□□□□ -0.19
RFC4-201ENST00000296273 DLG5Q8TDM6 1919 aa13.87□□□□□ -0.19
RFC4-201ENST00000296273 MAPK8IP3Q9UPT6 1336 aa13.87□□□□□ -0.19
RFC4-201ENST00000296273 MAP2K2P36507 400 aa13.86□□□□□ -0.19
RFC4-201ENST00000296273 SLC10A5Q5PT55 438 aa13.86□□□□□ -0.19
RFC4-201ENST00000296273 UTP14AQ9BVJ6 771 aaKnown RBP13.86□□□□□ -0.19
RFC4-201ENST00000296273 GPRC5DQ9NZD1 345 aa13.86□□□□□ -0.19
RFC4-201ENST00000296273 CDHR2Q9BYE9 1310 aa13.86□□□□□ -0.19
RFC4-201ENST00000296273 TCERG1O14776 1098 aaKnown RBP13.85□□□□□ -0.19
RFC4-201ENST00000296273 BBOX1O75936 387 aa13.85□□□□□ -0.19
RFC4-201ENST00000296273 AOC3Q16853 763 aa13.85□□□□□ -0.19
RFC4-201ENST00000296273 CST9Q5W186 159 aa13.85□□□□□ -0.19
RFC4-201ENST00000296273 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
RFC4-201ENST00000296273 RTFDC1Q9BY42 306 aaPredicted RBP13.85□□□□□ -0.19
RFC4-201ENST00000296273 ZNRF3Q9ULT6 936 aa13.85□□□□□ -0.19
RFC4-201ENST00000296273 HSP90AB3PQ58FF7 597 aa13.84□□□□□ -0.19
RFC4-201ENST00000296273 CYP4F22Q6NT55 531 aa13.84□□□□□ -0.19
RFC4-201ENST00000296273 HHIPL1Q96JK4 782 aa13.84□□□□□ -0.19
RFC4-201ENST00000296273 BABAM1Q9NWV8 329 aa13.84□□□□□ -0.19
RFC4-201ENST00000296273 TSPYL4Q9UJ04 414 aa13.84□□□□□ -0.19
RFC4-201ENST00000296273 CA12O43570 354 aa13.83□□□□□ -0.19
RFC4-201ENST00000296273 FMR1Q06787 632 aaKnown RBP eCLIP13.83□□□□□ -0.19
RFC4-201ENST00000296273 CXCL9Q07325 125 aa13.83□□□□□ -0.19
RFC4-201ENST00000296273 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.19
RFC4-201ENST00000296273 SP8Q8IXZ3 490 aa13.83□□□□□ -0.19
RFC4-201ENST00000296273 ZC3H15Q8WU90 426 aaKnown RBP13.83□□□□□ -0.19
RFC4-201ENST00000296273 THUMPD2Q9BTF0 503 aaKnown RBP13.83□□□□□ -0.19
RFC4-201ENST00000296273 TRPM7Q96QT4 1865 aa13.83□□□□□ -0.19
RFC4-201ENST00000296273 ABCC4O15439 1325 aa13.83□□□□□ -0.2
RFC4-201ENST00000296273 TRAF5O00463 557 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms