RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 TOP1P11387 765 aaKnown RBP12.32□□□□□ -0.44
KPNA3-201ENST00000261667 ACTN2P35609 894 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 TUBB4AP04350 444 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 WHAMMP3Q1A5X7 153 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 FAM76AQ8TAV0 307 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 C1orf115Q9H7X2 142 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 NRXN1Q9ULB1 1477 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 SYNMO15061 1565 aa12.32□□□□□ -0.44
KPNA3-201ENST00000261667 NUTM1Q86Y26 1132 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
KPNA3-201ENST00000261667 CCDC50Q8IVM0 306 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 TCHPQ9BT92 498 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 AGLP35573 1532 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 USP48Q86UV5 1035 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 CCDC150Q8NCX0 1101 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 A0A087WUV0 522 aaPredicted RBP12.31□□□□□ -0.44
KPNA3-201ENST00000261667 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 PSMD2Q13200 908 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 WWC2Q6AWC2 1192 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 UGGT1Q9NYU2 1555 aa12.31□□□□□ -0.44
KPNA3-201ENST00000261667 ANKRD65E5RJM6 399 aa12.3□□□□□ -0.44
KPNA3-201ENST00000261667 TRIM66O15016 1216 aa12.3□□□□□ -0.44
KPNA3-201ENST00000261667 ANAPC15P60006 121 aa12.3□□□□□ -0.44
KPNA3-201ENST00000261667 YEATS2Q9ULM3 1422 aa12.3□□□□□ -0.44
KPNA3-201ENST00000261667 ANO6Q4KMQ2 910 aa12.3□□□□□ -0.44
KPNA3-201ENST00000261667 NBPF6Q5VWK0 638 aa12.3□□□□□ -0.44
KPNA3-201ENST00000261667 NBPF5PQ86XG9 351 aaPredicted RBP12.3□□□□□ -0.44
KPNA3-201ENST00000261667 NBPF4Q96M43 638 aa12.3□□□□□ -0.44
KPNA3-201ENST00000261667 ERCC3P19447 782 aa12.3□□□□□ -0.44
KPNA3-201ENST00000261667 ARHGAP25P42331 645 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 FAM114A1Q8IWE2 563 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 KIF3BO15066 747 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 RPSAP08865 295 aaKnown RBP12.29□□□□□ -0.44
KPNA3-201ENST00000261667 SEPT6Q14141 434 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 STK38Q15208 465 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 LRRC23Q53EV4 343 aaPredicted RBP12.29□□□□□ -0.44
KPNA3-201ENST00000261667 CARD6Q9BX69 1037 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 SPECC1LQ69YQ0 1117 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 SEPT14Q6ZU15 432 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 DDX19AQ9NUU7 478 aaKnown RBP12.29□□□□□ -0.44
KPNA3-201ENST00000261667 ARHGAP31Q2M1Z3 1444 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 CTAGE15A4D2H0 777 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 CTAGE8P0CG41 777 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 CTAGE6Q86UF2 777 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 CTAGE4Q8IX94 777 aa12.29□□□□□ -0.44
KPNA3-201ENST00000261667 API5Q9BZZ5 524 aaKnown RBP12.29□□□□□ -0.44
KPNA3-201ENST00000261667 NPATQ14207 1427 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 MYOM2P54296 1465 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
KPNA3-201ENST00000261667 ARHGEF40Q8TER5 1519 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 PCK1P35558 622 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 GYS2P54840 703 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 CPLX1O14810 134 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 RHOXF2BP0C7M4 288 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 TXLNAP40222 546 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 ARMCX6Q7L4S7 300 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 RHOXF2Q9BQY4 288 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 PPP1R12CQ9BZL4 782 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 NOS1P29475 1434 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 PREX1Q8TCU6 1659 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 ATP2B1P20020 1258 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 SLFN5Q08AF3 891 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 ZNF396Q96N95 335 aaPredicted RBP12.28□□□□□ -0.44
KPNA3-201ENST00000261667 SH3GL3Q99963 347 aa12.28□□□□□ -0.44
KPNA3-201ENST00000261667 ARMC2Q8NEN0 867 aa12.27□□□□□ -0.44
KPNA3-201ENST00000261667 STK26Q9P289 416 aa12.27□□□□□ -0.44
KPNA3-201ENST00000261667 CCDC160A6NGH7 325 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 CAVIN2O95810 425 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 CCDC6Q16204 474 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 LMNTD2Q8IXW0 634 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 SCAND2PQ9GZW5 306 aaPredicted RBP12.27□□□□□ -0.45
KPNA3-201ENST00000261667 BAIAP2L1Q9UHR4 511 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.45
KPNA3-201ENST00000261667 IRX1P78414 480 aaPredicted RBP12.27□□□□□ -0.45
KPNA3-201ENST00000261667 TRDNQ13061 729 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 PRPF38AQ8NAV1 312 aaKnown RBP12.27□□□□□ -0.45
KPNA3-201ENST00000261667 RUNDC1Q96C34 613 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 CABS1Q96KC9 395 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 SYCP1Q15431 976 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 FBXO18Q8NFZ0 1043 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
KPNA3-201ENST00000261667 OPA1O60313 960 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 HSF2BPO75031 334 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 RANBP1P43487 201 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
KPNA3-201ENST00000261667 CTCFLQ8NI51 663 aaPredicted RBP12.26□□□□□ -0.45
KPNA3-201ENST00000261667 CTNNA3Q9UI47 895 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 RAD50Q92878 1312 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 EIF3CLB5ME19 914 aaKnown RBP12.26□□□□□ -0.45
KPNA3-201ENST00000261667 PPP1R12AO14974 1030 aaPredicted RBP12.26□□□□□ -0.45
KPNA3-201ENST00000261667 TBC1D9Q6ZT07 1266 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 EIF3CQ99613 913 aaKnown RBP12.26□□□□□ -0.45
KPNA3-201ENST00000261667 PFDN1O60925 122 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 MAATS1Q7Z4T9 603 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 SAAL1Q96ER3 474 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 LMBRD1Q9NUN5 540 aa12.26□□□□□ -0.45
KPNA3-201ENST00000261667 MYO3AQ8NEV4 1616 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms