RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 SLC4A10Q6U841 1118 aa20.91■□□□□ 0.94
SNRPF-201ENST00000266735 FRAT1Q92837 279 aaPredicted RBP20.91■□□□□ 0.94
SNRPF-201ENST00000266735 TRMT112Q9UI30 125 aaKnown RBP20.91■□□□□ 0.94
SNRPF-201ENST00000266735 ARFGEF2Q9Y6D5 1785 aa20.9■□□□□ 0.94
SNRPF-201ENST00000266735 CWF19L2Q2TBE0 894 aaKnown RBP20.9■□□□□ 0.94
SNRPF-201ENST00000266735 ZKSCAN2Q63HK3 967 aa20.9■□□□□ 0.94
SNRPF-201ENST00000266735 ATF7IPQ6VMQ6 1270 aa20.89■□□□□ 0.93
SNRPF-201ENST00000266735 NUTM1Q86Y26 1132 aa20.89■□□□□ 0.93
SNRPF-201ENST00000266735 BRIP1Q9BX63 1249 aa20.89■□□□□ 0.93
SNRPF-201ENST00000266735 SH3TC1Q8TE82 1336 aa20.89■□□□□ 0.93
SNRPF-201ENST00000266735 PXDNLA1KZ92 1463 aa20.89■□□□□ 0.93
SNRPF-201ENST00000266735 CACNA1FO60840 1977 aa20.89■□□□□ 0.93
SNRPF-201ENST00000266735 NUP98P52948 1817 aa20.89■□□□□ 0.93
SNRPF-201ENST00000266735 SRCAPQ6ZRS2 3230 aa20.89■□□□□ 0.93
SNRPF-201ENST00000266735 NRXN2Q9P2S2 1712 aa20.88■□□□□ 0.93
SNRPF-201ENST00000266735 ALDH1L1O75891 902 aa20.88■□□□□ 0.93
SNRPF-201ENST00000266735 TGFB2P61812 414 aa20.88■□□□□ 0.93
SNRPF-201ENST00000266735 ERFEQ4G0M1 354 aa20.88■□□□□ 0.93
SNRPF-201ENST00000266735 ZBTB38Q8NAP3 1195 aaPredicted RBP20.88■□□□□ 0.93
SNRPF-201ENST00000266735 SYT17Q9BSW7 474 aa20.88■□□□□ 0.93
SNRPF-201ENST00000266735 SRCIN1Q9C0H9 1055 aa20.88■□□□□ 0.93
SNRPF-201ENST00000266735 TRIM27P14373 513 aa20.87■□□□□ 0.93
SNRPF-201ENST00000266735 PDE6BP35913 854 aa20.87■□□□□ 0.93
SNRPF-201ENST00000266735 GCKRQ14397 625 aa20.87■□□□□ 0.93
SNRPF-201ENST00000266735 CCDC24Q8N4L8 307 aa20.87■□□□□ 0.93
SNRPF-201ENST00000266735 PCCAP05165 728 aaPredicted RBP20.86■□□□□ 0.93
SNRPF-201ENST00000266735 PDZRN3Q9UPQ7 1066 aa20.86■□□□□ 0.93
SNRPF-201ENST00000266735 ABCC12Q96J65 1359 aa20.86■□□□□ 0.93
SNRPF-201ENST00000266735 RIC1Q4ADV7 1423 aa20.86■□□□□ 0.93
SNRPF-201ENST00000266735 ANKRD36CQ5JPF3 1778 aa20.85■□□□□ 0.93
SNRPF-201ENST00000266735 HSP90B1P14625 803 aaKnown RBP20.85■□□□□ 0.93
SNRPF-201ENST00000266735 CCT4P50991 539 aaKnown RBP20.85■□□□□ 0.93
SNRPF-201ENST00000266735 SLC10A5Q5PT55 438 aa20.85■□□□□ 0.93
SNRPF-201ENST00000266735 FAM89AQ96GI7 184 aa20.85■□□□□ 0.93
SNRPF-201ENST00000266735 ABCC4O15439 1325 aa20.85■□□□□ 0.93
SNRPF-201ENST00000266735 NLGN2Q8NFZ4 835 aa20.84■□□□□ 0.93
SNRPF-201ENST00000266735 KLRG2A4D1S0 409 aaPredicted RBP20.83■□□□□ 0.92
SNRPF-201ENST00000266735 H7C1W4 665 aa20.83■□□□□ 0.92
SNRPF-201ENST00000266735 IRS4O14654 1257 aaPredicted RBP20.83■□□□□ 0.92
SNRPF-201ENST00000266735 RTL5Q5HYW3 569 aaPredicted RBP20.83■□□□□ 0.92
SNRPF-201ENST00000266735 SYNE4Q8N205 404 aa20.83■□□□□ 0.92
SNRPF-201ENST00000266735 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.83■□□□□ 0.92
SNRPF-201ENST00000266735 NLRP3Q96P20 1036 aa20.83■□□□□ 0.92
SNRPF-201ENST00000266735 CDHR2Q9BYE9 1310 aa20.83■□□□□ 0.92
SNRPF-201ENST00000266735 H0YIN7 160 aa20.82■□□□□ 0.92
SNRPF-201ENST00000266735 GRM8O00222 908 aa20.82■□□□□ 0.92
SNRPF-201ENST00000266735 INTS3Q68E01 1043 aaKnown RBP20.82■□□□□ 0.92
SNRPF-201ENST00000266735 C2CD5Q86YS7 1000 aa20.82■□□□□ 0.92
SNRPF-201ENST00000266735 FTSJ3Q8IY81 847 aaKnown RBP20.82■□□□□ 0.92
SNRPF-201ENST00000266735 CLUAP1Q96AJ1 413 aa20.82■□□□□ 0.92
SNRPF-201ENST00000266735 MS4A1P11836 297 aa20.81■□□□□ 0.92
SNRPF-201ENST00000266735 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
SNRPF-201ENST00000266735 DPEP1P16444 411 aa20.81■□□□□ 0.92
SNRPF-201ENST00000266735 AFDNP55196 1824 aaKnown RBP20.81■□□□□ 0.92
SNRPF-201ENST00000266735 UBE3BQ7Z3V4 1068 aa20.81■□□□□ 0.92
SNRPF-201ENST00000266735 DZIP1LQ8IYY4 767 aaKnown RBP20.81■□□□□ 0.92
SNRPF-201ENST00000266735 C9orf78Q9NZ63 289 aaPredicted RBP20.81■□□□□ 0.92
SNRPF-201ENST00000266735 A0A0G2JLW4 131 aa20.8■□□□□ 0.92
SNRPF-201ENST00000266735 CHRNA5P30532 468 aa20.8■□□□□ 0.92
SNRPF-201ENST00000266735 CRY2Q49AN0 593 aa20.8■□□□□ 0.92
SNRPF-201ENST00000266735 TNNQ9UQP3 1299 aa20.8■□□□□ 0.92
SNRPF-201ENST00000266735 SRGNP10124 158 aa20.79■□□□□ 0.92
SNRPF-201ENST00000266735 CASP7P55210 303 aa20.79■□□□□ 0.92
SNRPF-201ENST00000266735 JARID2Q92833 1246 aaPredicted RBP20.79■□□□□ 0.92
SNRPF-201ENST00000266735 UTYO14607 1347 aa20.78■□□□□ 0.92
SNRPF-201ENST00000266735 PDE8AO60658 829 aa20.78■□□□□ 0.92
SNRPF-201ENST00000266735 KCNA3P22001 575 aa20.78■□□□□ 0.92
SNRPF-201ENST00000266735 MASTLQ96GX5 879 aa20.78■□□□□ 0.92
SNRPF-201ENST00000266735 KIF13BQ9NQT8 1826 aa20.78■□□□□ 0.92
SNRPF-201ENST00000266735 NPR1P16066 1061 aa20.77■□□□□ 0.92
SNRPF-201ENST00000266735 STYK1Q6J9G0 422 aa20.77■□□□□ 0.92
SNRPF-201ENST00000266735 C3orf67Q6ZVT6 689 aa20.77■□□□□ 0.92
SNRPF-201ENST00000266735 TMEM57Q8N5G2 664 aa20.77■□□□□ 0.92
SNRPF-201ENST00000266735 PLA2G12BQ9BX93 195 aa20.77■□□□□ 0.92
SNRPF-201ENST00000266735 PLIN1O60240 522 aa20.76■□□□□ 0.91
SNRPF-201ENST00000266735 SF3B3Q15393 1217 aaKnown RBP20.76■□□□□ 0.91
SNRPF-201ENST00000266735 RPGRQ92834 1020 aaKnown RBP20.76■□□□□ 0.91
SNRPF-201ENST00000266735 USP44Q9H0E7 712 aa20.76■□□□□ 0.91
SNRPF-201ENST00000266735 PIM2Q9P1W9 311 aa20.76■□□□□ 0.91
SNRPF-201ENST00000266735 NBPF7P0C2Y1 421 aaPredicted RBP20.75■□□□□ 0.91
SNRPF-201ENST00000266735 ZNF622Q969S3 477 aaKnown RBP eCLIP20.75■□□□□ 0.911e-8■□□□□ 10.8
SNRPF-201ENST00000266735 RLBP1P12271 317 aa20.74■□□□□ 0.91
SNRPF-201ENST00000266735 HOXA10P31260 410 aaPredicted RBP20.74■□□□□ 0.91
SNRPF-201ENST00000266735 CTSWP56202 376 aa20.74■□□□□ 0.91
SNRPF-201ENST00000266735 PDE3AQ14432 1141 aa20.74■□□□□ 0.91
SNRPF-201ENST00000266735 CNKSR1Q969H4 720 aa20.74■□□□□ 0.91
SNRPF-201ENST00000266735 RBM17Q96I25 401 aaKnown RBP20.74■□□□□ 0.91
SNRPF-201ENST00000266735 TNRC6CQ9HCJ0 1690 aaKnown RBP20.74■□□□□ 0.91
SNRPF-201ENST00000266735 ALDH1B1P30837 517 aa20.73■□□□□ 0.91
SNRPF-201ENST00000266735 RRP1P56182 461 aaKnown RBP20.73■□□□□ 0.91
SNRPF-201ENST00000266735 CCDC152Q4G0S7 254 aa20.73■□□□□ 0.91
SNRPF-201ENST00000266735 PANK1Q8TE04 598 aa20.73■□□□□ 0.91
SNRPF-201ENST00000266735 HDAC5Q9UQL6 1122 aa20.73■□□□□ 0.91
SNRPF-201ENST00000266735 DALRD3Q5D0E6 543 aaKnown RBP20.72■□□□□ 0.91
SNRPF-201ENST00000266735 ITPRIPQ8IWB1 547 aa20.72■□□□□ 0.91
SNRPF-201ENST00000266735 TTLL6Q8N841 843 aa20.72■□□□□ 0.91
SNRPF-201ENST00000266735 CRAMP1Q96RY5 1269 aa20.72■□□□□ 0.91
SNRPF-201ENST00000266735 ANKRD31Q8N7Z5 1873 aa20.72■□□□□ 0.91
SNRPF-201ENST00000266735 GNAI3P08754 354 aa20.72■□□□□ 0.91
SNRPF-201ENST00000266735 UBTFL1P0CB47 393 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms