RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 NCOA3Q9Y6Q9 1424 aa9.6□□□□□ -0.87
ZIM3-201ENST00000269834 SKIP12755 728 aa9.6□□□□□ -0.87
ZIM3-201ENST00000269834 HDAC1Q13547 482 aaPredicted RBP9.6□□□□□ -0.87
ZIM3-201ENST00000269834 ZKSCAN2Q63HK3 967 aa9.6□□□□□ -0.87
ZIM3-201ENST00000269834 ZFYVE9O95405 1425 aa9.6□□□□□ -0.87
ZIM3-201ENST00000269834 FAM196BA6NMK8 535 aa9.6□□□□□ -0.87
ZIM3-201ENST00000269834 FAM200AQ8TCP9 573 aa9.6□□□□□ -0.87
ZIM3-201ENST00000269834 PRIMPOLQ96LW4 560 aa9.6□□□□□ -0.87
ZIM3-201ENST00000269834 OSBPL2Q9H1P3 480 aa9.6□□□□□ -0.87
ZIM3-201ENST00000269834 NR6A1Q15406 480 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 TMEM106CQ9BVX2 250 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 POGKQ9P215 609 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 EVC2Q86UK5 1308 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 OATP04181 439 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 CD46P15529 392 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 CBLBQ13191 982 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 SETDB2Q96T68 719 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 MKNK1Q9BUB5 465 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 MAGEC2Q9UBF1 373 aaPredicted RBP9.59□□□□□ -0.87
ZIM3-201ENST00000269834 DCTN4Q9UJW0 460 aa9.59□□□□□ -0.87
ZIM3-201ENST00000269834 PREX1Q8TCU6 1659 aa9.58□□□□□ -0.88
ZIM3-201ENST00000269834 ICMTO60725 284 aa9.58□□□□□ -0.88
ZIM3-201ENST00000269834 MTHFSP49914 203 aa9.58□□□□□ -0.88
ZIM3-201ENST00000269834 DZIP1LQ8IYY4 767 aaKnown RBP9.58□□□□□ -0.88
ZIM3-201ENST00000269834 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
ZIM3-201ENST00000269834 SP7Q8TDD2 431 aaPredicted RBP9.58□□□□□ -0.88
ZIM3-201ENST00000269834 JDP2Q8WYK2 163 aa9.58□□□□□ -0.88
ZIM3-201ENST00000269834 RICTORQ6R327 1708 aa9.58□□□□□ -0.88
ZIM3-201ENST00000269834 ARHGAP31Q2M1Z3 1444 aa9.58□□□□□ -0.88
ZIM3-201ENST00000269834 ZNF394Q53GI3 561 aa9.58□□□□□ -0.88
ZIM3-201ENST00000269834 PTMSP20962 102 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 APLP1P51693 650 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 RHBDL3P58872 404 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 NCOA4Q13772 614 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 TSHZ1Q6ZSZ6 1077 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 RAVER1Q8IY67 606 aaKnown RBP9.57□□□□□ -0.88
ZIM3-201ENST00000269834 SLKQ9H2G2 1235 aaPredicted RBP9.57□□□□□ -0.88
ZIM3-201ENST00000269834 SLC12A5Q9H2X9 1139 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 DDX56Q9NY93 547 aaKnown RBP9.57□□□□□ -0.88
ZIM3-201ENST00000269834 DDX19BQ9UMR2 479 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 RPS6KL1Q9Y6S9 549 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 STRCQ7RTU9 1775 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 PPIP5K1Q6PFW1 1433 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 FSD2A1L4K1 749 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 S100BP04271 92 aaPredicted RBP9.57□□□□□ -0.88
ZIM3-201ENST00000269834 DPYDQ12882 1025 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 FTSJ3Q8IY81 847 aaKnown RBP9.57□□□□□ -0.88
ZIM3-201ENST00000269834 TGIF2Q9GZN2 237 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 ISY1Q9ULR0 285 aaKnown RBP9.57□□□□□ -0.88
ZIM3-201ENST00000269834 PCDHGC3Q9UN70 934 aa9.57□□□□□ -0.88
ZIM3-201ENST00000269834 RRP7AQ9Y3A4 280 aaKnown RBP9.57□□□□□ -0.88
ZIM3-201ENST00000269834 RBL2Q08999 1139 aa9.56□□□□□ -0.88
ZIM3-201ENST00000269834 CHMP5Q9NZZ3 219 aa9.56□□□□□ -0.88
ZIM3-201ENST00000269834 TRAK1Q9UPV9 953 aa9.56□□□□□ -0.88
ZIM3-201ENST00000269834 RNF187Q5TA31 235 aaPredicted RBP9.56□□□□□ -0.88
ZIM3-201ENST00000269834 C11orf96Q7Z7L8 435 aa9.56□□□□□ -0.88
ZIM3-201ENST00000269834 TNNQ9UQP3 1299 aa9.56□□□□□ -0.88
ZIM3-201ENST00000269834 CFAP65Q6ZU64 1925 aaKnown RBP9.56□□□□□ -0.88
ZIM3-201ENST00000269834 KIF3CO14782 793 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 MCM4P33991 863 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 LONRF3Q496Y0 759 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 RPS6KC1Q96S38 1066 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 PLEKHF1Q96S99 279 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 C22orf23Q9BZE7 217 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 PARP2Q9UGN5 583 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 DNMT3AQ9Y6K1 912 aaPredicted RBP9.55□□□□□ -0.88
ZIM3-201ENST00000269834 KIF16BQ96L93 1317 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 MYO5BQ9ULV0 1848 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 ATAD2Q6PL18 1390 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 DIP2CQ9Y2E4 1556 aa9.55□□□□□ -0.88
ZIM3-201ENST00000269834 KIF4AO95239 1232 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 SOX11P35716 441 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 EVA1CP58658 441 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 GTF3C2Q8WUA4 911 aaPredicted RBP9.54□□□□□ -0.88
ZIM3-201ENST00000269834 RNF34Q969K3 372 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 A0A1W2PP64 1363 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 LRRC7Q96NW7 1537 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 OS9Q13438 667 aaPredicted RBP9.54□□□□□ -0.88
ZIM3-201ENST00000269834 BIRC2Q13490 618 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 GLIPR1L2Q4G1C9 344 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 ATF7IPQ6VMQ6 1270 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 REM2Q8IYK8 340 aaPredicted RBP9.54□□□□□ -0.88
ZIM3-201ENST00000269834 TSR2Q969E8 191 aaKnown RBP9.54□□□□□ -0.88
ZIM3-201ENST00000269834 WWC3Q9ULE0 1092 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 TMEM131LA2VDJ0 1609 aa9.54□□□□□ -0.88
ZIM3-201ENST00000269834 CD163L1Q9NR16 1453 aa9.53□□□□□ -0.88
ZIM3-201ENST00000269834 PNPLA6Q8IY17 1366 aa9.53□□□□□ -0.88
ZIM3-201ENST00000269834 GOLGA6L3A6NEY3 463 aa9.53□□□□□ -0.88
ZIM3-201ENST00000269834 CFAP99D6REC4 459 aa9.53□□□□□ -0.88
ZIM3-201ENST00000269834 U2AF1L5P0DN76 240 aaPredicted RBP9.53□□□□□ -0.88
ZIM3-201ENST00000269834 TRIM27P14373 513 aa9.53□□□□□ -0.88
ZIM3-201ENST00000269834 U2AF1Q01081 240 aaKnown RBP eCLIP9.53□□□□□ -0.88
ZIM3-201ENST00000269834 AMPD3Q01432 767 aa9.53□□□□□ -0.88
ZIM3-201ENST00000269834 ANKMY2Q8IV38 441 aa9.53□□□□□ -0.88
ZIM3-201ENST00000269834 SLC43A3Q8NBI5 491 aa9.53□□□□□ -0.88
ZIM3-201ENST00000269834 SNX21Q969T3 373 aa9.53□□□□□ -0.88
ZIM3-201ENST00000269834 PNNQ9H307 717 aaKnown RBP9.53□□□□□ -0.88
ZIM3-201ENST00000269834 SMC4Q9NTJ3 1288 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms