RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SAMD15Q9P1V8 674 aa13.82□□□□□ -0.2
SRRM4-201ENST00000267260 STMN1P16949 149 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 RFC1P35251 1148 aaPredicted RBP13.81□□□□□ -0.2
SRRM4-201ENST00000267260 CYLC1P35663 651 aaPredicted RBP13.81□□□□□ -0.2
SRRM4-201ENST00000267260 TMX1Q9H3N1 280 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 TUBBP07437 444 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 STRN4Q9NRL3 753 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 ANKRD50Q9ULJ7 1429 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 TTC36A6NLP5 189 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 KIF5AQ12840 1032 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 IDH1O75874 414 aaKnown RBP13.81□□□□□ -0.2
SRRM4-201ENST00000267260 STARD3NLO95772 234 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 POLR3DP05423 398 aaPredicted RBP13.81□□□□□ -0.2
SRRM4-201ENST00000267260 B4GALNT4Q76KP1 1039 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 CCDC194A0A1B0GVG4 234 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 ALDH3A1P30838 453 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 NBPF11Q86T75 865 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 DAPK1P53355 1430 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 GNG11P61952 73 aa13.81□□□□□ -0.2
SRRM4-201ENST00000267260 SH3BGRP55822 239 aaPredicted RBP13.8□□□□□ -0.2
SRRM4-201ENST00000267260 MCM6Q14566 821 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 CRACR2BQ8N4Y2 399 aaPredicted RBP13.8□□□□□ -0.2
SRRM4-201ENST00000267260 ZSCAN16Q9H4T2 348 aaPredicted RBP13.8□□□□□ -0.2
SRRM4-201ENST00000267260 CCDC40Q4G0X9 1142 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 CCDC94Q9BW85 323 aaPredicted RBP13.8□□□□□ -0.2
SRRM4-201ENST00000267260 MAP3K12Q12852 859 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 ATP2A2P16615 1042 aaKnown RBP13.8□□□□□ -0.2
SRRM4-201ENST00000267260 CPLX4Q7Z7G2 160 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 LIMCH1Q9UPQ0 1083 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 ANKRD30BQ9BXX2 1392 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 CTAGE15A4D2H0 777 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 CTAGE8P0CG41 777 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 CTAGE6Q86UF2 777 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 CTAGE4Q8IX94 777 aa13.8□□□□□ -0.2
SRRM4-201ENST00000267260 ZNF444Q8N0Y2 327 aaPredicted RBP13.8□□□□□ -0.2
SRRM4-201ENST00000267260 ZNF213O14771 459 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 PRC1O43663 620 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 USP25Q9UHP3 1055 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 LMBR1Q8WVP7 490 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 EXOC1Q9NV70 894 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 ARL1P40616 181 aaPredicted RBP13.79□□□□□ -0.2
SRRM4-201ENST00000267260 ERCC6LQ2NKX8 1250 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 GOLGA1Q92805 767 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 TSGA10Q9BZW7 698 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 TRIM7Q9C029 511 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 NDC80O14777 642 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 FSIP1Q8NA03 581 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 STX6O43752 255 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 METTL24Q5JXM2 366 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 PPP1R9BQ96SB3 815 aa13.79□□□□□ -0.2
SRRM4-201ENST00000267260 BCAR3O75815 825 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 ATP5DP30049 168 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 ERBINQ96RT1 1412 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 NLRP5P59047 1200 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.78□□□□□ -0.2
SRRM4-201ENST00000267260 FAM114A2Q9NRY5 505 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 EFCAB5A4FU69 1503 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 BMP15O95972 392 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 PCK1P35558 622 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 UTP14AQ9BVJ6 771 aaKnown RBP13.78□□□□□ -0.2
SRRM4-201ENST00000267260 FAM135AQ9P2D6 1515 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 ZBTB17Q13105 803 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 CCDC63Q8NA47 563 aa13.78□□□□□ -0.2
SRRM4-201ENST00000267260 SNX16P57768 344 aa13.77□□□□□ -0.2
SRRM4-201ENST00000267260 CNGA1P29973 690 aa13.77□□□□□ -0.2
SRRM4-201ENST00000267260 TSNAXIP1Q2TAA8 658 aa13.77□□□□□ -0.2
SRRM4-201ENST00000267260 SEPT14Q6ZU15 432 aa13.77□□□□□ -0.2
SRRM4-201ENST00000267260 A6NNZ2 444 aa13.77□□□□□ -0.2
SRRM4-201ENST00000267260 GAS8O95995 478 aa13.77□□□□□ -0.2
SRRM4-201ENST00000267260 MX1P20591 662 aa13.77□□□□□ -0.2
SRRM4-201ENST00000267260 TTF1Q15361 905 aaPredicted RBP13.77□□□□□ -0.2
SRRM4-201ENST00000267260 TUBB8Q3ZCM7 444 aa13.77□□□□□ -0.2
SRRM4-201ENST00000267260 TCERG1LQ5VWI1 586 aa13.77□□□□□ -0.2
SRRM4-201ENST00000267260 PPFIA2O75334 1257 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.77□□□□□ -0.21
SRRM4-201ENST00000267260 CPLX3Q8WVH0 158 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 TXNDC16Q9P2K2 825 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 MINDY4BA8MYZ0 360 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 C10orf67Q8IYJ2 551 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 ARFGAP2Q8N6H7 521 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 BUB1BO60566 1050 aaPredicted RBP13.77□□□□□ -0.21
SRRM4-201ENST00000267260 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.21
SRRM4-201ENST00000267260 NUTM2GQ5VZR2 741 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 EPSTI1Q96J88 318 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 GOLGA8BA8MQT2 603 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 VCXQ9H320 206 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 ABCF2Q9UG63 623 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.21
SRRM4-201ENST00000267260 SULT6B1Q6IMI4 303 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 CFAP157Q5JU67 520 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 CLNS1AP54105 237 aaKnown RBP13.76□□□□□ -0.21
SRRM4-201ENST00000267260 VPS18Q9P253 973 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 ESCO1Q5FWF5 840 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 CCDC144CPQ8IYA2 1237 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 SELENOSQ9BQE4 189 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 NUF2Q9BZD4 464 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 ERMNQ8TAM6 284 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms