RNA–Protein interactions for RNA: ENST00000265997.4

CPEB3-201, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPEB3, Length 4,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-201ENST00000265997 ANKIB1Q9P2G1 1089 aa17.59■□□□□ 0.41
CPEB3-201ENST00000265997 C19orf44Q9H6X5 657 aa17.59■□□□□ 0.41
CPEB3-201ENST00000265997 GDPD2Q9HCC8 539 aa17.59■□□□□ 0.41
CPEB3-201ENST00000265997 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
CPEB3-201ENST00000265997 EPB41L2O43491 1005 aaKnown RBP17.59■□□□□ 0.41
CPEB3-201ENST00000265997 CWC15Q9P013 229 aaKnown RBP17.59■□□□□ 0.41
CPEB3-201ENST00000265997 ORC3Q9UBD5 711 aaPredicted RBP17.59■□□□□ 0.41
CPEB3-201ENST00000265997 HOXB7P09629 217 aa17.59■□□□□ 0.41
CPEB3-201ENST00000265997 STX1AQ16623 288 aa17.59■□□□□ 0.41
CPEB3-201ENST00000265997 LARP6Q9BRS8 491 aaKnown RBP17.59■□□□□ 0.41
CPEB3-201ENST00000265997 SNRKQ9NRH2 765 aa17.59■□□□□ 0.41
CPEB3-201ENST00000265997 ZSCAN12O43309 604 aa17.58■□□□□ 0.41
CPEB3-201ENST00000265997 ADAMTS2O95450 1211 aa17.58■□□□□ 0.41
CPEB3-201ENST00000265997 SF3B2Q13435 895 aaKnown RBP17.58■□□□□ 0.41
CPEB3-201ENST00000265997 MCMDC2Q4G0Z9 681 aa17.58■□□□□ 0.41
CPEB3-201ENST00000265997 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.41
CPEB3-201ENST00000265997 C16orf71Q8IYS4 520 aaPredicted RBP17.58■□□□□ 0.41
CPEB3-201ENST00000265997 ABCA8O94911 1581 aa17.58■□□□□ 0.41
CPEB3-201ENST00000265997 IQCEQ6IPM2 695 aa17.58■□□□□ 0.4
CPEB3-201ENST00000265997 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.4
CPEB3-201ENST00000265997 ZNF444Q8N0Y2 327 aaPredicted RBP17.58■□□□□ 0.4
CPEB3-201ENST00000265997 USP25Q9UHP3 1055 aa17.58■□□□□ 0.4
CPEB3-201ENST00000265997 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.4
CPEB3-201ENST00000265997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.58■□□□□ 0.4
CPEB3-201ENST00000265997 RBM10P98175 930 aaKnown RBP17.58■□□□□ 0.4
CPEB3-201ENST00000265997 TMEM67Q5HYA8 995 aa17.58■□□□□ 0.4
CPEB3-201ENST00000265997 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.4
CPEB3-201ENST00000265997 GCP02774 474 aa17.58■□□□□ 0.4
CPEB3-201ENST00000265997 SSBP05455 408 aaKnown RBP eCLIP17.58■□□□□ 0.4
CPEB3-201ENST00000265997 KDM5AP29375 1690 aaKnown RBP17.57■□□□□ 0.4
CPEB3-201ENST00000265997 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 LMBR1LQ6UX01 489 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 RAD50Q92878 1312 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 LDHCP07864 332 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 METAP2P50579 478 aaKnown RBP eCLIP17.57■□□□□ 0.4
CPEB3-201ENST00000265997 PIBF1Q8WXW3 757 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 TFIP11Q9UBB9 837 aaKnown RBP17.57■□□□□ 0.4
CPEB3-201ENST00000265997 CLIP2Q9UDT6 1046 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 EIF5P55010 431 aaKnown RBP17.57■□□□□ 0.4
CPEB3-201ENST00000265997 ZSCAN23Q3MJ62 389 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 LRSAM1Q6UWE0 723 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 MFSD6Q6ZSS7 791 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 RAB34Q9BZG1 259 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
CPEB3-201ENST00000265997 PTPN14Q15678 1187 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 CCDC152Q4G0S7 254 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 ARHGAP29Q52LW3 1261 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 ZFYVE27Q5T4F4 411 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 CCDC181Q5TID7 509 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 CNNM3Q8NE01 707 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 BRF1Q92994 677 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 CCDC66A2RUB6 948 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 KCNA6P17658 529 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 KRT24Q2M2I5 525 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 PYM1Q9BRP8 204 aaKnown RBP17.56■□□□□ 0.4
CPEB3-201ENST00000265997 ATP2B3Q16720 1220 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 LRRC59Q96AG4 307 aaKnown RBP17.56■□□□□ 0.4
CPEB3-201ENST00000265997 GSDMDP57764 484 aa17.56■□□□□ 0.4
CPEB3-201ENST00000265997 CHL1O00533 1208 aa17.55■□□□□ 0.4
CPEB3-201ENST00000265997 KIF5BP33176 963 aa17.55■□□□□ 0.4
CPEB3-201ENST00000265997 PDCL2Q8N4E4 241 aa17.55■□□□□ 0.4
CPEB3-201ENST00000265997 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
CPEB3-201ENST00000265997 FAM177A1Q8N128 213 aaPredicted RBP17.55■□□□□ 0.4
CPEB3-201ENST00000265997 INTS4Q96HW7 963 aaKnown RBP17.55■□□□□ 0.4
CPEB3-201ENST00000265997 RPGRQ92834 1020 aaKnown RBP17.55■□□□□ 0.4
CPEB3-201ENST00000265997 CCDC194A0A1B0GVG4 234 aa17.55■□□□□ 0.4
CPEB3-201ENST00000265997 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
CPEB3-201ENST00000265997 EIF3JO75822 258 aaKnown RBP17.55■□□□□ 0.4
CPEB3-201ENST00000265997 TOP1P11387 765 aaKnown RBP17.55■□□□□ 0.4
CPEB3-201ENST00000265997 ZNF76P36508 570 aa17.55■□□□□ 0.4
CPEB3-201ENST00000265997 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
CPEB3-201ENST00000265997 ZNF397Q8NF99 534 aaPredicted RBP17.55■□□□□ 0.4
CPEB3-201ENST00000265997 PRM3Q9NNZ6 103 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 CFAP74Q9C0B2 1584 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 HAND2P61296 217 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 PDE4BQ07343 736 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 ZNF165P49910 485 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
CPEB3-201ENST00000265997 SIRT1Q96EB6 747 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 KRT23Q9C075 422 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 ERLIN2O94905 339 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 NLRP5P59047 1200 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 KANK3Q6NY19 840 aa17.54■□□□□ 0.4
CPEB3-201ENST00000265997 JARID2Q92833 1246 aaPredicted RBP17.54■□□□□ 0.4
CPEB3-201ENST00000265997 DDX21Q9NR30 783 aaKnown RBP eCLIP17.54■□□□□ 0.4
CPEB3-201ENST00000265997 NCKAP5LQ9HCH0 1330 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 TMTC2Q8N394 836 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 KIF18AQ8NI77 898 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 CNNM2Q9H8M5 875 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 IL2RBP14784 551 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 MICU3Q86XE3 530 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 RRP9O43818 475 aaKnown RBP17.53■□□□□ 0.4
CPEB3-201ENST00000265997 BAG3O95817 575 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 CHMLP26374 656 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 CRACR2BQ8N4Y2 399 aaPredicted RBP17.53■□□□□ 0.4
CPEB3-201ENST00000265997 UBXN4Q92575 508 aa17.53■□□□□ 0.4
CPEB3-201ENST00000265997 RBM25P49756 843 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms