RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 PARP10Q53GL7 1025 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 DPY19L2Q6NUT2 758 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 LRP10Q7Z4F1 713 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 PPP1R42Q7Z4L9 355 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 ZNF34Q8IZ26 560 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 C7orf43Q8WVR3 580 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 WDR90Q96KV7 1748 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 UBN2Q6ZU65 1347 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 VEGFAP15692 232 aaPredicted RBP12.06□□□□□ -0.48
LIN7A-201ENST00000261203 CALD1Q05682 793 aaKnown RBP12.06□□□□□ -0.48
LIN7A-201ENST00000261203 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
LIN7A-201ENST00000261203 RTKN2Q8IZC4 609 aa12.06□□□□□ -0.48
LIN7A-201ENST00000261203 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
LIN7A-201ENST00000261203 DDX21Q9NR30 783 aaKnown RBP eCLIP12.06□□□□□ -0.48
LIN7A-201ENST00000261203 LAS1LQ9Y4W2 734 aaKnown RBP12.06□□□□□ -0.48
LIN7A-201ENST00000261203 RNF123Q5XPI4 1314 aa12.06□□□□□ -0.48
LIN7A-201ENST00000261203 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
LIN7A-201ENST00000261203 NTSR2O95665 410 aa12.05□□□□□ -0.48
LIN7A-201ENST00000261203 PROSER3Q2NL68 480 aa12.05□□□□□ -0.48
LIN7A-201ENST00000261203 HSP90AB3PQ58FF7 597 aa12.05□□□□□ -0.48
LIN7A-201ENST00000261203 SUSD4Q5VX71 490 aa12.05□□□□□ -0.48
LIN7A-201ENST00000261203 RPGRQ92834 1020 aaKnown RBP12.05□□□□□ -0.48
LIN7A-201ENST00000261203 ANXA1P04083 346 aa12.04□□□□□ -0.48
LIN7A-201ENST00000261203 FKBP4Q02790 459 aaKnown RBP eCLIP12.04□□□□□ -0.48
LIN7A-201ENST00000261203 COPS6Q7L5N1 327 aa12.04□□□□□ -0.48
LIN7A-201ENST00000261203 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
LIN7A-201ENST00000261203 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
LIN7A-201ENST00000261203 LAMB2P55268 1798 aa12.03□□□□□ -0.48
LIN7A-201ENST00000261203 SCN4AP35499 1836 aa12.03□□□□□ -0.48
LIN7A-201ENST00000261203 APAF1O14727 1248 aa12.03□□□□□ -0.48
LIN7A-201ENST00000261203 HOXA10P31260 410 aaPredicted RBP12.03□□□□□ -0.48
LIN7A-201ENST00000261203 KRT24Q2M2I5 525 aa12.03□□□□□ -0.48
LIN7A-201ENST00000261203 GRIPAP1Q4V328 841 aa12.03□□□□□ -0.48
LIN7A-201ENST00000261203 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
LIN7A-201ENST00000261203 CC2D2BQ6DHV5 1058 aa12.03□□□□□ -0.48
LIN7A-201ENST00000261203 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
LIN7A-201ENST00000261203 RBM17Q96I25 401 aaKnown RBP12.03□□□□□ -0.48
LIN7A-201ENST00000261203 UTP14AQ9BVJ6 771 aaKnown RBP12.03□□□□□ -0.48
LIN7A-201ENST00000261203 IFT57Q9NWB7 429 aa12.03□□□□□ -0.48
LIN7A-201ENST00000261203 DBF4Q9UBU7 674 aaPredicted RBP12.03□□□□□ -0.48
LIN7A-201ENST00000261203 ZNF853P0CG23 659 aa12.02□□□□□ -0.49
LIN7A-201ENST00000261203 GNAI1P63096 354 aa12.02□□□□□ -0.49
LIN7A-201ENST00000261203 AIMP1Q12904 312 aaKnown RBP12.02□□□□□ -0.49
LIN7A-201ENST00000261203 NLRP3Q96P20 1036 aa12.02□□□□□ -0.49
LIN7A-201ENST00000261203 CRAMP1Q96RY5 1269 aa12.02□□□□□ -0.49
LIN7A-201ENST00000261203 MBIPQ9NS73 344 aa12.02□□□□□ -0.49
LIN7A-201ENST00000261203 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.49
LIN7A-201ENST00000261203 TCIRG1Q13488 830 aa12.01□□□□□ -0.49
LIN7A-201ENST00000261203 SLC10A5Q5PT55 438 aa12.01□□□□□ -0.49
LIN7A-201ENST00000261203 DUSP27Q5VZP5 1158 aa12.01□□□□□ -0.49
LIN7A-201ENST00000261203 PLBD2Q8NHP8 589 aa12.01□□□□□ -0.49
LIN7A-201ENST00000261203 PSMD1Q99460 953 aa12.01□□□□□ -0.49
LIN7A-201ENST00000261203 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
LIN7A-201ENST00000261203 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
LIN7A-201ENST00000261203 SNED1Q8TER0 1413 aa12.01□□□□□ -0.49
LIN7A-201ENST00000261203 POTECB2RU33 542 aa12□□□□□ -0.49
LIN7A-201ENST00000261203 OLFM4Q6UX06 510 aa12□□□□□ -0.49
LIN7A-201ENST00000261203 NLRP10Q86W26 655 aa12□□□□□ -0.49
LIN7A-201ENST00000261203 ZNF277Q9NRM2 450 aaPredicted RBP12□□□□□ -0.49
LIN7A-201ENST00000261203 IQCA1LA6NCM1 817 aa11.99□□□□□ -0.49
LIN7A-201ENST00000261203 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
LIN7A-201ENST00000261203 IARSP41252 1262 aaKnown RBP11.99□□□□□ -0.49
LIN7A-201ENST00000261203 ANKRD13DQ6ZTN6 518 aa11.99□□□□□ -0.49
LIN7A-201ENST00000261203 TNS4Q8IZW8 715 aa11.99□□□□□ -0.49
LIN7A-201ENST00000261203 SYNE4Q8N205 404 aa11.99□□□□□ -0.49
LIN7A-201ENST00000261203 L3MBTL3Q96JM7 780 aaPredicted RBP11.99□□□□□ -0.49
LIN7A-201ENST00000261203 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
LIN7A-201ENST00000261203 TRMT112Q9UI30 125 aaKnown RBP11.99□□□□□ -0.49
LIN7A-201ENST00000261203 SH3TC1Q8TE82 1336 aa11.99□□□□□ -0.49
LIN7A-201ENST00000261203 DDX60Q8IY21 1712 aaKnown RBP11.99□□□□□ -0.49
LIN7A-201ENST00000261203 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
LIN7A-201ENST00000261203 DDNO94850 711 aaPredicted RBP11.98□□□□□ -0.49
LIN7A-201ENST00000261203 C3orf67Q6ZVT6 689 aa11.98□□□□□ -0.49
LIN7A-201ENST00000261203 JDP2Q8WYK2 163 aa11.98□□□□□ -0.49
LIN7A-201ENST00000261203 FZD9O00144 591 aa11.97□□□□□ -0.49
LIN7A-201ENST00000261203 ANP32CO43423 234 aa11.97□□□□□ -0.49
LIN7A-201ENST00000261203 CCDC27Q2M243 656 aa11.97□□□□□ -0.49
LIN7A-201ENST00000261203 ATP6V0A2Q9Y487 856 aa11.97□□□□□ -0.49
LIN7A-201ENST00000261203 CACNA1FO60840 1977 aa11.96□□□□□ -0.49
LIN7A-201ENST00000261203 TAF1P21675 1872 aa11.96□□□□□ -0.49
LIN7A-201ENST00000261203 ABCC4O15439 1325 aa11.96□□□□□ -0.49
LIN7A-201ENST00000261203 ZNF541Q9H0D2 1346 aa11.96□□□□□ -0.49
LIN7A-201ENST00000261203 BBOX1O75936 387 aa11.96□□□□□ -0.49
LIN7A-201ENST00000261203 HCLS1P14317 486 aaPredicted RBP11.96□□□□□ -0.49
LIN7A-201ENST00000261203 GOLGA2Q08379 1002 aa11.96□□□□□ -0.49
LIN7A-201ENST00000261203 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
LIN7A-201ENST00000261203 CCDC184Q52MB2 194 aa11.96□□□□□ -0.49
LIN7A-201ENST00000261203 DDX46Q7L014 1031 aaKnown RBP11.96□□□□□ -0.49
LIN7A-201ENST00000261203 ISCA1Q9BUE6 129 aa11.96□□□□□ -0.49
LIN7A-201ENST00000261203 VPS33BQ9H267 617 aa11.96□□□□□ -0.49
LIN7A-201ENST00000261203 LRRC37AA6NMS7 1700 aa11.95□□□□□ -0.5
LIN7A-201ENST00000261203 CCDC30Q5VVM6 783 aa11.95□□□□□ -0.5
LIN7A-201ENST00000261203 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
LIN7A-201ENST00000261203 TMC4Q7Z404 712 aa11.95□□□□□ -0.5
LIN7A-201ENST00000261203 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
LIN7A-201ENST00000261203 GPC2Q8N158 579 aa11.95□□□□□ -0.5
LIN7A-201ENST00000261203 LARGE2Q8N3Y3 721 aa11.95□□□□□ -0.5
LIN7A-201ENST00000261203 SUPT20HQ8NEM7 779 aa11.95□□□□□ -0.5
LIN7A-201ENST00000261203 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms